prot_H-elongata_contig133624.2388.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig133624.2388.1
Unique Nameprot_H-elongata_contig133624.2388.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: D7G4I4_ECTSI (Histone H3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4I4_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 1.020e-69
Identity = 119/121 (98.35%), Postives = 119/121 (98.35%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRKQLATKAA  PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAA-PPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 120
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.020e-68
Identity = 120/136 (88.24%), Postives = 121/136 (88.97%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRKQLATKAARK               PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: A0A1Z5K8H0_FISSO (Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5K8H0_FISSO)

HSP 1 Score: 211 bits (536), Expect = 2.020e-68
Identity = 120/136 (88.24%), Postives = 121/136 (88.97%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRKQLATKAARK               PGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)

HSP 1 Score: 209 bits (533), Expect = 7.030e-68
Identity = 119/136 (87.50%), Postives = 121/136 (88.97%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRKQLATKAARK               PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    7 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 142
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: A0A7S1BJN3_9STRA (Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A7S1BJN3_9STRA)

HSP 1 Score: 209 bits (533), Expect = 9.150e-68
Identity = 119/136 (87.50%), Postives = 121/136 (88.97%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRKQLATKAARK               PGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:   15 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 150
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: K0S7I6_THAOC (Histone domain-containing protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=K0S7I6_THAOC)

HSP 1 Score: 211 bits (536), Expect = 2.190e-67
Identity = 120/136 (88.24%), Postives = 121/136 (88.97%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRKQLATKAARK               PGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:   74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 209
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: A0A3R7LZR1_PENVA (Histone H3 n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7LZR1_PENVA)

HSP 1 Score: 207 bits (527), Expect = 3.650e-67
Identity = 115/128 (89.84%), Postives = 120/128 (93.75%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAAR-------KPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRKQLATKAAR       +PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 128
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: UPI0008163789 (LOW QUALITY PROTEIN: histone H3-like n=1 Tax=Corvus brachyrhynchos TaxID=85066 RepID=UPI0008163789)

HSP 1 Score: 207 bits (527), Expect = 4.030e-67
Identity = 116/131 (88.55%), Postives = 120/131 (91.60%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK----------PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRKQLATKAARK          PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAAAPXDRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 131
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: D7G4I9_ECTSI (Similar to histone H3.2 n=2 Tax=PX clade TaxID=569578 RepID=D7G4I9_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 4.750e-67
Identity = 119/136 (87.50%), Postives = 120/136 (88.24%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARK---------------PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTG +APRKQLATKAARK               PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGRQAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Match: A0A6V7U9E7_9BILA (Histone H3 n=1 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7U9E7_9BILA)

HSP 1 Score: 207 bits (526), Expect = 4.860e-67
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKP-----GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 121
            MARTKQTARKSTGGKAPRKQLATKAARK      GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERT 126
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133624.2388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4I4_ECTSI1.020e-6998.35Histone H3 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
W4GZ05_9STRA2.020e-6888.24Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ... [more]
A0A1Z5K8H0_FISSO2.020e-6888.24Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepI... [more]
A0A6V1P6C6_HETAK7.030e-6887.50Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A7S1BJN3_9STRA9.150e-6887.50Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A... [more]
K0S7I6_THAOC2.190e-6788.24Histone domain-containing protein n=8 Tax=Bacillar... [more]
A0A3R7LZR1_PENVA3.650e-6789.84Histone H3 n=1 Tax=Penaeus vannamei TaxID=6689 Rep... [more]
UPI00081637894.030e-6788.55LOW QUALITY PROTEIN: histone H3-like n=1 Tax=Corvu... [more]
D7G4I9_ECTSI4.750e-6787.50Similar to histone H3.2 n=2 Tax=PX clade TaxID=569... [more]
A0A6V7U9E7_9BILA4.860e-6792.06Histone H3 n=1 Tax=Meloidogyne enterolobii TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 3..17
score: 37.39
coord: 99..120
score: 94.86
coord: 43..60
score: 97.46
coord: 65..83
score: 76.89
coord: 83..99
score: 96.93
coord: 19..40
score: 52.37
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 20..121
e-value: 5.8E-68
score: 241.8
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..120
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 52..60
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 15..21
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..117
e-value: 1.9E-47
score: 160.9
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..121
e-value: 1.8E-63
score: 214.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..118
NoneNo IPR availablePANTHERPTHR11426:SF224coord: 1..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig133624contigH-elongata_contig133624:1163..1573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig133624.2388.1mRNA_H-elongata_contig133624.2388.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig133624 1163..1573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig133624.2388.1 ID=prot_H-elongata_contig133624.2388.1|Name=mRNA_H-elongata_contig133624.2388.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MARTKQTARKSTGGKAPRKQLATKAARKPGTVALREIRRYQKSTELLIRK
LPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHA
KRVTIMPKDIQLARRIRGERS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold