prot_H-elongata_contig140767.2826.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig140767.2826.1
Unique Name	prot_H-elongata_contig140767.2826.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	97

Homology

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: D7FNE6_ECTSI (NADH-cytochrome b5 reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNE6_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.020e-33
Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = 0

Query:    1 MRGPKGSLTYLGKGSFRVKRREDRKQVRKLGMMAGGTGITPMLQIISAVMREGD-GL-EMSLIFANKSEDDILLRDMIEKLVCIYGRF 86
            MRGPKG+LTYLG G+F ++RR+DR QVRKLGMMAGGTGITPMLQ+ISA+MREG  GL EMSLIFANKSEDDILLRDMIEKL      F
Sbjct:  139 MRGPKGNLTYLGTGNFSIRRRDDR-QVRKLGMMAGGTGITPMLQVISAIMREGSTGLVEMSLIFANKSEDDILLRDMIEKLAASNPNF 225

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: A0A835ZPK9_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPK9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.870e-26
Identity = 53/86 (61.63%), Postives = 68/86 (79.07%), Query Frame = 0

Query:    1 MRGPKGSLTYLGKGSFRVKRREDRKQVRKLGMMAGGTGITPMLQIISAVMREGDGLEMSLIFANKSEDDILLRDMIEKLVCIYGRF 86
            M GPKGSL Y GKG F +++REDR QV+++GM+AGGTGITPMLQI++A+ +E   +E+SLIFAN+SE DILLRDMIE     +  F
Sbjct:  158 MMGPKGSLEYKGKGLFSIRKREDR-QVKRIGMLAGGTGITPMLQIMNAIRKENSNIELSLIFANQSEQDILLRDMIEAFPMKHANF 242

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: A0A6V1RBP2_HETAK (NADH-cytochrome b5 reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RBP2_HETAK)

HSP 1 Score: 104 bits (259), Expect = 6.830e-25
Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = 0

Query:    1 MRGPKGSLTYLGKGSFRVKRRED--RKQVRKLGMMAGGTGITPMLQIISAVMREGDGLEMSLIFANKSEDDILLRDMIEKLVCIYGRF 86
            MRGPKG L Y G G+F +K+  D   K V K+GMMAGGTGITPMLQ+I A+++EG G+EMSL+FAN+SEDDILLR  +++L   +  F
Sbjct:  167 MRGPKGHLDYKGSGNFTLKKLTDVTEKTVTKVGMMAGGTGITPMLQVIKAILKEGSGIEMSLLFANQSEDDILLRADLDELARKHANF 254

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: A0A2R5GNS8_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNS8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.290e-22
Identity = 51/88 (57.95%), Postives = 70/88 (79.55%), Query Frame = 0

Query:    1 MRGPKGSLTYLGKGSFRVKRREDRKQVRKLGMMAGGTGITPMLQIISAVMRE-GDGLEMSLIFANKSEDDILLRDMIEKLVCIY-GRF 86
            ++GP G   YLGKG+F++ R+   ++V+K+GM+AGGTGITPMLQ+I+A+M +  D  E+SLIFANK+EDDIL+RDM+EKL     GRF
Sbjct:  161 VQGPFGLYEYLGKGTFKIMRKT--REVKKVGMLAGGTGITPMLQVITAIMSDDSDATEVSLIFANKTEDDILVRDMLEKLAAENPGRF 246

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: A0A7S1BKY8_9STRA (NADH-cytochrome b5 reductase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKY8_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.190e-19
Identity = 48/88 (54.55%), Postives = 63/88 (71.59%), Query Frame = 0

Query:    1 MRGPKGSLTYLGKGSFR----VKRREDRKQVRKLGMMAGGTGITPMLQIISAVMREG-DGLEMSLIFANKSEDDILLRDMIEKLVCIY 83
            M+GPKG +TYLG G FR    ++  ++ +Q +   M+AGGTGITPMLQ+I AV+R   D   +SL+FANKSE+DILLRD +E LV  Y
Sbjct:  136 MKGPKGHMTYLGYGKFRKHAYLRAPDETRQAKHFAMIAGGTGITPMLQLIKAVLRNPKDETTLSLLFANKSENDILLRDELETLVAKY 223

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: C1FJ74_MICCC (NADH-cytochrome b5 reductase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FJ74_MICCC)

HSP 1 Score: 89.0 bits (219), Expect = 4.470e-19
Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 0

Query:    3 GPKGSLTYLGKGSFRVKRREDR------KQVRKLGMMAGGTGITPMLQIISAVMRE-GDGLEMSLIFANKSEDDILLRDMIEK 78
            GPKG   Y GKG+F +KR + +      ++ +K+GM+AGGTGITPMLQ++ AV R+ GD  +MSLIFAN++E+DILLRD ++K
Sbjct:  165 GPKGRYEYRGKGTFAIKRLKSQGGGFEIRKAKKIGMIAGGTGITPMLQVMRAVFRDKGDKTDMSLIFANQTEEDILLRDELDK 247

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: A0A369SJJ9_9METZ (Cytochrome-b5 reductase (Fragment) n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SJJ9_9METZ)

HSP 1 Score: 88.6 bits (218), Expect = 9.470e-19
Identity = 45/84 (53.57%), Postives = 64/84 (76.19%), Query Frame = 0

Query:    1 MRGPKGSLTYLGKGSFRVKRREDR----KQVRKLGMMAGGTGITPMLQIISAVMREG-DGLEMSLIFANKSEDDILLRDMIEKL 79
            +RGP G +TYLG+G   +K    +    K V+KLG++AGGTGITPMLQII AV+++  D  E+SL+FAN++E+DILLRD +E++
Sbjct:  200 VRGPSGKVTYLGRGKLSIKESPKKDAVIKNVKKLGLIAGGTGITPMLQIIRAVLKDPEDKTELSLLFANQTENDILLRDHLEEI 283

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: A0A7J7J471_BUGNE (Cytochrome-b5 reductase n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7J471_BUGNE)

HSP 1 Score: 85.1 bits (209), Expect = 1.010e-18
Identity = 49/86 (56.98%), Postives = 62/86 (72.09%), Query Frame = 0

Query:    1 MRGPKGSLTYLGKGSFRVKRREDRK------QVRKLGMMAGGTGITPMLQIISAVM-REGDGLEMSLIFANKSEDDILLRDMIEKL 79
            MRGP G  TY GKG F +K   D+K      QV+K+GM+AGGTGITPMLQ+I  V+ R  D  ++SLIFAN++E+DILLRD +E L
Sbjct:   16 MRGPSGLCTYEGKGLFAIK--PDKKSQPAMRQVKKVGMIAGGTGITPMLQLIKDVLKRPEDKTKLSLIFANQTEEDILLRDELEGL 99

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: B3RLU5_TRIAD (NADH-cytochrome b5 reductase n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RLU5_TRIAD)

HSP 1 Score: 88.6 bits (218), Expect = 1.070e-18
Identity = 45/84 (53.57%), Postives = 64/84 (76.19%), Query Frame = 0

Query:    1 MRGPKGSLTYLGKGSFRVKRREDR----KQVRKLGMMAGGTGITPMLQIISAVMREG-DGLEMSLIFANKSEDDILLRDMIEKL 79
            +RGP G +TYLG+G   +K    +    K V+KLG++AGGTGITPMLQII AV+++  D  E+SL+FAN++E+DILLRD +E++
Sbjct:  215 VRGPSGKVTYLGRGKLSIKESPKKDAVIKNVKKLGLIAGGTGITPMLQIIRAVLKDPEDKTELSLLFANQTENDILLRDHLEEI 298

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BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Match: A0A7S2F5K3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2F5K3_9DINO)

HSP 1 Score: 84.0 bits (206), Expect = 1.780e-18
Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0

Query:    3 GPKGSLTYLGKGSFRVKRREDRKQVRKLGMMAGGTGITPMLQIISAVMREGDG-LEMSLIFANKSEDDILLRDMIEKL 79
            GP G   YLGKGSF++  R     VRK+GMMAGGTG+TPMLQ+  A +R+ D  +  SL++ANK+EDDIL RDM+++L
Sbjct:    4 GPLGVNEYLGKGSFKLPGRT--VTVRKVGMMAGGTGLTPMLQVAQAAIRDADDKVTFSLMYANKTEDDILCRDMLDEL 79

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot

BLAST of mRNA_H-elongata_contig140767.2826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNE6_ECTSI	1.020e-33	78.41	NADH-cytochrome b5 reductase n=2 Tax=Ectocarpus Ta...	[more]
A0A835ZPK9_9STRA	1.870e-26	61.63	NADH-cytochrome b5 reductase n=1 Tax=Tribonema min...	[more]
A0A6V1RBP2_HETAK	6.830e-25	59.09	NADH-cytochrome b5 reductase n=1 Tax=Heterosigma a...	[more]
A0A2R5GNS8_9STRA	1.290e-22	57.95	NADH-cytochrome b5 reductase n=1 Tax=Hondaea ferme...	[more]
A0A7S1BKY8_9STRA	1.190e-19	54.55	NADH-cytochrome b5 reductase n=2 Tax=Corethron hys...	[more]
C1FJ74_MICCC	4.470e-19	54.22	NADH-cytochrome b5 reductase n=1 Tax=Micromonas co...	[more]
A0A369SJJ9_9METZ	9.470e-19	53.57	Cytochrome-b5 reductase (Fragment) n=1 Tax=Trichop...	[more]
A0A7J7J471_BUGNE	1.010e-18	56.98	Cytochrome-b5 reductase n=1 Tax=Bugula neritina Ta...	[more]
B3RLU5_TRIAD	1.070e-18	53.57	NADH-cytochrome b5 reductase n=1 Tax=Trichoplax ad...	[more]
A0A7S2F5K3_9DINO	1.780e-18	56.41	Hypothetical protein (Fragment) n=1 Tax=Alexandriu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001709	Flavoprotein pyridine nucleotide cytochrome reductase	PRINTS	PR00371	FPNCR	coord: 56..65 score: 27.36 coord: 68..79 score: 29.21 coord: 31..50 score: 36.44
IPR001834	NADH:cytochrome b5 reductase-like	PRINTS	PR00406	CYTB5RDTASE	coord: 31..50 score: 57.29 coord: 68..79 score: 46.18
IPR039261	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	GENE3D	3.40.50.80		coord: 6..94 e-value: 1.0E-19 score: 72.7
IPR039261	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	SUPERFAMILY	52343	Ferredoxin reductase-like, C-terminal NADP-linked domain	coord: 24..92
IPR001433	Oxidoreductase FAD/NAD(P)-binding	PFAM	PF00175	NAD_binding_1	coord: 32..80 e-value: 4.0E-12 score: 46.7
None	No IPR available	PANTHER	PTHR19370:SF185	NADH-CYTOCHROME B5 REDUCTASE	coord: 1..79
None	No IPR available	PANTHER	PTHR19370	NADH-CYTOCHROME B5 REDUCTASE	coord: 1..79
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 75..95
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..50
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 51..74
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 96..96
None	No IPR available	TMHMM	TMhelix		coord: 27..49
None	No IPR available	TMHMM	TMhelix		coord: 75..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig140767	contig	H-elongata_contig140767:44..1129 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig140767.2826.1	mRNA_H-elongata_contig140767.2826.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig140767 44..1147 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig140767.2826.1 ID=prot_H-elongata_contig140767.2826.1|Name=mRNA_H-elongata_contig140767.2826.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
MRGPKGSLTYLGKGSFRVKRREDRKQVRKLGMMAGGTGITPMLQIISAVM
REGDGLEMSLIFANKSEDDILLRDMIEKLVCIYGRFFFFFFFFFYV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001709	Flavoprot_Pyr_Nucl_cyt_Rdtase
IPR001834	CBR-like
IPR039261	FNR_nucleotide-bd
IPR001433	OxRdtase_FAD/NAD-bd