mRNA_H-elongata_contig14106.2845.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14106.2845.1
Unique NamemRNA_H-elongata_contig14106.2845.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: D7FKW4_ECTSI (Chloroplast 50S ribosomal protein L15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW4_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 5.410e-92
Identity = 142/173 (82.08%), Postives = 154/173 (89.02%), Query Frame = 2 
Query:    2 VLEEVRVDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLIMENYEEDE 520
            VL+ V VDTLK +PGSR+RHKRKGRGIAAGQGASCGFGMRGQKSRSGP VRAGFEGGQ PLYRRLPK VG PMGPGHTKKQFNLIKL+ALN ++ G+TVNFESL AAG VTKTK+RWHKVVGG EL  T LTVQAHGFTKSAV+AIE KGGKCQLLSPTTN+VL M+  EE+E
Sbjct:   61 VLDRVAVDTLKPAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRAAGKVTKTKHRWHKVVGGMELETTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSMDEEEEEE 233
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BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A836CHQ3_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ3_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.400e-72
Identity = 117/165 (70.91%), Postives = 133/165 (80.61%), Query Frame = 2 
Query:    5 LEEVRVDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLIM 499
            ++E+   TL  SPGSR R  RKGRGI+AGQGASCGFGMRGQ+SRSGP VRAGFEGGQ PLYRRLPK VG PMGPGHTKK+F+LI LEALNS   GSTV+FE+L   G +TKT  +WHKVVG  EL   +LTVQAH FT SA +AIEG GGKCQLLSPTTN+++ M
Sbjct:   61 VKELSPATLVPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGSTVSFETLHEQGTLTKTSLKWHKVVGNGELNVKNLTVQAHAFTGSAKEAIEGAGGKCQLLSPTTNEIVDM 225
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BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A835Z4H5_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H5_9STRA)

HSP 1 Score: 230 bits (586), Expect = 3.090e-71
Identity = 116/163 (71.17%), Postives = 129/163 (79.14%), Query Frame = 2 
Query:   11 EVRVDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLIM 499
            E+   TL  SPGSR R  RKGRGI+AGQGASCGFGMRGQ+SRSGP VRAGFEGGQ PLYRRLPK VG PMGPGHTKK+F+LI LEALNS   G+TV+FE+L   G +TKT  RWHKVVG  EL    LTVQAH FT SA +AIE  GGKCQLLSPTTN+++ M
Sbjct:   62 ELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDM 224
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BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A1E7FLQ7_9STRA (Ribosomal protein L15 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLQ7_9STRA)

HSP 1 Score: 222 bits (565), Expect = 6.240e-68
Identity = 110/163 (67.48%), Postives = 130/163 (79.75%), Query Frame = 2 
Query:   11 EVRVDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHK-VVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLI 496
            E  +D L+ +PGSRK   RKGRGIAAGQGA+CGFGMRGQKSRSG   R GFEGGQTPLYRRLPK  G PMGPGH+KKQ+N+IKL+ LN+V++GS  NFESLF AG VTK+KY  HK VVG D+  A D+TVQAH FTK+A  AIE  GGKC+LL P+T +V++
Sbjct:   69 EFTLDNLRPAPGSRKSRTRKGRGIAAGQGATCGFGMRGQKSRSGRPTRPGFEGGQTPLYRRLPKFTGRPMGPGHSKKQYNIIKLDQLNNVDSGSVCNFESLFTAGSVTKSKYDTHKIVVGKDDFTAKDITVQAHAFTKTARTAIEDAGGKCELLKPSTGEVIV 231
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BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A448ZNF8_9STRA (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNF8_9STRA)

HSP 1 Score: 217 bits (552), Expect = 3.850e-66
Identity = 109/162 (67.28%), Postives = 129/162 (79.63%), Query Frame = 2 
Query:   11 EVRVDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVV-GGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVL 493
            E  +D+L+ +PGSRK+  RKGRGI+AGQGA+CGFGMRGQKSRSG   R GFEGGQ PLYRRLPK  G PMGPGHTKK++NLI+L+ALN V  GST NFESLF +  VTK+K+  HKVV G +E  A D+TVQAH FTKSA  AIEG GGKC+LL P+T +V+
Sbjct:   61 EFTLDSLRPAPGSRKKKTRKGRGISAGQGATCGFGMRGQKSRSGRPTRPGFEGGQQPLYRRLPKFTGRPMGPGHTKKEYNLIQLDALNGVAPGSTCNFESLFESKAVTKSKHSTHKVVVGREEFTAKDITVQAHAFTKSARAAIEGAGGKCELLKPSTGEVI 222
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BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A8J9X6P0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X6P0_PHATR)

HSP 1 Score: 214 bits (545), Expect = 6.830e-66
Identity = 107/163 (65.64%), Postives = 130/163 (79.75%), Query Frame = 2 
Query:   11 EVRVDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVV--GGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVL 493
            E  +D LK +PGSR+  KRKGRGIAAGQGA+CGFGMRGQKSRSG   R+GFEGGQTPLYRRLPK VG   GPGHTK  +N+I  ++L   ++GSTV+FESL   G++TK+K++ HKVV   G+  +A++LTVQAHGFTKSA  AIE  GGKC++LSPTTNKVL
Sbjct:    2 EFTLDNLKPAPGSRQNKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRSGFEGGQTPLYRRLPKFVGRATGPGHTKTIYNIISTDSLEKAQSGSTVSFESLLENGLITKSKFKLHKVVLGKGESAVASNLTVQAHGFTKSAQAAIESAGGKCEVLSPTTNKVL 164
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BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A7S1H2P5_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2P5_9STRA)

HSP 1 Score: 215 bits (548), Expect = 1.690e-65
Identity = 110/159 (69.18%), Postives = 125/159 (78.62%), Query Frame = 2 
Query:   20 VDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVV-GGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVL 493
            V+T+K +PGSRKR KRKGRGIAAGQGA+CGFGMRGQKSRSG   R GFEGGQTPLYRRLPK VG P+GPGHTK  +NLIKL  +NS E GST NFESL  +GI TK++Y  HKVV G DE  A D+TVQAH FT +A  AIE  GGKC+LL  TT +V+
Sbjct:   67 VNTVKPAPGSRKRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPERPGFEGGQTPLYRRLPKFVGKPLGPGHTKTVYNLIKLNQINSAEPGSTCNFESLLESGIATKSRYPIHKVVVGNDEFTAKDVTVQAHAFTAAARAAIENAGGKCELLKRTTGEVI 225
[Close]
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A7S3L4I4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4I4_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.110e-64
Identity = 106/165 (64.24%), Postives = 128/165 (77.58%), Query Frame = 2 
Query:   11 EVRVDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGG---DELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLI 496
            E  + TLK +PGSRK   RKGRGIAAGQGA+CG+GMRGQKSR+G   R GFEGGQTPLYRRLPK VG P GPGHTK  +N I  + L  V+AGSTVNFE L  +G++TK+KY  HK+VGG   D  ++++LTVQAHGFT +A  AIEG GGKC++LSPTT +VL+
Sbjct:   64 EWTLATLKAAPGSRKPKTRKGRGIAAGQGATCGYGMRGQKSRAGRPTRPGFEGGQTPLYRRLPKFVGKPTGPGHTKTIYNTISTDVLQKVDAGSTVNFEGLLESGLITKSKYSIHKIVGGKNTDGAISSNLTVQAHGFTSAARTAIEGAGGKCEVLSPTTGQVLV 228
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BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: R7QRC1_CHOCR (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRC1_CHOCR)

HSP 1 Score: 213 bits (542), Expect = 2.890e-64
Identity = 112/184 (60.87%), Postives = 138/184 (75.00%), Query Frame = 2 
Query:   20 VDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVLIMENYEEDEDEGDTAEIDTDADTAES 571
            +  L+ +PGSRKR KRKGRG +AGQG SCGFGMRGQKSRSG  VR GFEGGQTPLYRR+PK VG PMGPGH K ++ L+K+E LN  E GS V FE L A GI+TK K + +KVVGG++L   +LTV+AH FT SAV AIEG GG C L+SPTT K ++   +EE+EDE    E+ T+++T E+
Sbjct:   71 LTNLRPAPGSRKRKKRKGRGHSAGQGGSCGFGMRGQKSRSGRGVRPGFEGGQTPLYRRIPKFVGRPMGPGHKKTEYALMKIEFLNGCEEGSVVTFEGLKAMGIMTKQKRKIYKVVGGEDLTVKNLTVKAHAFTTSAVDAIEGAGGTCVLVSPTTGKDIV---FEEEEDE----EVATESETEEA 247
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BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Match: A0A7S1BKP2_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKP2_9STRA)

HSP 1 Score: 211 bits (537), Expect = 7.660e-64
Identity = 111/159 (69.81%), Postives = 121/159 (76.10%), Query Frame = 2 
Query:   20 VDTLKTSPGSRKRHKRKGRGIAAGQGASCGFGMRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLEALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGD-ELMATDLTVQAHGFTKSAVQAIEGKGGKCQLLSPTTNKVL 493
            +D LK +PGSR R KRKGRGIAAGQGA+CGFGMRGQKSRSG   RAGFEGGQ PLYRRLPK VG PMGPGH+K  +NLIKL+ LN    GSTVNF SLF +G +TK+K   HKVV G  E  A  L VQAH FT SA  AIEG GGKC+LLSPTT  VL
Sbjct:   64 LDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKLDELNGAAEGSTVNFASLFESGDITKSKVGIHKVVTGKKEFTAKGLIVQAHAFTSSAQTAIEGAGGKCELLSPTTGAVL 222
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14106.2845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW4_ECTSI5.410e-9282.08Chloroplast 50S ribosomal protein L15 n=1 Tax=Ecto... [more]
A0A836CHQ3_9STRA1.400e-7270.91Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A835Z4H5_9STRA3.090e-7171.17Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A1E7FLQ7_9STRA6.240e-6867.48Ribosomal protein L15 n=1 Tax=Fragilariopsis cylin... [more]
A0A448ZNF8_9STRA3.850e-6667.28Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A8J9X6P0_PHATR6.830e-6665.64Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A7S1H2P5_9STRA1.690e-6569.18Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S3L4I4_9STRA2.110e-6464.24Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
R7QRC1_CHOCR2.890e-6460.87Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A7S1BKP2_9STRA7.660e-6469.81Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14106contigH-elongata_contig14106:5626..8126 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.1
Seed ortholog evalue3.7e-55
Seed eggNOG ortholog2880.D7FKW4
Preferred namePRPL15
KEGG koko:K02876
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
GOsGO:0000311,GO:0000313,GO:0000315,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009547,GO:0009570,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0010467,GO:0015934,GO:0019538,GO:0031967,GO:0031975,GO:0032991,GO:0034641,GO:0034645,GO:0042221,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0200@1,KOG0846@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Hectar predicted targeting categoryother localisation
Ec32 ortholog description50S ribosomal protein L15, chloroplast
Ec32 orthologEc-17_001600.1
Exons4
Model size1031
Cds size474
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14106.2845.1prot_H-elongata_contig14106.2845.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14106 5741..7684 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929838.4233863-UTR-H-elongata_contig14106:5625..57401622929838.4233863-UTR-H-elongata_contig14106:5625..5740Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14106 5626..5740 +
1691679178.1065328-UTR-H-elongata_contig14106:5625..57401691679178.1065328-UTR-H-elongata_contig14106:5625..5740Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14106 5626..5740 +
1622929838.5094662-UTR-H-elongata_contig14106:7684..81261622929838.5094662-UTR-H-elongata_contig14106:7684..8126Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14106 7685..8126 +
1691679178.160439-UTR-H-elongata_contig14106:7684..81261691679178.160439-UTR-H-elongata_contig14106:7684..8126Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14106 7685..8126 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929838.440541-CDS-H-elongata_contig14106:5740..58661622929838.440541-CDS-H-elongata_contig14106:5740..5866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14106 5741..5866 +
1691679178.1266894-CDS-H-elongata_contig14106:5740..58661691679178.1266894-CDS-H-elongata_contig14106:5740..5866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14106 5741..5866 +
1622929838.4608188-CDS-H-elongata_contig14106:6877..69591622929838.4608188-CDS-H-elongata_contig14106:6877..6959Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14106 6878..6959 +
1691679178.13694-CDS-H-elongata_contig14106:6877..69591691679178.13694-CDS-H-elongata_contig14106:6877..6959Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14106 6878..6959 +
1622929838.4758031-CDS-H-elongata_contig14106:7193..72731622929838.4758031-CDS-H-elongata_contig14106:7193..7273Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14106 7194..7273 +
1691679178.1446354-CDS-H-elongata_contig14106:7193..72731691679178.1446354-CDS-H-elongata_contig14106:7193..7273Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14106 7194..7273 +
1622929838.491869-CDS-H-elongata_contig14106:7498..76841622929838.491869-CDS-H-elongata_contig14106:7498..7684Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14106 7499..7684 +
1691679178.152395-CDS-H-elongata_contig14106:7498..76841691679178.152395-CDS-H-elongata_contig14106:7498..7684Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14106 7499..7684 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14106.2845.1

>prot_H-elongata_contig14106.2845.1 ID=prot_H-elongata_contig14106.2845.1|Name=mRNA_H-elongata_contig14106.2845.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
MRGQKSRSGPSVRAGFEGGQTPLYRRLPKRVGSPMGPGHTKKQFNLIKLE
ALNSVEAGSTVNFESLFAAGIVTKTKYRWHKVVGGDELMATDLTVQAHGF
TKSAVQAIEGKGGKCQLLSPTTNKVLIMENYEEDEDEGDTAEIDTDADTA
ESTDKSE*
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mRNA from alignment at H-elongata_contig14106:5626..8126+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14106.2845.1 ID=mRNA_H-elongata_contig14106.2845.1|Name=mRNA_H-elongata_contig14106.2845.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2501bp|location=Sequence derived from alignment at H-elongata_contig14106:5626..8126+ (Himanthalia elongata Himel1 dioecious)
AGTTCTCGAGGAAGTTCGGGTCGACACGCTAAAGACATCACCAGGTTCGC
GGAAACGCCACAAGCGGAAGGGGCGCGGTATCGCTGCAGGTCAAGGGGCA
TCGTGCGGATTTGGAATGAGAGGGCAGAAATCCCGTTCTGGCCCAAGCGT
ACGAGCAGGATTCGAGGGAGGGCAAACGCCACTCTACAGGCGACTCCCGA
AGCGGGTCGGCAGTCCCATGGGCCCCGGTCACACGAAGAAGGTCAGCACT
GATAGAAGAACATACGTAAAAGACTAAACTAGACGAAACGTTATTTACTA
GGGTTGTGTATTGGTACCAATATATATTATTACATCAGTTATTGGTATCG
ACAAATCCTCACCGATATTTTTACCAATATATTAGGGGGGGCGTGAATCG
TAAAAGCGCGTATGGATGTGACAGTCCCGTGGCCCCCGTACACAGCTGTA
GACCACGAGCCCACACCTACAGCTCTCAATGTCTAACGATGGAGAGGCTG
CGCACGGTTTTGAACCCCGCTGCCGCCACCAGCGGGGGGGGCCAGCAAAC
TAAGAAAGAAAAAAAGATTGAGAGAATCAAGACAGTGCCCAAGCTCTCGA
AGTCCGCGAATGCCTCGAACCCTGTGTGGCGGTACTACCAAGTGTACATC
GAACTCAAGTACGCAGGGCTTGTTATTTGCAAGCTGTGCGTTAAAAGCGA
AAGGTTTGGCTCTGCAGAGGTCAAGTTCGGGAGAGGGTCGCCAACAAATC
TCACGACCCATCTCAAAACGAATAGGGTTGGTTGTGTATTGGTACCAATA
TATATATGCTCTAGCTCTATATCGAATATAGAGCTAGAGGGACAAACATT
TCGAAAATGTCTTATTTCCTTCATTCCTTATTTAAGTATAAATATGTATA
TATAGGGGAATGCTTGGGGAGGAGACGGGGCAAACAAGGTTTTGATTAGT
AAAGGCGATGTTATGTGATCAATGTGGTATTTATTAAAGTATATAAGCAT
AGACGAGTGCAGTGCCAGATTAGATATTAGTAGACAATCGCATCCGCAGC
CAACCCTACTGAAGTATAGTGTCAACAGGAGTGTAAAGAAAGCCTAGCGA
GCGACGCACACTGAAATGCAACGTCGTCCAATAATATCCATATGGGTTCA
GGACAGCCAAGATTATACGTAGTAATAAATTGAGGTGCTACTCGTGAAAT
TGTCAGCCCCGCCAACACTTGAACCATGTCTATATCATTCCCTTTATGGC
AGCAATTTAACCTCATCAAGTTGGAAGCTCTCAACTCTGTTGAGGCTGGA
TCCACCGTAAACTTCGAATCGCTATTCGCAGCCGGTAAGTGGGTTTAAGC
TCTCATGCTTAGTCGATGTCAGCTTTTGCAGTATTGCAGTATAGCCGAGA
GCTAGTAATAGCCCATTAGACTAGTAGTAGTAATAGTAATTATAGACAAT
TGTAAAAATGCTGCACACCCTCTGCTTGGAGATTTTTTAGTAAATAGCTA
GATGTTGGGTATTTAGTAGTTACCCTTCCTTCCTATGTTTCGCTGTCATT
CTCCACTTCTATGAATAGGTATAGTTACCAAGACCAAATACAGGTGGCAC
AAAGTTGTCGGTGGCGACGAATTGATGGCAACCGACCTCACAGTCCAGGT
ACGCTCGTTTGATAAACATGACCCGTCGCTGCCAATTCAATGCAAGCACC
TTGTTAGGGGCGTCTGCAATCTAGCGTCCCCTCGTACCTACTAATATCAG
ACTGCTGTACTATAGGGTAATAAGGAATTAGTAGTAGTAGTAGTAGATGC
TTTTTTACCGCACCGCATCGAAACATAGTGTTTACAATGCTGACTGCGTA
TACTACGCGGTGTGACTTCACAGGCCCATGGGTTCACTAAGAGCGCCGTG
CAGGCTATTGAAGGCAAGGGGGGCAAGTGCCAACTCTTATCTCCAACAAC
GAACAAAGTTTTGATTATGGAGAATTATGAGGAAGATGAAGATGAAGGGG
ATACCGCGGAAATCGATACTGATGCCGACACCGCCGAGAGTACTGATAAA
TCAGAATAATAAATAATTGAGTTATCTTACCGGGCTGGGTGAGGGATGAT
GACGGATGAAATAGCAGTTTAGTCCATCTGGAAAGGTATATGGTATGGTA
TACCTGAATTATGGTTATTTGGGCAGGTCGTTACGGGGTCGCTGATTGAC
AGTTTTGCTGCTGACGAAAGGGATGCTTGAGATTGATTCTTGAACTGACG
CAGGCAGCAATGCCAATGTCAACGTCGAGGAATAAATGCGATAATGAGAA
ACAATTATAGAACAGCATACTCCCTTGGAATGTTGAATTTTATCGACGAT
GGGCATATTTCCAAAAGTTTTCTGTAATTTCATCGTCTTTAATACGCTCG
CCGAAGAAAGATGAACCATACGTGCAAGCGCCGGTGATGGCGATGGTATT
TTTTTTTTTTTTTTTTTTTTTTTTAATTAATCTTTTTTTACCTCCAGTTT
T
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Coding sequence (CDS) from alignment at H-elongata_contig14106:5626..8126+

>mRNA_H-elongata_contig14106.2845.1 ID=mRNA_H-elongata_contig14106.2845.1|Name=mRNA_H-elongata_contig14106.2845.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=948bp|location=Sequence derived from alignment at H-elongata_contig14106:5626..8126+ (Himanthalia elongata Himel1 dioecious)
ATGAGAGGGCAGAAATCCCGTTCTGGCCCAAGCGTACGAGCAGGATTCGA
GGGAGGGCAAACGCCACTCTACAGGCGACTCCCGAAGCGGGTCGGCAGTC
CCATGGGCCCCGGTCACACGAAGAAGATGAGAGGGCAGAAATCCCGTTCT
GGCCCAAGCGTACGAGCAGGATTCGAGGGAGGGCAAACGCCACTCTACAG
GCGACTCCCGAAGCGGGTCGGCAGTCCCATGGGCCCCGGTCACACGAAGA
AGCAATTTAACCTCATCAAGTTGGAAGCTCTCAACTCTGTTGAGGCTGGA
TCCACCGTAAACTTCGAATCGCTATTCGCAGCCGCAATTTAACCTCATCA
AGTTGGAAGCTCTCAACTCTGTTGAGGCTGGATCCACCGTAAACTTCGAA
TCGCTATTCGCAGCCGGTATAGTTACCAAGACCAAATACAGGTGGCACAA
AGTTGTCGGTGGCGACGAATTGATGGCAACCGACCTCACAGTCCAGGTAT
AGTTACCAAGACCAAATACAGGTGGCACAAAGTTGTCGGTGGCGACGAAT
TGATGGCAACCGACCTCACAGTCCAGGCCCATGGGTTCACTAAGAGCGCC
GTGCAGGCTATTGAAGGCAAGGGGGGCAAGTGCCAACTCTTATCTCCAAC
AACGAACAAAGTTTTGATTATGGAGAATTATGAGGAAGATGAAGATGAAG
GGGATACCGCGGAAATCGATACTGATGCCGACACCGCCGAGAGTACTGAT
AAATCAGAATAAGCCCATGGGTTCACTAAGAGCGCCGTGCAGGCTATTGA
AGGCAAGGGGGGCAAGTGCCAACTCTTATCTCCAACAACGAACAAAGTTT
TGATTATGGAGAATTATGAGGAAGATGAAGATGAAGGGGATACCGCGGAA
ATCGATACTGATGCCGACACCGCCGAGAGTACTGATAAATCAGAATAA
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