prot_H-elongata_contig139250.2736.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig139250.2736.1
Unique Nameprot_H-elongata_contig139250.2736.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length221
Homology
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM)

HSP 1 Score: 102 bits (255), Expect = 1.210e-23
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 0
Query:    4 IGDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTK-TSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGGEP 137
            +G  S+ LG  + RDR+   L+  Q QYI  + E F ++  T++      G  LSK  +P+    +  M  +PYR++VGALM+ A  TRP IS+A   LA+F+  PGP HW+AA+   +YL  T+D+ +TY  +P
Sbjct:   27 LGPTSFLLGVRVERDRSKRLLSLSQRQYITDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDP 161          
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: A0A6H5J9U3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9U3_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.550e-22
Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = 0
Query:    2 KHIGDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTKTSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITY 133
            K++G+  ++LG    RDR AGT+   Q  YI++V E F V +TS +P++      S +++       EE   +P+RE+VG LMW A+ TRP IS A   +A+ ++ P  +HW+AAQK L YL  T  L + +
Sbjct:   13 KNLGEVKFFLGCAYRRDREAGTIEISQESYIRSVLERFNVVRTSSIPASPTVVNRSVMEN-------EEAGDVPFREVVGCLMWIASQTRPDISNAVRAVARHSNEPKLSHWKAAQKILNYLLGTAHLSLNF 137          
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM)

HSP 1 Score: 103 bits (256), Expect = 1.780e-22
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 0
Query:    4 IGDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTK-TSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGGEP 137
            +G  S+ LG  + RDR+   L+  Q QYI  + E F ++  T++      G  LSK  +P+    +  M  +PYR++VGALM+ A  TRP IS+A   LA+F+  PGP+HW+AA+   +YL  T+D+ +TY  +P
Sbjct:  167 LGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDP 301          
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: A0A4S4L7S0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L7S0_9AGAM)

HSP 1 Score: 102 bits (253), Expect = 2.970e-22
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 0
Query:    4 IGDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTK-TSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGGEP 137
            +G  S+ LG  + RDR+   L+  Q QYI  + E F ++  T++      G  LSK  +P+    +  M  +PYR++VGALM+ A  TRP IS+A   LA+F+  PGP HW+AA+   +YL  T+D+ +TY  +P
Sbjct:   27 LGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDP 161          
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: A0A4V3X9G3_9AGAM (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4V3X9G3_9AGAM)

HSP 1 Score: 103 bits (256), Expect = 1.000e-21
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 0
Query:    4 IGDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTK-TSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGGEP 137
            +G  S+ LG  + RDR+   L+  Q QYI  + E F ++  T++      G  LSK  +P+    +  M  +PYR++VGALM+ A  TRP IS+A   LA+F+  PGP+HW+AA+   +YL  T+D+ +TY  +P
Sbjct:  648 LGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDP 782          
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: A0A4S4K791_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K791_9AGAM)

HSP 1 Score: 102 bits (253), Expect = 1.170e-21
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 0
Query:    4 IGDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTK-TSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGGEP 137
            +G  S+ LG  + RDR+   L+  Q QYI  + E F ++  T++      G  LSK  +P+    +  M  +PYR++VGALM+ A  TRP IS+A   LA+F+  PGP HW+AA+   +YL  T+D+ +TY  +P
Sbjct:  267 LGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDP 401          
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: A0A4S4KQD1_9AGAM (DOMON domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQD1_9AGAM)

HSP 1 Score: 102 bits (254), Expect = 1.410e-21
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 0
Query:    4 IGDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTK-TSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGGEP 137
            +G  S+ LG  + RDR+   L+  Q QYI  + E F ++  T++      G  LSK  +P+    +  M  +PYR++VGALM+ A  TRP IS+A   LA+F+  PGP+HW+AA+   +YL  T+D+ +TY  +P
Sbjct:  244 LGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYTPDP 378          
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: A0A0C3AUA9_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AUA9_9AGAM)

HSP 1 Score: 99.8 bits (247), Expect = 1.630e-21
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 0
Query:    5 GDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTK-TSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGG 135
            G+ S+ LG  ITRDR+A T++  Q  YI ++   FG+   T        G AL++   P  D  V EM  +PYRE+VG+LM+    TRP IS+    L+KF + PG  HW AA++ L++L  +RD  +T GG
Sbjct:   16 GELSWLLGMRITRDRSAKTISLSQSAYIDSLVTRFGLDNATPAATPFVQGVALTRDQCPANDDEVREMANVPYRELVGSLMYLRVATRPDISYHVSVLSKFLNNPGRAHWEAAKRVLRFLKGSRDWKLTLGG 147          
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: A0A4S4KJ58_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KJ58_9AGAM)

HSP 1 Score: 102 bits (253), Expect = 2.400e-21
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 0
Query:    4 IGDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTK-TSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGGEP 137
            +G  S+ LG  + RDR+   L+  Q QYI  + E F ++  T++      G  LSK  +P+    +  M  +PYR++VGALM+ A  TRP IS+A   LA+F+  PGP HW+AA+   +YL  T+D+ +TY  +P
Sbjct:  559 LGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDP 693          
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Match: UPI001E1BA9BB (uncharacterized protein LOC116922675 n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA9BB)

HSP 1 Score: 100 bits (250), Expect = 2.470e-21
Identity = 58/136 (42.65%), Postives = 79/136 (58.09%), Query Frame = 0
Query:    7 ASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTK-TSIVPSAAGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQLAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGGEPGGDQ 141
            A  +LG  I R+R    L+  Q   + T+ + F +    S+   A  G  LS   SPQTD  VEEM QIPY+E VGAL++ +T TRP IS+A  Q+AKFN  PG  HW+A ++  +YL  TR+ GI +   P G +
Sbjct:  210 AGRFLGITIDRNRERRHLSISQPDAVDTILKKFKMGDCNSVSTPAEPGLKLSLNMSPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGILFSPNPSGKE 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139250.2736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4K4A0_9AGAM1.210e-2339.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J9U3_9PHAE1.550e-2238.64Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A4S4LBP1_9AGAM1.780e-2239.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4L7S0_9AGAM2.970e-2239.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4V3X9G3_9AGAM1.000e-2139.26Integrase catalytic domain-containing protein (Fra... [more]
A0A4S4K791_9AGAM1.170e-2139.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4KQD1_9AGAM1.410e-2139.26DOMON domain-containing protein n=1 Tax=Phellinidi... [more]
A0A0C3AUA9_9AGAM1.630e-2140.91Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A4S4KJ58_9AGAM2.400e-2139.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001E1BA9BB2.470e-2142.65uncharacterized protein LOC116922675 n=1 Tax=Daphn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig139250contigH-elongata_contig139250:498..1269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig139250.2736.1mRNA_H-elongata_contig139250.2736.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig139250 66..1388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig139250.2736.1 ID=prot_H-elongata_contig139250.2736.1|Name=mRNA_H-elongata_contig139250.2736.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=221bp
MKHIGDASYYLGYHITRDRNAGTLNFDQHQYIQTVAECFGVTKTSIVPSA
AGGKALSKLDSPQTDAGVEEMCQIPYREIVGALMWAATMTRPKISFAPHQ
LAKFNDYPGPTHWRAAQKGLQYLWRTRDLGITYGGEPGGDQAIGVMAVAS
SESEYVALAEMVNELRFLRQVKAFITSQIDVAITIRESRWRKTASAVDER
GRWILSITLSVTRPMGGWFT*
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