prot_H-elongata_contig139895.2778.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig139895.2778.1
Unique Name	prot_H-elongata_contig139895.2778.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	94

Homology

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: D8LF38_ECTSI (Divalent metal transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF38_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 2.410e-46
Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLT 93
            +TGAYTGYQLLWVLLLAHI+GL+LQSLAAR+GVVTGTHLADVCRT+Y RP ALLLWVM E AIIGSDIQEV+GSAIGLQILFGIPLWVGCLLT
Sbjct:  118 QTGAYTGYQLLWVLLLAHILGLVLQSLAARIGVVTGTHLADVCRTHYDRPAALLLWVMMEVAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLT 210

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: A0A835YZC9_9STRA (Divalent metal transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC9_9STRA)

HSP 1 Score: 139 bits (351), Expect = 9.860e-37
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLT 93
            +TGAYTGYQL+WVLLLAH+ GLLLQS+A+RLGVVTG HLA + R  Y RP +LLLW+M E AIIGSDIQEV+GSAI LQIL G+PLW GC++T
Sbjct:   66 QTGAYTGYQLIWVLLLAHMFGLLLQSMASRLGVVTGNHLAGIARLNYKRPASLLLWLMAELAIIGSDIQEVLGSAIALQILTGVPLWAGCVIT 158

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: A0A1V9YM96_9STRA (Metal Ion (Mn2-iron) Transporter (Nramp) Family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YM96_9STRA)

HSP 1 Score: 133 bits (335), Expect = 9.560e-35
Identity = 64/94 (68.09%), Postives = 78/94 (82.98%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLTG 94
            + GAY GY+L+WVL  A ++G  LQ+LAARLGVVTG HLA+VC T YPR  + +LWVMTE AI+GSDIQEV+GSAI LQILF +PLW+GCL+TG
Sbjct:   81 QAGAYGGYELIWVLFGATVLGFFLQTLAARLGVVTGKHLAEVCHTMYPRWASFILWVMTEIAIVGSDIQEVLGSAIALQILFSLPLWLGCLITG 174

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: A0A7S2X831_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X831_9EUKA)

HSP 1 Score: 125 bits (313), Expect = 9.720e-35
Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCL 91
            + GAYTGYQLLWVL ++  +GL  Q LAARLGVVTG +LA +CR  YPR  +L LWVMTE AIIGSDIQE++GSA+  QILFG PLW+GCL
Sbjct:   63 QAGAYTGYQLLWVLFMSTAVGLYFQILAARLGVVTGRNLAQMCRLAYPRWASLGLWVMTELAIIGSDIQEIIGSAVAFQILFGFPLWLGCL 153

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: A0A1V9ZYU6_9STRA (Metal Ion (Mn2-iron) Transporter (Nramp) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYU6_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.100e-34
Identity = 65/94 (69.15%), Postives = 79/94 (84.04%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLTG 94
            + GAY+ YQL+WVLL A +MG  LQ+L+ARLGVVTG HLA+VCR  YPR  + +LW+MTE AI+GSDIQEV+GSAI LQILFG+PLW GCL+TG
Sbjct:  569 QAGAYSRYQLIWVLLGATVMGFFLQTLSARLGVVTGKHLAEVCREMYPRWASYILWIMTEIAIVGSDIQEVLGSAIALQILFGLPLWAGCLVTG 662

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: A0A7J6RAF5_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RAF5_PEROL)

HSP 1 Score: 125 bits (313), Expect = 3.460e-34
Identity = 60/93 (64.52%), Postives = 76/93 (81.72%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLT 93
            ++GA+TGYQ+LWVLLLAHI+GL+LQ L+ RL  VTG HLA+ CR  YPR  A +LW+MTE AIIGSDIQEV+G+AI  ++LF IPLW G ++T
Sbjct:   89 QSGAFTGYQMLWVLLLAHIVGLILQVLSCRLAAVTGEHLAEHCRARYPRWTARVLWIMTEIAIIGSDIQEVLGTAIAFRVLFNIPLWAGTIIT 181

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: A0A5D6XI84_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI84_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.200e-33
Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLTG 94
            + GAY GYQL+WVL  A +MG  LQ LAARLGVVTG +LA++C   YPR  +L+LW+MTE AI+GSDIQEV+GSAI  Q+LFG PLWVGCL+TG
Sbjct:  104 QAGAYGGYQLIWVLFAATVMGFFLQVLAARLGVVTGKNLAEMCTARYPRWASLVLWIMTEIAIVGSDIQEVLGSAIAFQLLFGFPLWVGCLVTG 197

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: A0A7J6UGL9_PEROL (Uncharacterized protein (Fragment) n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6UGL9_PEROL)

HSP 1 Score: 125 bits (313), Expect = 2.800e-33
Identity = 60/93 (64.52%), Postives = 76/93 (81.72%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLT 93
            ++GA+TGYQ+LWVLLLAHI+GL+LQ L+ RL  VTG HLA+ CR  YPR  A +LW+MTE AIIGSDIQEV+G+AI  ++LF IPLW G ++T
Sbjct:   89 QSGAFTGYQMLWVLLLAHIVGLILQVLSCRLAAVTGEHLAEHCRARYPRWTARVLWIMTEVAIIGSDIQEVLGTAIAFRVLFNIPLWAGTIIT 181

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: A0A418EA93_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EA93_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.750e-33
Identity = 61/93 (65.59%), Postives = 74/93 (79.57%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLT 93
            + GAY GYQL+WVLL A IMG  LQ L+ARLGVVTG +LA++C   YPR  + +LW M E AI+GSDIQEV+GSAI LQILF +PLW+GCL+T
Sbjct:   99 QAGAYGGYQLIWVLLGATIMGFFLQVLSARLGVVTGKNLAEMCHLMYPRWTSRVLWFMAEVAIVGSDIQEVLGSAIALQILFKLPLWIGCLIT 191

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BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Match: A0A8K1CE46_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE46_PYTOL)

HSP 1 Score: 128 bits (322), Expect = 7.340e-33
Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 0

Query:    1 KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRPIALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLTG 94
            + GAY GYQL+WVL  + +MG  LQ LAARLGVVTG +LA+VC + YPR  +L+LWVMTE AIIGSDIQEV+GSAI  QILF  PLW+GCL+TG
Sbjct:   97 QAGAYGGYQLIWVLFASTVMGFYLQILAARLGVVTGKNLAEVCTSEYPRWASLVLWVMTEIAIIGSDIQEVLGSAIAFQILFNFPLWLGCLITG 190

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot

BLAST of mRNA_H-elongata_contig139895.2778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LF38_ECTSI	2.410e-46	89.25	Divalent metal transporter n=2 Tax=Ectocarpus TaxI...	[more]
A0A835YZC9_9STRA	9.860e-37	73.12	Divalent metal transporter n=1 Tax=Tribonema minus...	[more]
A0A1V9YM96_9STRA	9.560e-35	68.09	Metal Ion (Mn2-iron) Transporter (Nramp) Family n=...	[more]
A0A7S2X831_9EUKA	9.720e-35	68.13	Hypothetical protein (Fragment) n=1 Tax=Lotharella...	[more]
A0A1V9ZYU6_9STRA	1.100e-34	69.15	Metal Ion (Mn2-iron) Transporter (Nramp) Family n=...	[more]
A0A7J6RAF5_PEROL	3.460e-34	64.52	Uncharacterized protein (Fragment) n=1 Tax=Perkins...	[more]
A0A5D6XI84_9STRA	2.200e-33	67.02	Uncharacterized protein (Fragment) n=1 Tax=Pythium...	[more]
A0A7J6UGL9_PEROL	2.800e-33	64.52	Uncharacterized protein (Fragment) n=2 Tax=Perkins...	[more]
A0A418EA93_9STRA	5.750e-33	65.59	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A8K1CE46_PYTOL	7.340e-33	68.09	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001046	NRAMP family	PRINTS	PR00447	NATRESASSCMP	coord: 55..81 score: 59.41 coord: 83..94 score: 30.8
IPR001046	NRAMP family	PFAM	PF01566	Nramp	coord: 2..94 e-value: 2.5E-35 score: 122.1
IPR001046	NRAMP family	PANTHER	PTHR11706	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	coord: 2..94
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 71..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 93..94
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 35..45
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..34
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 66..70
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..65
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 71..93
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig139895	contig	H-elongata_contig139895:298..579 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig139895.2778.1	mRNA_H-elongata_contig139895.2778.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig139895 298..579 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig139895.2778.1 ID=prot_H-elongata_contig139895.2778.1|Name=mRNA_H-elongata_contig139895.2778.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
KTGAYTGYQLLWVLLLAHIMGLLLQSLAARLGVVTGTHLADVCRTYYPRP
IALLLWVMTESAIIGSDIQEVVGSAIGLQILFGIPLWVGCLLTG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001046	NRAMP_fam