prot_H-elongata_contig14106.2845.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14106.2845.1
Unique Nameprot_H-elongata_contig14106.2845.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length158
Homology
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: D7FKW4_ECTSI (Chloroplast 50S ribosomal protein L15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW4_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 7.830e-71
Identity = 110/135 (81.48%), Postives = 119/135 (88.15%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLIMENYEEDE 135
            MRGQKSRSGP VRAGFEGGQ PLYRRLPK VG PMGPGHTKKQFNLIKL+ALN ++ G+TVNFESL AAG VTKTK+RWHKVVGG EL  T LTVQAHGFTKSAV+AIE KGGKCQLLSPTTN+VL M+  EE+E
Sbjct:   99 MRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRAAGKVTKTKHRWHKVVGGMELETTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSMDEEEEEE 233          
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A836CHQ3_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ3_9STRA)

HSP 1 Score: 189 bits (480), Expect = 5.130e-58
Identity = 92/128 (71.88%), Postives = 104/128 (81.25%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLIM 128
            MRGQ+SRSGP VRAGFEGGQ PLYRRLPK VG PMGPGHTKK+F+LI LEALNS   GSTV+FE+L   G +TKT  +WHKVVG  EL   +LTVQAH FT SA +AIEG GGKCQLLSPTTN+++ M
Sbjct:   98 MRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGSTVSFETLHEQGTLTKTSLKWHKVVGNGELNVKNLTVQAHAFTGSAKEAIEGAGGKCQLLSPTTNEIVDM 225          
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A835Z4H5_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H5_9STRA)

HSP 1 Score: 186 bits (472), Expect = 8.120e-57
Identity = 91/128 (71.09%), Postives = 102/128 (79.69%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLIM 128
            MRGQ+SRSGP VRAGFEGGQ PLYRRLPK VG PMGPGHTKK+F+LI LEALNS   G+TV+FE+L   G +TKT  RWHKVVG  EL    LTVQAH FT SA +AIE  GGKCQLLSPTTN+++ M
Sbjct:   97 MRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDM 224          
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A1E7FLQ7_9STRA (Ribosomal protein L15 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLQ7_9STRA)

HSP 1 Score: 176 bits (446), Expect = 9.500e-53
Identity = 86/128 (67.19%), Postives = 102/128 (79.69%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHK-VVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLI 127
            MRGQKSRSG   R GFEGGQTPLYRRLPK  G PMGPGH+KKQ+N+IKL+ LN+V++GS  NFESLF AG VTK+KY  HK VVG D+  A D+TVQAH FTK+A  AIE  GGKC+LL P+T +V++
Sbjct:  104 MRGQKSRSGRPTRPGFEGGQTPLYRRLPKFTGRPMGPGHSKKQYNIIKLDQLNNVDSGSVCNFESLFTAGSVTKSKYDTHKIVVGKDDFTAKDITVQAHAFTKTARTAIEDAGGKCELLKPSTGEVIV 231          
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A448ZNF8_9STRA (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNF8_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.160e-51
Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVV-GGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVL 126
            MRGQKSRSG   R GFEGGQ PLYRRLPK  G PMGPGHTKK++NLI+L+ALN V  GST NFESLF +  VTK+K+  HKVV G +E  A D+TVQAH FTKSA  AIEG GGKC+LL P+T +V+
Sbjct:   96 MRGQKSRSGRPTRPGFEGGQQPLYRRLPKFTGRPMGPGHTKKEYNLIQLDALNGVAPGSTCNFESLFESKAVTKSKHSTHKVVVGREEFTAKDITVQAHAFTKSARAAIEGAGGKCELLKPSTGEVI 222          
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A7S3L4I4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4I4_9STRA)

HSP 1 Score: 169 bits (428), Expect = 4.200e-50
Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGG---DELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLI 127
            MRGQKSR+G   R GFEGGQTPLYRRLPK VG P GPGHTK  +N I  + L  V+AGSTVNFE L  +G++TK+KY  HK+VGG   D  ++++LTVQAHGFT +A  AIEG GGKC++LSPTT +VL+
Sbjct:   99 MRGQKSRAGRPTRPGFEGGQTPLYRRLPKFVGKPTGPGHTKTIYNTISTDVLQKVDAGSTVNFEGLLESGLITKSKYSIHKIVGGKNTDGAISSNLTVQAHGFTSAARTAIEGAGGKCEVLSPTTGQVLV 228          
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: R7QRC1_CHOCR (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRC1_CHOCR)

HSP 1 Score: 169 bits (429), Expect = 5.470e-50
Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLIMENYEEDE 135
            MRGQKSRSG  VR GFEGGQTPLYRR+PK VG PMGPGH K ++ L+K+E LN  E GS V FE L A GI+TK K + +KVVGG++L   +LTV+AH FT SAV AIEG GG C L+SPTT K ++ E  E++E
Sbjct:  103 MRGQKSRSGRGVRPGFEGGQTPLYRRIPKFVGRPMGPGHKKTEYALMKIEFLNGCEEGSVVTFEGLKAMGIMTKQKRKIYKVVGGEDLTVKNLTVKAHAFTTSAVDAIEGAGGTCVLVSPTTGKDIVFEEEEDEE 237          
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A8J9X6P0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X6P0_PHATR)

HSP 1 Score: 166 bits (421), Expect = 7.120e-50
Identity = 82/128 (64.06%), Postives = 101/128 (78.91%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVV--GGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVL 126
            MRGQKSRSG   R+GFEGGQTPLYRRLPK VG   GPGHTK  +N+I  ++L   ++GSTV+FESL   G++TK+K++ HKVV   G+  +A++LTVQAHGFTKSA  AIE  GGKC++LSPTTNKVL
Sbjct:   37 MRGQKSRSGRPTRSGFEGGQTPLYRRLPKFVGRATGPGHTKTIYNIISTDSLEKAQSGSTVSFESLLENGLITKSKFKLHKVVLGKGESAVASNLTVQAHGFTKSAQAAIESAGGKCEVLSPTTNKVL 164          
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A7S1H2P5_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2P5_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.250e-48
Identity = 84/127 (66.14%), Postives = 95/127 (74.80%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVV-GGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVL 126
            MRGQKSRSG   R GFEGGQTPLYRRLPK VG P+GPGHTK  +NLIKL  +NS E GST NFESL  +GI TK++Y  HKVV G DE  A D+TVQAH FT +A  AIE  GGKC+LL  TT +V+
Sbjct:   99 MRGQKSRSGRPERPGFEGGQTPLYRRLPKFVGKPLGPGHTKTVYNLIKLNQINSAEPGSTCNFESLLESGIATKSRYPIHKVVVGNDEFTAKDVTVQAHAFTAAARAAIENAGGKCELLKRTTGEVI 225          
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A7S1BE32_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BE32_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.540e-48
Identity = 85/127 (66.93%), Postives = 92/127 (72.44%), Query Frame = 0
Query:    1 MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGD-ELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVL 126
            MRGQK RSG   RAGFEGGQ PLYRRLPK VG PMGPGH+K  +NLIK + +N    GSTV+F SLF AG VTK KY  HKVV G  E  A  +TVQAH FT SA  AIEG GGKC+LLSPTT  VL
Sbjct:    5 MRGQKGRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKTDEINGAAEGSTVSFGSLFEAGGVTKAKYGIHKVVTGKKEFSAKGVTVQAHAFTNSARAAIEGAGGKCELLSPTTGAVL 131          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW4_ECTSI7.830e-7181.48Chloroplast 50S ribosomal protein L15 n=1 Tax=Ecto... [more]
A0A836CHQ3_9STRA5.130e-5871.88Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A835Z4H5_9STRA8.120e-5771.09Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A1E7FLQ7_9STRA9.500e-5367.19Ribosomal protein L15 n=1 Tax=Fragilariopsis cylin... [more]
A0A448ZNF8_9STRA6.160e-5167.72Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A7S3L4I4_9STRA4.200e-5063.08Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
R7QRC1_CHOCR5.470e-5062.22Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A8J9X6P0_PHATR7.120e-5064.06Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A7S1H2P5_9STRA1.250e-4866.14Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S1BE32_9STRA2.540e-4866.93Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.100.10.10coord: 39..119
e-value: 6.1E-15
score: 57.0
NoneNo IPR availablePANTHERPTHR12934:SF1154S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 1..136
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 2..116
e-value: 3.4E-23
score: 82.7
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMTIGR01071TIGR01071coord: 1..115
e-value: 2.0E-24
score: 84.0
IPR005749Ribosomal protein L15, bacterial-typePANTHERPTHR1293450S RIBOSOMAL PROTEIN L15coord: 1..136
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14106contigH-elongata_contig14106:5741..7684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14106.2845.1mRNA_H-elongata_contig14106.2845.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14106 5626..8126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14106.2845.1 ID=prot_H-elongata_contig14106.2845.1|Name=mRNA_H-elongata_contig14106.2845.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLE
ALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGF
TKSAVQAIEGKGGKCQLLSPTTNKVLIMENYEEDEDEGDTAEIDTDADTA
ESTDKSE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021131Ribosomal_L18e/L15P
IPR005749Ribosomal_L15_bac-type
IPR036227L18e/L15P_sf