prot_H-elongata_contig103369.280.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103369.280.1
Unique Nameprot_H-elongata_contig103369.280.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length248
Homology
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: D8LJH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH3_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.980e-46
Identity = 101/201 (50.25%), Postives = 129/201 (64.18%), Query Frame = 0
Query:    1 MATRMSVPDFAELLRDQNVTEFVRITPLTAHIEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAMHSKEVS-FNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEG-------SGKLPPVDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELASMAVYRITTIEGTQRLMDNIKKYAIQVIETEERSKKNAPLNRIF 193
            M +R SVP FAELLRDQNV   VRITP++   E GHLVALG +GF LC CLR L+ GL C H +KA+  +  S FNGA I+PRWRD    WTMAALAAKPA+LS TG  G         ++PPVDT   SP+V SHS   +  + + N   LGKEL  M    + ++   QRLM+++K +A Q IE E+RS ++   +R+F
Sbjct:  257 MVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLS-TGAAGLXXXXXXXXQMPPVDT---SPIVSSHSGLNLSAYAYANGVALGKELGGM-FKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVF 452          
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: A0A6H5K1S8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S8_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 8.080e-45
Identity = 98/211 (46.45%), Postives = 133/211 (63.03%), Query Frame = 0
Query:    1 MATRMSVPDFAELLRDQNVTEFVRIT-PLTAHIEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAMHSKEVSFNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEGSGKLPPVDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELASMAVYRITTIEGTQRLMDNIKKYAIQVIETEERSKKNAPLNRIFA-----SRPAADSPGGG 205
            +ATR S+  FAELL+DQ +   VR++       +Y  LVALG +GF LC CLR+L+DGL CRH L+AM   ++ F GACIAPRWRDG   WTM  LAAKPA ++AT T+  G++PP   D ++   FSHS+ TVR   + + C  GKELA++    I  + G  R++DN+  +A Q+++ E RS+ NA   R+F      S PA D P GG
Sbjct:  283 LATRTSIEFFAELLKDQVLDRLVRVSRSFGDQTKYCQLVALGPDGFFLCTCLRILVDGLGCRHALRAMRGTDLGFTGACIAPRWRDGIMPWTMGRLAAKPA-VAAT-TDAGGEMPPPPADASAFSRFSHSKSTVRASAWASCCAWGKELATITA-PIDNVAGITRILDNLTIHARQLVDVELRSQHNASTTRVFKGVVTRSTPAPDPPEGG 490          
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: A0A6H5KFX3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX3_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 6.620e-43
Identity = 102/210 (48.57%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    3 TRMSVPDFAELLRDQNVTEFVRITPLTAH--IEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAMHSKEVSFNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEGSGKLPPVDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELASMAVYRITTIEGTQRLMDNIKKYAIQVIETEERSKKNAPLNRIFA---SRP--AADSPGGG 205
            TR SV  FAELL DQ + + VRIT   +     YGHLVALG +GF LC CLRLL+ GL CRHGL+A+   +  FNG CIA RWRD    WTM  LAAK A  + T     G +PP  TD   P VFSHS+PT R   + +    GKELAS+    +  +   QR+++N+  YA Q+IE E RS+  A  NRIF    +RP  A D P GG
Sbjct:  360 TRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHLVALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGFNGGCIASRWRDSTQPWTMEHLAAKRAAPANTAAGVPGDMPPAPTD---PGVFSHSKPTARVSNWASCVAFGKELASLMT-DVDAVAPCQRVLNNLTNYAKQLIEVEARSQHEATTNRIFTGVVARPVTATDPPEGG 565          
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: D7FVI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI8_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.420e-42
Identity = 93/178 (52.25%), Postives = 115/178 (64.61%), Query Frame = 0
Query:    1 MATRMSVPDFAELLRDQNVTEFVRITPLTAHIEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAMHSKEVS-FNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEG-------SGKLPPVDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELASMAVYRITTIEGTQRLMDNIK 170
            M +R SVP FAELLRDQNV   VRITP++   E GHLVALG +GF LC CLR L+ GL C H +KA+  +  S FNGA I+PRWRD    WTMAALAAKPA+LS TG  G         ++PPVDT   SP+V SHS P +  + + N   LGKEL  M    + ++   QRLM+++K
Sbjct:  257 MVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLS-TGAAGLXXXXXXXXQMPPVDT---SPIVSSHSGPNLSAYAYANGVALGKELGGM-FKEVPSVASIQRLMESMK 429          
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: A0A6H5KKK0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK0_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 3.210e-42
Identity = 99/210 (47.14%), Postives = 123/210 (58.57%), Query Frame = 0
Query:    3 TRMSVPDFAELLRDQNVTEFVRITPLTAH--IEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAMHSKEVSFNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEGSGKLPPVDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELASMAVYRITTIEGTQRLMDNIKKYAIQVIETEERSKKNAPLNRIFA---SRP--AADSPGGG 205
            TR SV  FAELL DQ + + VRIT   +     YGHLVALG +GF LC CLRL + GL CRHGL+A+   +  FNG CIA RWRD    WTM  LAAK A  + T     G +PP   D   PV FS+S+PT R   + +    GKELAS+    +  +   QR+++N+  YA Q+IE E RS+  A  NRIF    +RP  A D P GG
Sbjct:  154 TRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHLVALGPDGFVLCTCLRLRVYGLGCRHGLRAVRDTDFGFNGGCIASRWRDSTQPWTMEHLAAKRAAPANTAAGVPGGMPPAPVD---PVFFSNSKPTARVSNWASCVAFGKELASLMT-DVDAVAPCQRVLNNLTNYAKQLIEVEARSQHEATTNRIFTGVVARPVTATDPPEGG 359          
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: A0A6H5JYV9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV9_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.630e-40
Identity = 100/210 (47.62%), Postives = 122/210 (58.10%), Query Frame = 0
Query:    3 TRMSVPDFAELLRDQNVTEFVRITPLTAH--IEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAMHSKEVSFNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEGSGKLPPVDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELASMAVYRITTIEGTQRLMDNIKKYAIQVIETEERSKKNAPLNRIFA---SRP--AADSPGGG 205
            TR SV  FAELL DQ + + VRIT   +     YGHLVALG +GF LC CLRLL+ GL CRHGL+A+   +   NG CIA RWRD    WTM  L AK A  + T     G +PP   D   P VFSHS+PT R   + +    GKELAS+    +  I   QR+++N+  YA Q+IE E RS+  A  NRIF    +RP  A D P GG
Sbjct:  411 TRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHLVALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGLNGGCIASRWRDSTQPWTMEHLTAKRAAPANTAAGVPGDMPPAPMD---PGVFSHSKPTARASNWASCVAFGKELASLMT-DVDAIAPCQRVLNNLTNYAKQLIEVEARSQHEATTNRIFTGVVARPVTATDPPEGG 616          
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: D8LSE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE5_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 1.800e-40
Identity = 88/159 (55.35%), Postives = 104/159 (65.41%), Query Frame = 0
Query:    1 MATRMSVPDFAELLRDQNVTEFVRITPLTAHIEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAMHSKEVS-FNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEG-------SGKLPPVDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELASM 151
            M +R SVP FAELLRDQNV   VRITP++   E GHLVALG +GF LC CLR L+ GL C H +KA+  +  S FNGA I+PRWRD    WTMAALAAKPA+LS TG  G         ++PPVDT   SP+V SHS P +  + + N   LGKEL  M
Sbjct:  124 MVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLS-TGAAGLXXXXXXXXQMPPVDT---SPIVSSHSGPNLSAYAYANGVALGKELGGM 278          
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: A0A6H5JGY2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY2_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 7.990e-39
Identity = 104/225 (46.22%), Postives = 132/225 (58.67%), Query Frame = 0
Query:    1 MATRMSVPDFAELLRDQNVTEFVRITPLTAHIEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAMHSKEV-SFNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEGSGKLP-----PVDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELASMAVYRITTIEGTQRLMDNIKKYAIQVIETEERSKKNAPLNRIFA---SRPAADSPGG---GAGRGEPGR 213
            M +R SVP  A+LLRDQNV   VR++ +T   EY HLVALG +GF LC CLR L+ GL C HGL+A+ ++ V SFNGA I+PRWR+    W MA LAAKPA LSA     +G LP     P   D  S V  S S P V  + + N   LGK+L  M    I  + G  R M+ IK +A   ++ ++RS++    NR+F    S+PA D P G   G GRG PGR
Sbjct:  823 MVSRTSVPHVADLLRDQNVNAVVRVSMITPLSEYSHLVALGPDGFFLCTCLRQLVYGLLCPHGLEALWAEGVVSFNGAIISPRWRESETPWLMAELAAKPASLSARAATSAG-LPAGVGQPPRVDPNSTV--SRSGPNVPSYTYANGVALGKKLGGM-FKEINNLAGIHRAMETIKLFARGQVDLDKRSQEKHSTNRVFRGVFSQPAEDVPSGDAGGTGRG-PGR 1042          
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.240e-37
Identity = 86/195 (44.10%), Postives = 121/195 (62.05%), Query Frame = 0
Query:    1 MATRMSVPDFAELLRDQNVTEFVRITPLTAHIEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAMHSKEVS-FNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEGSGKLPP-VDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELASMAVYRITTIEGTQRLMDNIKKYAIQVIETEERSKKNAPLNRIF 193
            M +R SVP FA+LLR QNV   VRI+ +T   E+GHLVA+GS+GF LC CLR L+ GL C H +KA+ S+ ++ FNGA I P WRD +  WTM ALAA+PARLS       G++PP V   DA  +    S P +  + + N  +LGKEL ++    + ++ G  R++D +  +A Q +E E+RS +     R+F
Sbjct:  672 MVSRTSVPHFADLLRGQNVDAVVRISKITPPSEFGHLVAVGSDGFFLCTCLRQLVYGLLCPHVIKALWSQRITRFNGASIGPWWRDSSTPWTMEALAARPARLSTGAAGAHGQVPPLVGNPDA--IGSLDSGPKLSAYGYANGLSLGKELGAL-FKEVGSVAGIHRVVDTVFNFARQQVEVEKRSLRQESRGRVF 863          
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Match: A0A6H5KQ14_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ14_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.550e-37
Identity = 90/192 (46.88%), Postives = 120/192 (62.50%), Query Frame = 0
Query:    1 MATRMSVPDFAELLRDQNVTEFVRITPLTAHIEYGHLVALGSEGFCLCKCLRLLLDGLCCRHGLKAM-----HSKEVSFNGACIAPRWRDGAAAWTMAALAAKPARLSATGTEGSGKLPPVDTDDASPVVFSHSEPTVRFHV----FGNFCTLGKELASMAVYRITTIEGTQRLMDNIKKYAIQVIETEERS 183
            MATR SV  FA+LL DQNV E VRIT   A  E+GHLVALG +GF LC CLR+L+ GL C H +KA+     + K  SFN ACI+PRWRD   +WTMA LAAKPARL+    E +G LP +D +    VV S+S  TV   V    + +  + GK++    +  IT+  G QR++++   + +Q +E E+RS
Sbjct:  358 MATRTSVAHFADLLHDQNVEELVRITIFNAQSEFGHLVALGPDGFFLCTCLRMLVYGLPCPHCIKALAHMRGNDKVFSFNAACISPRWRDSETSWTMAHLAAKPARLATADAELAG-LPVIDPNS---VVVSYSSATVAATVAAAGYADAVSYGKKMGGK-LRGITSSAGIQRVLESTYDFFLQQLEVEKRS 544          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103369.280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D8LJH3_ECTSI2.980e-4650.25Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K1S8_9PHAE8.080e-4546.45SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KFX3_9PHAE6.620e-4348.57SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FVI8_ECTSI1.420e-4252.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKK0_9PHAE3.210e-4247.14SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JYV9_9PHAE1.630e-4047.62SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LSE5_ECTSI1.800e-4055.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGY2_9PHAE7.990e-3946.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXK5_9PHAE1.240e-3744.10SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KQ14_9PHAE2.550e-3746.88SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103369contigH-elongata_contig103369:1284..2059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103369.280.1mRNA_H-elongata_contig103369.280.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103369 1284..2071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103369.280.1 ID=prot_H-elongata_contig103369.280.1|Name=mRNA_H-elongata_contig103369.280.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp
MATRMSVPDFAELLRDQNVTEFVRITPLTAHIEYGHLVALGSEGFCLCKC
LRLLLDGLCCRHGLKAMHSKEVSFNGACIAPRWRDGAAAWTMAALAAKPA
RLSATGTEGSGKLPPVDTDDASPVVFSHSEPTVRFHVFGNFCTLGKELAS
MAVYRITTIEGTQRLMDNIKKYAIQVIETEERSKKNAPLNRIFASRPAAD
SPGGGAGRGEPGRATGGAGHRVANSKARSGAGGGRGSTDRGSGRGGGG
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