prot_H-elongata_contig139833.2771.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig139833.2771.1
Unique Nameprot_H-elongata_contig139833.2771.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
BLAST of mRNA_H-elongata_contig139833.2771.1 vs. uniprot
Match: D7FYP3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP3_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.220e-17
Identity = 33/43 (76.74%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 GLRPGVVLGGDLNSPPNGPVRYLLGELVGPDSDLWRNVETFQW 43
            GLRP V+LGGDLNSPP+GPVRYL+G+L+GPDSDLW N+ TF+W
Sbjct:  490 GLRPAVILGGDLNSPPDGPVRYLMGDLIGPDSDLWENMGTFKW 532          
BLAST of mRNA_H-elongata_contig139833.2771.1 vs. uniprot
Match: A0A6H5JRV9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV9_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 5.810e-17
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 GLRPGVVLGGDLNSPPNGPVRYLLGELVGPDSDLWRNVETFQW 43
            GLRP VVLGGDLNS P GPVRYL+G+L+GPDSDLW NV TF+W
Sbjct:  660 GLRPAVVLGGDLNSTPGGPVRYLMGDLIGPDSDLWENVGTFKW 702          
BLAST of mRNA_H-elongata_contig139833.2771.1 vs. uniprot
Match: W7T5B9_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5B9_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.820e-6
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    1 GLRPGVVLGGDLNSPPN-GPVRYLLGELVGPDSDLWRNVETFQW 43
            G+RP +VL GDLNS P    +RYL GE +GP+ ++W ++  F W
Sbjct:   59 GVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGW 102          
BLAST of mRNA_H-elongata_contig139833.2771.1 vs. uniprot
Match: W7TNA6_9STRA (Endonuclease/exonuclease/phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA6_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.990e-6
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    1 GLRPGVVLGGDLNSPPN-GPVRYLLGELVGPDSDLWRNVETFQW 43
            G+RP +VL GDLNS P    +RYL GE +GP+ ++W ++  F W
Sbjct:  100 GVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGW 143          
BLAST of mRNA_H-elongata_contig139833.2771.1 vs. uniprot
Match: K8YU24_NANGC (2-phosphodiesterase 12-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YU24_NANGC)

HSP 1 Score: 51.2 bits (121), Expect = 3.030e-6
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    1 GLRPGVVLGGDLNSPPN-GPVRYLLGELVGPDSDLWRNVETFQW 43
            G+RP +VL GDLNS P    +RYL GE +GP+ ++W ++  F W
Sbjct:  127 GVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGW 170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139833.2771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FYP3_ECTSI1.220e-1776.74Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JRV9_9PHAE5.810e-1779.07Endo/exonuclease/phosphatase domain-containing pro... [more]
W7T5B9_9STRA2.820e-647.73Endonuclease/exonuclease/phosphatase n=1 Tax=Nanno... [more]
W7TNA6_9STRA2.990e-647.73Endonuclease/exonuclease/phosphatase n=2 Tax=Monod... [more]
K8YU24_NANGC3.030e-647.732-phosphodiesterase 12-like protein n=1 Tax=Nannoc... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig139833contigH-elongata_contig139833:1287..1418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig139833.2771.1mRNA_H-elongata_contig139833.2771.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig139833 1287..1418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig139833.2771.1 ID=prot_H-elongata_contig139833.2771.1|Name=mRNA_H-elongata_contig139833.2771.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
GLRPGVVLGGDLNSPPNGPVRYLLGELVGPDSDLWRNVETFQW*
back to top