prot_H-elongata_contig132636.2334.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: D7FNY3_ECTSI (DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY3_ECTSI) HSP 1 Score: 196 bits (499), Expect = 2.440e-57 Identity = 97/113 (85.84%), Postives = 102/113 (90.27%), Query Frame = 0
Query: 1 MCQTYGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMADFSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDLRQPAE 113
+CQTYGVEAARASIVAEI GVFG YGI+VDPRHLGLVADHMTF GGYR +NR GMADFSSPC QMSFETTT F+ KAAVA SD+LKSPSARIVMGRVG FGTGMFDLRQPAE
Sbjct: 528 VCQTYGVEAARASIVAEITGVFGAYGIAVDPRHLGLVADHMTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGNFGTGMFDLRQPAE 640
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE) HSP 1 Score: 196 bits (497), Expect = 1.070e-55 Identity = 96/113 (84.96%), Postives = 103/113 (91.15%), Query Frame = 0
Query: 1 MCQTYGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMADFSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDLRQPAE 113
+CQTYGVEAARASIV+EI GVFG YGI+VDPRHLGLVADHMTF GGYR +NR GMADFSSPC QMSFETTT F+ KAAVA SD+LKSPSARIVMGRVG+FGTGMFDLRQPAE
Sbjct: 1757 VCQTYGVEAARASIVSEITGVFGAYGIAVDPRHLGLVADHMTFDGGYRPLNRAGMADFSSPCLQMSFETTTDFMAKAAVARSSDRLKSPSARIVMGRVGSFGTGMFDLRQPAE 1869
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.620e-43 Identity = 79/114 (69.30%), Postives = 90/114 (78.95%), Query Frame = 0
Query: 1 MCQTYGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMADFSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDLRQPAEI 114
M +YGVEA RA+I EIA VF VYGI VD RHLGL+AD+MTFYGGYRAMNRIGM D +SP QMSFETT +FL +AA+ +KLKSPSARIVMG+VG FGTG FDL P E+
Sbjct: 1548 MLMSYGVEACRAAITKEIAAVFAVYGIGVDARHLGLIADYMTFYGGYRAMNRIGMKDIASPFLQMSFETTASFLVQAALDSKVEKLKSPSARIVMGQVGDFGTGQFDLMVPVEV 1661
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: A0A7S2G4R6_9STRA (DNA-directed RNA polymerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4R6_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.260e-39 Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 0
Query: 4 TYGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMAD-FSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDL 108
TYGVEAAR +IVAE+ GVF VYGIS+D RHL L+AD MTF GGYRA NR+G+A+ SSP QMSFETT FLT+AAV G D+L+SPSARIVMG++ GTG F+L
Sbjct: 77 TYGVEAARGAIVAEVRGVFDVYGISIDARHLSLIADTMTFSGGYRAFNRLGIAEGSSSPYLQMSFETTATFLTEAAVRGDPDRLQSPSARIVMGQLAKQGTGAFEL 182
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: W7TZA0_9STRA (DNA-directed RNA polymerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZA0_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.000e-38 Identity = 73/114 (64.04%), Postives = 90/114 (78.95%), Query Frame = 0
Query: 1 MCQTYGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMADFSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDLRQPAEI 114
M QTYGVEAARA+IV EI GVFG YGI+VDPRHLGLVAD MT+ GG+RA+NRIGM++ SSP QMSFETT FLT+AA+ D L++PSA++VMG+ GTG FD+ P ++
Sbjct: 1146 MHQTYGVEAARATIVKEIKGVFGAYGIAVDPRHLGLVADFMTYQGGFRALNRIGMSEVSSPFLQMSFETTATFLTEAALNSEKDDLQTPSAKLVMGQPTGNGTGSFDIMIPVDM 1259
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: K8YRY5_NANGC (DNA-directed RNA polymerase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRY5_NANGC) HSP 1 Score: 147 bits (371), Expect = 1.020e-38 Identity = 73/114 (64.04%), Postives = 90/114 (78.95%), Query Frame = 0
Query: 1 MCQTYGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMADFSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDLRQPAEI 114
M QTYGVEAARA+IV EI GVFG YGI+VDPRHLGLVAD MT+ GG+RA+NRIGM++ SSP QMSFETT FLT+AA+ D L++PSA++VMG+ GTG FD+ P ++
Sbjct: 1736 MHQTYGVEAARATIVKEIKGVFGAYGIAVDPRHLGLVADFMTYQGGFRALNRIGMSEVSSPFLQMSFETTATFLTEAALNSEKDDLQTPSAKLVMGQPTGNGTGSFDIMIPVDM 1849
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: A0A7R9ZT77_9STRA (DNA-directed RNA polymerase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZT77_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.130e-38 Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = 0
Query: 5 YGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMADFSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDL 108
YGVEAAR +IV ++ VFG YGI VDPRHL L+AD+MT+ GGY AMNRIGM D SSP QMSFETT FLT+AA++G D+LKSPSA IV+GR GTG F L
Sbjct: 41 YGVEAARNNIVDQVRSVFGAYGIEVDPRHLTLIADYMTYSGGYTAMNRIGMKDTSSPFLQMSFETTATFLTQAALSGTCDQLKSPSANIVVGRPIRHGTGAFSL 144
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: A0A7S0N8V3_9CHLO (DNA-directed RNA polymerase n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N8V3_9CHLO) HSP 1 Score: 133 bits (335), Expect = 1.520e-37 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 0
Query: 1 MCQTYGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMADFSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDLRQ 110
M QTYG+EAARA++V E++GVFGVYGI VD RHL L+AD MTF G YRA NR+G+ +SP +MSFET T FLT A + G +D + SPSARIVMGRV GTG L Q
Sbjct: 25 MMQTYGIEAARAALVKEVSGVFGVYGIGVDNRHLSLIADFMTFSGDYRACNRMGINSSTSPFLKMSFETATNFLTDATLHGQTDTMGSPSARIVMGRVVEMGTGAISLLQ 134
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: A0A7S1CFD6_9STRA (DNA-directed RNA polymerase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFD6_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.270e-37 Identity = 72/110 (65.45%), Postives = 86/110 (78.18%), Query Frame = 0
Query: 4 TYGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMADFSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDLRQPAE 113
TYGVEAAR++I E+ VFGVYGISVDPRHLGL+AD+MT GGYRA+NRIGM +SP +MSFETTT FLT+A + G ++ + SPSARIVMGRV GTG FDL P +
Sbjct: 1662 TYGVEAARSAITKEVTAVFGVYGISVDPRHLGLIADYMTSSGGYRALNRIGMDARASPYLKMSFETTTKFLTQACLHGEAENMDSPSARIVMGRVVGSGTGAFDLLAPLD 1771
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Match: A0A507ES14_9FUNG (DNA-directed RNA polymerase subunit n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507ES14_9FUNG) HSP 1 Score: 143 bits (361), Expect = 2.270e-37 Identity = 74/111 (66.67%), Postives = 85/111 (76.58%), Query Frame = 0
Query: 3 QTYGVEAARASIVAEIAGVFGVYGISVDPRHLGLVADHMTFYGGYRAMNRIGMADFSSPCQQMSFETTTAFLTKAAVAGHSDKLKSPSARIVMGRVGTFGTGMFDLRQPAE 113
+TYGVEAARASI+ EI VFGVYGISVD RHL L+AD+MTF GGY+A NRIGM SP QMSFETT FLT A V+G D L+SPSARIV+G+V GTG FD+R P +
Sbjct: 1694 KTYGVEAARASIMNEIGAVFGVYGISVDRRHLSLIADYMTFEGGYKAFNRIGMNSNPSPFAQMSFETTAKFLTTATVSGDVDTLESPSARIVLGQVVRGGTGAFDIRVPLQ 1804 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132636.2334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig132636.2334.1 ID=prot_H-elongata_contig132636.2334.1|Name=mRNA_H-elongata_contig132636.2334.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bpback to top |