prot_H-elongata_contig13554.2516.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig13554.2516.1
Unique Name	prot_H-elongata_contig13554.2516.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	93

Homology

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: D7FV40_ECTSI (Valine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV40_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 5.550e-47
Identity = 79/93 (84.95%), Postives = 87/93 (93.55%), Query Frame = 0

Query:    1 ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAGEALMVAPWPKVDDVALAVDEQAIDRFESLQSLVRSIRNVKAEYRVEPGKKVPAVV 93
            ARS+RRTLVYVFDTCLRLLHPFMP++TEALWQQLPR GEALMVAPWPKVDD  LAVDE AI RFE++QSLVRS+RN KAEY+VEPGKK+PAVV
Sbjct:  816 ARSSRRTLVYVFDTCLRLLHPFMPFITEALWQQLPRTGEALMVAPWPKVDDAPLAVDELAIGRFEAVQSLVRSVRNAKAEYKVEPGKKIPAVV 908

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: A0A836CET5_9STRA (Valine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CET5_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.000e-36
Identity = 65/93 (69.89%), Postives = 78/93 (83.87%), Query Frame = 0

Query:    1 ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAGEALMVAPWPKVDDVALAVDEQAIDRFESLQSLVRSIRNVKAEYRVEPGKKVPAVV 93
            A++ARR LVYVFDTCLRLLHPFMP+VTEALWQQLP AG+AL+VAPWP++ D  L VD  A  RFE+ Q+LVRSIRN +AEY+VEP +K+ A V
Sbjct:  773 AQTARRVLVYVFDTCLRLLHPFMPFVTEALWQQLPHAGDALIVAPWPQMGDAPLPVDAAATARFEAFQALVRSIRNARAEYKVEPARKISANV 865

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: A0A7S2JDW8_9EUKA (Valine--tRNA ligase (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JDW8_9EUKA)

HSP 1 Score: 139 bits (351), Expect = 1.010e-36
Identity = 61/93 (65.59%), Postives = 78/93 (83.87%), Query Frame = 0

Query:    1 ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAGEALMVAPWPKVDDVALAVDEQAIDRFESLQSLVRSIRNVKAEYRVEPGKKVPAVV 93
            A +ARRTLVYV D+CLRLLHPFMP++TE LWQ+LP  G +LM+APWP+ DD+AL  D++A+ +F SLQ+L RS+RN +AEYRVEPGKK+ A V
Sbjct:  375 AATARRTLVYVLDSCLRLLHPFMPFITEELWQRLPHEGPSLMIAPWPQRDDIALPTDDEAVAQFGSLQALARSVRNARAEYRVEPGKKIAATV 467

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: A0A7S3F538_9EUKA (Valine--tRNA ligase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F538_9EUKA)

HSP 1 Score: 127 bits (320), Expect = 7.620e-34
Identity = 58/92 (63.04%), Postives = 72/92 (78.26%), Query Frame = 0

Query:    2 RSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAGEALMVAPWPKVDDVALAVDEQAIDRFESLQSLVRSIRNVKAEYRVEPGKKVPAVV 93
            + A+RTLVYV D+CLRLLHPFMP++TE +WQ+LP  G +LM+A WP+ DD  L VD  A  RF SLQ+LVRS+RN +AEYRVEPGK + A V
Sbjct:  119 QQAQRTLVYVLDSCLRLLHPFMPFITEEVWQRLPHEGPSLMIADWPQRDDEPLCVDADAEQRFGSLQALVRSVRNARAEYRVEPGKLIAATV 210

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: A0A7S3XNU9_HETAK (Valine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNU9_HETAK)

HSP 1 Score: 132 bits (331), Expect = 9.310e-34
Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = 0

Query:    1 ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAGEALMVAPWPK-VDDVALAVDEQAIDRFESLQSLVRSIRNVKAEYRVEPGKKVPAVV 93
            A  ARR LVYVFDTCLRLLHPFMPYVTE LWQ+LPRAG+ALMVAPWPK   + AL V   A+ R+ +LQ+LVR++RN +AEY V+ G+KV A V
Sbjct:  763 AAMARRVLVYVFDTCLRLLHPFMPYVTEVLWQELPRAGDALMVAPWPKPAGEAALPVAAGAVRRYRALQALVRAVRNARAEYNVDQGRKVEAAV 856

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: A0A4D9D6S5_9STRA (Valine--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6S5_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.370e-33
Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 0

Query:    1 ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAGEALMVAPWPKVD-DVALAVDEQAIDRFESLQSLVRSIRNVKAEYRV----------EPGKKVPAVV 93
            A + RR LVYVFDTCLRLLHPFMPY+TE LWQQLP  GEAL+VAPWP+ + +  L VD +AID+F   Q+LVR+IRN +AEY+V          EPGKKV A +
Sbjct:   63 ASTTRRVLVYVFDTCLRLLHPFMPYITEVLWQQLPHDGEALIVAPWPQEEGEEKLHVDREAIDQFRRFQALVRAIRNARAEYKVRREAGREGGVEPGKKVAAQI 166

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: A0A6H5L030_9PHAE (Valine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L030_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 6.210e-33
Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 0

Query:    1 ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAGEALMVAPWPKVDDVALAVDEQAIDR 63
            ARS+RRTLVYVFDTCLRLLHPFMP+VTEALWQQLPR GEALMVAPWPKVDD  LAVDE AI R
Sbjct:   79 ARSSRRTLVYVFDTCLRLLHPFMPFVTEALWQQLPRTGEALMVAPWPKVDDAPLAVDELAIGR 141

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: A0A7S4ETN8_CHRCT (Valine--tRNA ligase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETN8_CHRCT)

HSP 1 Score: 127 bits (318), Expect = 5.300e-32
Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = 0

Query:    1 ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAGEALMVAPWPKVDDVALAVDEQAIDRFESLQSLVRSIRNVKAEYRVEPGKKVPAVV 93
            A+ +RR LVYV DTCLRLLHP+MPY+TE LWQ+LP  GEALM++ WP+ +   LA D QA  +FES+Q+LVRS+RN +AEYRVE  KKV A V
Sbjct:  827 AQRSRRVLVYVLDTCLRLLHPYMPYITEELWQKLPHEGEALMISNWPQAEGDVLASDSQAEKQFESIQALVRSVRNARAEYRVEGFKKVAATV 919

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: A0A7S2Y128_9STRA (Valine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y128_9STRA)

HSP 1 Score: 124 bits (310), Expect = 8.450e-32
Identity = 67/100 (67.00%), Postives = 74/100 (74.00%), Query Frame = 0

Query:    1 ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRA--GEALMVAPWPKV-----DDVALAVDEQAIDRFESLQSLVRSIRNVKAEYRVEPGKKVPAVV 93
            A+SARR LVYVFDTCLRLLHPFMP+VTEALWQQLP+     ALM A WPK       +  L VDE A  +F SLQSLVR+IRN +AEYRVEP KKV A V
Sbjct:  185 AQSARRVLVYVFDTCLRLLHPFMPFVTEALWQQLPKTTTSPALMTAAWPKPAALDGKESDLEVDEVAEAQFRSLQSLVRAIRNARAEYRVEPNKKVEARV 284

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BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Match: A0A7S2AXJ4_9STRA (Valine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXJ4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 8.620e-31
Identity = 61/98 (62.24%), Postives = 76/98 (77.55%), Query Frame = 0

Query:    1 ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAG----EALMVAPWPKVDDVA-LAVDEQAIDRFESLQSLVRSIRNVKAEYRVEPGKKVPAVV 93
            A+ + + LVYVFDTCLRLLHP+MPYVTE LWQQLP+      EALM A WPK+DD + L+ D +A+  F +LQ+LVRSIRN +AEY+VEPGKK+ A V
Sbjct:  646 AQVSLKVLVYVFDTCLRLLHPYMPYVTEILWQQLPKTADSTNEALMTATWPKLDDESDLSTDPEAMAHFTALQALVRSIRNARAEYQVEPGKKIAAQV 743

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot

BLAST of mRNA_H-elongata_contig13554.2516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FV40_ECTSI	5.550e-47	84.95	Valine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ...	[more]
A0A836CET5_9STRA	1.000e-36	69.89	Valine--tRNA ligase n=1 Tax=Tribonema minus TaxID=...	[more]
A0A7S2JDW8_9EUKA	1.010e-36	65.59	Valine--tRNA ligase (Fragment) n=1 Tax=Haptolina b...	[more]
A0A7S3F538_9EUKA	7.620e-34	63.04	Valine--tRNA ligase n=1 Tax=Haptolina ericina TaxI...	[more]
A0A7S3XNU9_HETAK	9.310e-34	67.02	Valine--tRNA ligase n=1 Tax=Heterosigma akashiwo T...	[more]
A0A4D9D6S5_9STRA	1.370e-33	60.58	Valine--tRNA ligase n=1 Tax=Nannochloropsis salina...	[more]
A0A6H5L030_9PHAE	6.210e-33	88.89	Valine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 13...	[more]
A0A7S4ETN8_CHRCT	5.300e-32	63.44	Valine--tRNA ligase n=1 Tax=Chrysotila carterae Ta...	[more]
A0A7S2Y128_9STRA	8.450e-32	67.00	Valine--tRNA ligase n=1 Tax=Fibrocapsa japonica Ta...	[more]
A0A7S2AXJ4_9STRA	8.620e-31	62.24	Valine--tRNA ligase n=1 Tax=Dictyocha speculum Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013155	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding	PFAM	PF08264	Anticodon_1	coord: 3..91 e-value: 1.7E-20 score: 73.5
None	No IPR available	GENE3D	1.10.730.10		coord: 1..84 e-value: 2.0E-23 score: 84.7
None	No IPR available	PANTHER	PTHR11946	VALYL-TRNA SYNTHETASES	coord: 2..92
None	No IPR available	PANTHER	PTHR11946:SF93	VALINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 2	coord: 2..92
IPR009080	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	SUPERFAMILY	47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	coord: 2..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig13554	contig	H-elongata_contig13554:7063..7797 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig13554.2516.1	mRNA_H-elongata_contig13554.2516.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig13554 7063..7797 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig13554.2516.1 ID=prot_H-elongata_contig13554.2516.1|Name=mRNA_H-elongata_contig13554.2516.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
ARSARRTLVYVFDTCLRLLHPFMPYVTEALWQQLPRAGEALMVAPWPKVD
DVALAVDEQAIDRFESLQSLVRSIRNVKAEYRVEPGKKVPAVV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013155	M/V/L/I-tRNA-synth_anticd-bd
IPR009080	tRNAsynth_Ia_anticodon-bd