mRNA_H-elongata_contig14098.2840.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: D7G6Y8_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y8_ECTSI) HSP 1 Score: 299 bits (765), Expect = 2.440e-90 Identity = 159/256 (62.11%), Postives = 171/256 (66.80%), Query Frame = 3
Query: 3 MVRAIYDENSELRQSS-FLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHIGK---------------------------------------------------------------GGGKGDGMGHILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAASTMLDKMYKRVLETKKGWGHFIPGRRRYEV 578
MVRAIYDENSELRQSS LG+EDLKKEDLGLL YY SFGFPYLLDL GTIRSSTD+GDLWYREYHLELTKE+QFPIEMS PWI+ EHI K G G MGH+LVEE+LWALD+YNDAAH ALYVLNSQYLFNEIQAEVNLVFKQLLFDLE EVFGYFKDWAAST+LDK +K+V E ++G GHFIPGRRRYE
Sbjct: 574 MVRAIYDENSELRQSSGVLGREDLKKEDLGLLRTYYEQSFGFPYLLDLGGTIRSSTDLGDLWYREYHLELTKEIQFPIEMSFPWIITEHIVKTKRAMAIGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGGEMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFKQLLFDLEAEVFGYFKDWAASTVLDKAFKKVYEIRRGLGHFIPGRRRYET 829
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: A0A6H5KQX8_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX8_9PHAE) HSP 1 Score: 292 bits (747), Expect = 6.450e-88 Identity = 156/252 (61.90%), Postives = 168/252 (66.67%), Query Frame = 3
Query: 3 MVRAIYDENSELRQSS-FLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHIGK-----------------------------------------------------------GGGKGDGMGHILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAASTMLDKMYKRVLETKKGWGHFIPGRRRYEV 578
MVRAIYDENSELRQSS LG+EDLK+EDL LL YY SFGFPYLLDL GTIRSSTD+GDLWYREYHLELTKE+QFPIEMS PWI+ EHI K MGH+LVEE+LWALDLYNDAAH ALYVLNSQYLFNEIQAEVNLVFKQLLFDLE EVFGYFKDWAAST+LDK +K+V E ++G GHFIPGRRRYE
Sbjct: 284 MVRAIYDENSELRQSSGVLGREDLKREDLELLRTYYEQSFGFPYLLDLGGTIRSSTDLGDLWYREYHLELTKEIQFPIEMSFPWIITEHIVKTKRAMAIGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGHVLVEEVLWALDLYNDAAHRALYVLNSQYLFNEIQAEVNLVFKQLLFDLEAEVFGYFKDWAASTVLDKAFKKVYEIRRGLGHFIPGRRRYET 535
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: A0A7S1UBW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBW1_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.330e-53 Identity = 98/196 (50.00%), Postives = 137/196 (69.90%), Query Frame = 3
Query: 6 VRAIYDENSELRQ-SSFLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHIGKGGGKGDGMGHILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAASTMLDKMYKRVLETKKGWGHFIPGRRRYEVQYNE 590
VRA+YDE SE RQ + DL KED+ +L +++ +SF F YLL+ +GT+R+ +D+GDLWYRE+ LELT VQFPIEMSLPWIL+EH+ K LVE+I + LD+YNDAAH ALYVLN QYL++EI+AEVNLVF Q++F + +E+ FKD AA+ +++ YK LE + F ++RY++ ++
Sbjct: 1 VRALYDERSEARQYRGLFARRDLGKEDVEVLTRFHQESFSFRYLLNYSGTLRACSDLGDLWYREFFLELTGRVQFPIEMSLPWILVEHVIKSQSSAIP----LVEKIFFTLDVYNDAAHRALYVLNRQYLYDEIEAEVNLVFDQMIFLIADEMLKCFKDQAATNRMNRDYKVHLERVRSGDSFHTLKKRYDIPISQ 192
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: A0A7S2F5C9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5C9_9STRA) HSP 1 Score: 184 bits (467), Expect = 2.380e-50 Identity = 90/196 (45.92%), Postives = 137/196 (69.90%), Query Frame = 3
Query: 3 MVRAIYDENSELRQSSFLG----KEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHIGKGGGKGDGMGHILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAASTMLDKMYKRVLETKKGWGHFIPGRRRYEV 578
+VR++YDE ++ + + DL+KED +L +++ D + FPYLL+ TIRS +D+GDLWYRE++LE+T++VQFPIE SLPWIL EHI K LVE++++ LDLYNDAAH AL+VLN Q+L++EI+AEVNLVF QL+F + +E++ Y+K+ +A +LD K+ + ++ + + +RRYE+
Sbjct: 103 IVRSMYDERTQKSHGGIMSFQKTRHDLEKEDRRILEQFFGDIYDFPYLLNYGSTIRSCSDLGDLWYREFYLEITQQVQFPIEASLPWILTEHIIKNQSNDLP----LVEKLIFILDLYNDAAHRALFVLNQQFLYDEIEAEVNLVFDQLIFLMADEMYTYYKNLSAVALLDNSLKQFEQDRRSSRYLVVSKRRYEI 294
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: A0A835YVZ9_9STRA (Cytoplasmic fragile-X interacting family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ9_9STRA) HSP 1 Score: 184 bits (467), Expect = 2.790e-50 Identity = 103/254 (40.55%), Postives = 142/254 (55.91%), Query Frame = 3
Query: 3 MVRAIYDENSELRQSS-FLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHIGKGGGK---------------------------------------------------------GDGMGH---ILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAAST---MLDKMYKRVLETKKGWGHFIPGRRRY 572
+VRAI DE+SELRQ S LGKEDL K+D+ + +Y +SF FPYL+DL+GTIR+++D+GDLW+REYHLE+T+ +QFP+E S PWIL EH+ GK G G G L E +L ALD+YNDAA AL+ +Q+LF+E+QAEV++ + QL+F LE E++G+ K LDKMY+R +E ++GWG + P RR+
Sbjct: 637 VVRAICDESSELRQGSGILGKEDLTKDDMEAMMTFYAESFAFPYLIDLSGTIRAASDLGDLWFREYHLEITQSIQFPLEQSFPWILTEHMVSSSGKSTSAARAAGPSSPADFNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGAGPEGAALAEAVLCALDVYNDAARAALHTYCAQHLFDEVQAEVSVAYDQLVFQLESEIYGHCKASGFGLELGALDKMYRRRMEERRGWGRYTPAWRRH 890
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: A0A7S3GVR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVR9_9STRA) HSP 1 Score: 168 bits (426), Expect = 6.350e-49 Identity = 91/179 (50.84%), Postives = 121/179 (67.60%), Query Frame = 3
Query: 6 VRAIYDENSELR-QSSFLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHI-GKGGGKGDGMGHILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAASTMLDKMYKRVLETKK 536
+ + D +SELR +SS GK D+ ++ L +Y DSF F Y L+ A T+ S +D+ DLWYRE++LELTK +QFPI+ SLPWIL+EHI K M E +L+ LD+YNDAAH ALYVLN QYL++EI+AE NLV QL F L EEV+ Y+K+ +AS++LD K LE+ K
Sbjct: 45 ISTLCDSHSELRTKSSIFGKTDMDSREVELFTTFYSDSFYFSYALNYAQTLASVSDLSDLWYREHYLELTKCIQFPIDYSLPWILVEHILNKNVSNTPCM-----ENVLFLLDIYNDAAHRALYVLNQQYLYDEIEAESNLVIDQLYFLLSEEVYTYYKNLSASSVLDAKLKHKLESLK 218
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: F0YNJ9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNJ9_AURAN) HSP 1 Score: 166 bits (421), Expect = 1.060e-45 Identity = 83/189 (43.92%), Postives = 131/189 (69.31%), Query Frame = 3
Query: 3 MVRAIYDENSELRQSSFLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHIGKGGGKGDGMGHILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAASTMLDKMYK-RVLETKKGWGHFIPGRR 566
MVR+++D+ ++L+ F K DL++EDL L+ +Y +S F Y+L+ A T+R+++D+ DLWYRE++LEL+ ++QF IE+S PWIL EH+ K LVE IL+ +D+YNDAAH +LYVL+ ++L++EI+AEVNLVF QL+F + + V+ Y+KD S +D Y+ R+ ++ + +P RR
Sbjct: 106 MVRSMFDQRNQLKVGMF-SKRDLEREDLQLMETFYNESLCFQYILNHAVTLRANSDLADLWYREFYLELSGQIQFAIELSFPWILTEHVITNQAKSMP----LVENILYTMDVYNDAAHRSLYVLSQRFLYDEIEAEVNLVFDQLIFLISDHVYSYYKDNIGSRTIDGPYRERLFLMRRAYSLDVPARR 289
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: F0YL26_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL26_AURAN) HSP 1 Score: 162 bits (411), Expect = 8.930e-43 Identity = 79/171 (46.20%), Postives = 122/171 (71.35%), Query Frame = 3
Query: 3 MVRAIYDENSELRQSSFLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHIGKGGGKGDGMGHILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAASTMLDKMYK 515
MVR+++D+ ++L+ F K DL++EDL L+ +Y +S F Y+L+ A T+R+++D+ DLWYRE++LEL+ ++QF IE+S PWIL EH+ K LVE IL+ +D+YNDAAH +LYVL+ ++L++EI+AEVNLVF QL+F + + V+ Y+KD S +D Y+
Sbjct: 574 MVRSMFDQRNQLKVGMF-SKRDLEREDLQLMETFYNESLCFQYILNHAVTLRANSDLADLWYREFYLELSGQIQFAIELSFPWILTEHVITNQAKSMP----LVENILYTMDVYNDAAHRSLYVLSQRFLYDEIEAEVNLVFDQLIFLISDHVYSYYKDNIGSRTIDGPYR 739
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: A0A8J2T1L4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1L4_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.440e-41 Identity = 85/196 (43.37%), Postives = 126/196 (64.29%), Query Frame = 3
Query: 3 MVRAIYDENSELRQSSFLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHIGKGGGKGDGMGHILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAASTMLDKMYKRVLETKKGWGHFIPGRRRYEVQYNE 590
MVRA+YD ++LR F K+DL+KEDL L++ +Y +S F YLL+ GT+ S++D+GDLWYRE++LEL+ EVQF IE+SL WIL EH+ K LVE IL+ LD YNDAAH ++ VL+ ++L++EI+AEVNL+F Q++F + + V+ Y+ +D + L +P +RY V ++
Sbjct: 576 MVRAMYDPRNQLRVQ-FFSKKDLEKEDLQLMDYFYCESLCFQYLLNYTGTLTSNSDLGDLWYREFYLELSGEVQFAIELSLAWILAEHVITDQHKSMP----LVENILYTLDTYNDAAHRSISVLSQRFLYDEIEAEVNLIFDQIVFLVSDHVYSYYTKMVGLRHVDAPHHERLHPTLKCAD-VPAAQRYHVPISQ 765
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Match: A0A058Z0X7_FONAL (DUF1394 domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z0X7_FONAL) HSP 1 Score: 152 bits (383), Expect = 5.180e-39 Identity = 72/175 (41.14%), Postives = 115/175 (65.71%), Query Frame = 3
Query: 3 MVRAIYDENSELRQSSFLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTIRSSTDMGDLWYREYHLELTKEVQFPIEMSLPWILIEHIGKGGGKGDGMGHILVEEILWALDLYNDAAHTALYVLNSQYLFNEIQAEVNLVFKQLLFDLEEEVFGYFKDWAASTMLDKMYKRVLE 527
++ ++Y+E + + F+ +DL E GLL+ + ++ FP +L ++ +++D+ +LWY+E++L L KE+QFPIEMSLPWIL EH+ H L+E +L+ L+LYNDAA A++ L S++LF+EIQAEVNL F Q +F L VF ++K A+S +++K YK + E
Sbjct: 604 LLDSVYNEKAPGMRGGFMKDKDLSSEQAGLLDAVFQEAHFFPVMLSFGASVEAASDLSELWYKEFYLGLRKEIQFPIEMSLPWILTEHV-----LNPDDAHALIESVLYPLELYNDAAGRAIHKLRSRFLFDEIQAEVNLAFDQFIFALSNAVFEHYKQRASSVLINKEYKLLFE 773 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14098.2840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14098.2840.1 >prot_H-elongata_contig14098.2840.1 ID=prot_H-elongata_contig14098.2840.1|Name=mRNA_H-elongata_contig14098.2840.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp MVRAIYDENSELRQSSFLGKEDLKKEDLGLLNKYYVDSFGFPYLLDLAGTback to top mRNA from alignment at H-elongata_contig14098:5336..7941+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14098.2840.1 ID=mRNA_H-elongata_contig14098.2840.1|Name=mRNA_H-elongata_contig14098.2840.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2606bp|location=Sequence derived from alignment at H-elongata_contig14098:5336..7941+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14098:5336..7941+ >mRNA_H-elongata_contig14098.2840.1 ID=mRNA_H-elongata_contig14098.2840.1|Name=mRNA_H-elongata_contig14098.2840.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig14098:5336..7941+ (Himanthalia elongata Himel1 dioecious)back to top |