mRNA_H-elongata_contig141853.2897.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: D7FW04_ECTSI (Magnesium chelatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW04_ECTSI) HSP 1 Score: 228 bits (580), Expect = 1.460e-66 Identity = 107/125 (85.60%), Postives = 115/125 (92.00%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYE 375
T+FSFPPDKGNVGTAAYLDVFGSIHTVL KL+KEGY+VGD P+ R LME ILNDPEA+I+SPEMNV YRMS QEYEELTPYAGDLVENWG+APGHLNSDGQNLLVFG FGN+FIGVQPTFGYE
Sbjct: 546 TIFSFPPDKGNVGTAAYLDVFGSIHTVLSKLKKEGYDVGDLPDDSRALMERILNDPEARIDSPEMNVEYRMSVQEYEELTPYAGDLVENWGKAPGHLNSDGQNLLVFGCKFGNVFIGVQPTFGYE 670
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: A0A7S2K5K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5K2_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.860e-62 Identity = 93/125 (74.40%), Postives = 109/125 (87.20%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYE 375
T+FSFPPDKGNVGTAAYLDVF SI VL +++KEGY++GD P + E+MES+LNDPEAK+ SPE+NVAYRMST EY ELTPYA DL ENWG APG+LNSDGQNL+V+G FGN+FIGVQP+FGYE
Sbjct: 43 TIFSFPPDKGNVGTAAYLDVFDSILAVLKQMKKEGYDIGDAPMSKEEIMESVLNDPEAKVSSPELNVAYRMSTDEYYELTPYATDLEENWGPAPGNLNSDGQNLVVYGKQFGNVFIGVQPSFGYE 167
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: A0A835YVC9_9STRA (Magnesium chelatase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC9_9STRA) HSP 1 Score: 214 bits (546), Expect = 5.560e-62 Identity = 99/125 (79.20%), Postives = 114/125 (91.20%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYE 375
T+FSFPPDKGNVGTAAYLDVFGSIH+V+ +L+ +GY+VGD PET ELM+SILND EA+I+SPEMNVAY+MS +EYEELTPYA DL ENWG+APGHLNSDGQNLL+FG FGN+FIGVQPTFGYE
Sbjct: 537 TIFSFPPDKGNVGTAAYLDVFGSIHSVMRELKAKGYDVGDVPETSEELMDSILNDKEARIDSPEMNVAYKMSVREYEELTPYAADLEENWGKAPGHLNSDGQNLLIFGRKFGNVFIGVQPTFGYE 661
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: A0A1Z5JTK7_FISSO (Magnesium chelatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTK7_FISSO) HSP 1 Score: 201 bits (512), Expect = 2.110e-57 Identity = 92/125 (73.60%), Postives = 110/125 (88.00%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYE 375
T+FSFPPDKGNVGTAAYLDVF SI VL +L+K+GY++GD P+T ++ME++LNDPEA+I SPE+NVAYRMST EY ELTPYA DL ENWG APG+LNSDGQNL+V+G FGN+FIGVQP+FGYE
Sbjct: 516 TIFSFPPDKGNVGTAAYLDVFDSIKAVLAELKKQGYDIGDAPDTKEQIMEAVLNDPEARISSPELNVAYRMSTDEYYELTPYAKDLEENWGPAPGNLNSDGQNLVVYGKQFGNVFIGVQPSFGYE 640
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: A0A448ZEK5_9STRA (Magnesium chelatase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZEK5_9STRA) HSP 1 Score: 201 bits (511), Expect = 2.870e-57 Identity = 93/125 (74.40%), Postives = 109/125 (87.20%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYE 375
T+FSFPPDKGNVGTAAYLDVF SI VL +L+ EGY+VGD PET E+ME++LNDPEA+I SPE+NV YRMST+EY +LTPYA DL ENWG APG+LNSDGQNL+V+G FGN+FIGVQP+FGYE
Sbjct: 526 TIFSFPPDKGNVGTAAYLDVFDSIQAVLKQLKSEGYDVGDAPETKEEIMEAVLNDPEARISSPELNVEYRMSTEEYYDLTPYATDLEENWGPAPGNLNSDGQNLVVYGKKFGNVFIGVQPSFGYE 650
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: A0A7S0F6H0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F6H0_9EUKA) HSP 1 Score: 189 bits (479), Expect = 3.470e-57 Identity = 89/125 (71.20%), Postives = 106/125 (84.80%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYE 375
TVFSFPPDKGNVGTAAYL+VFGSI+ L L+KEGYEVG+ PE+ L++ IL+D EA+I SPE+N+AY+M+ EY+ELTPYA DL ENWG PG+LNSDGQNLLV+G FGNIFIGVQP+FGYE
Sbjct: 122 TVFSFPPDKGNVGTAAYLNVFGSIYEALGNLKKEGYEVGELPESVEALVDEILHDKEARIASPELNIAYKMTVPEYKELTPYATDLEENWGPPPGNLNSDGQNLLVYGKTFGNIFIGVQPSFGYE 246
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: A0A7S3LF30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LF30_9STRA) HSP 1 Score: 191 bits (486), Expect = 6.730e-57 Identity = 91/125 (72.80%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYE 375
T+FSFPPDKGNVGTAAYLDVF SI VL +L+ EGY++GD P +M SIL+DPEAKI SP++NVAYRMST EY +LTPYA DL ENWG APG+LNSDGQNLLV+G FGN+FIGVQP+FGYE
Sbjct: 114 TIFSFPPDKGNVGTAAYLDVFDSIKAVLGQLKSEGYDIGDAPMDKEAIMGSILDDPEAKISSPDLNVAYRMSTSEYYDLTPYATDLEENWGPAPGNLNSDGQNLLVYGKQFGNVFIGVQPSFGYE 238
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: A0A1C0V430_9CYAN (Magnesium chelatase n=5 Tax=Limnothrix TaxID=132605 RepID=A0A1C0V430_9CYAN) HSP 1 Score: 198 bits (504), Expect = 2.510e-56 Identity = 95/132 (71.97%), Postives = 111/132 (84.09%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYEVRADFLL 396
TVFSFPPDKGNVGTAAYLDVFGSIH VL L++EGY+V D PE+P+ELME++L D +A+ SPE+NVAYRMS EYE+LTPY+ L ENWG+ PG+LNSDGQNLLVFG +FGN+FIGVQPTFGYE LL
Sbjct: 463 TVFSFPPDKGNVGTAAYLDVFGSIHEVLQGLKREGYDVQDVPESPKELMEAVLKDAQAQYASPELNVAYRMSVPEYEKLTPYSKKLEENWGKPPGNLNSDGQNLLVFGKHFGNVFIGVQPTFGYEGDPMLLL 594
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: A0A1E7FIS1_9STRA (Magnesium chelatase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FIS1_9STRA) HSP 1 Score: 197 bits (502), Expect = 4.680e-56 Identity = 91/125 (72.80%), Postives = 107/125 (85.60%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYE 375
T+FSFPPDKGNVGTAAYLDVF SI VL +L+ EGY++GD P T E+ME+ILNDPEAKI SPE+N+ Y+MST+EY LTPYA DL ENWG APG+LNSDGQNL+V+G FGN+FIGVQP+FGYE
Sbjct: 525 TIFSFPPDKGNVGTAAYLDVFNSIQAVLGQLKSEGYDIGDAPNTKEEIMEAILNDPEAKINSPELNIEYKMSTEEYYNLTPYAKDLEENWGPAPGNLNSDGQNLVVYGKKFGNVFIGVQPSFGYE 649
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Match: K0T806_THAOC (Magnesium chelatase n=5 Tax=Coscinodiscophyceae TaxID=33836 RepID=K0T806_THAOC) HSP 1 Score: 197 bits (501), Expect = 6.380e-56 Identity = 92/125 (73.60%), Postives = 108/125 (86.40%), Query Frame = 1
Query: 1 TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMESILNDPEAKIESPEMNVAYRMSTQEYEELTPYAGDLVENWGQAPGHLNSDGQNLLVFGVNFGNIFIGVQPTFGYE 375
T+FSFPPDKGNVGTAAYLDVF SI VL +L+ EGY+VGD P++ +MES+LNDPEA+I SPE+NVAYRM+T EY ELTPYA DL ENWG APG+LNSDGQNL+V+G FGN+FIGVQP+FGYE
Sbjct: 529 TIFSFPPDKGNVGTAAYLDVFDSIKAVLKQLKSEGYDVGDAPDSKELIMESVLNDPEARINSPELNVAYRMNTDEYYELTPYAKDLEENWGPAPGNLNSDGQNLVVYGKQFGNVFIGVQPSFGYE 653 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141853.2897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig141853.2897.1 >prot_H-elongata_contig141853.2897.1 ID=prot_H-elongata_contig141853.2897.1|Name=mRNA_H-elongata_contig141853.2897.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp TVFSFPPDKGNVGTAAYLDVFGSIHTVLLKLRKEGYEVGDFPETPRELMEback to top mRNA from alignment at H-elongata_contig141853:172..1398+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig141853.2897.1 ID=mRNA_H-elongata_contig141853.2897.1|Name=mRNA_H-elongata_contig141853.2897.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1227bp|location=Sequence derived from alignment at H-elongata_contig141853:172..1398+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig141853:172..1398+ >mRNA_H-elongata_contig141853.2897.1 ID=mRNA_H-elongata_contig141853.2897.1|Name=mRNA_H-elongata_contig141853.2897.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at H-elongata_contig141853:172..1398+ (Himanthalia elongata Himel1 dioecious)back to top |