mRNA_H-elongata_contig13142.2267.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13142.2267.1
Unique NamemRNA_H-elongata_contig13142.2267.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A6H5L771_9PHAE (P4Hc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L771_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 3.420e-112
Identity = 171/250 (68.40%), Postives = 204/250 (81.60%), Query Frame = 1 
Query:    1 HRWILFSSQHVDGLTAYSDAMWNPKIMTMFTMGEFDLEAIVSRDDDGNLKMSLESALTRTEALMEAASETCRRSPEVIKALARRRGVAAAEGSCVIGAAGDPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNADLNNPKSVTAPLYR 750
            H +++   QH +GLT Y   +WNPKIM MFTMGEFDLE  VSRD +GNL    ESA+TRT  LME AS+ CR+SPEV+KA A+R+G+AAAEGSC I  A   NEM PEF  CLT+A+A+DLAKKE EANKSMRMLE+VGDRARNYTC DP+M+T+N+SL SV W+DPEG ++Y+A++FLD+PAAKIYLLDNFA+ +EC +L   ASPHLQDATVN GAGK+ LS+ARRAKAGGV ADLNN  SVTAPLYR
Sbjct:   74 HSFLVVDDQHAEGLTNYKPELWNPKIMAMFTMGEFDLEVTVSRDANGNLVHVAESAMTRTTRLMETASKECRQSPEVVKATAKRKGLAAAEGSCTIAGAQGENEMVPEFAECLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADPKMDTTNSSLPSVQWKDPEGGLTYNAQVFLDDPAAKIYLLDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSNARRAKAGGVGADLNNKNSVTAPLYR 323
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BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A835YYR1_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR1_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.230e-15
Identity = 60/187 (32.09%), Postives = 99/187 (52.94%), Query Frame = 1 
Query:   88 FTMGEFD-LEAIVSRDDDGNLKMSLESALTRTEALMEAASETCRRSPEVIKALARRRGVAAAEGSCVIGAAGD--PNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSL----TRQASPHL 627
            FTM  +D    I S   DG+L++   ++  +  A MEAA+E C+R         +R+   A     ++    +    E+ P+ +    +       +++ E  K  +M+++VGDR RNYTCVDP+M+T+  +L ++TW   + +V      FL+EP +KI L+DNFAS  EC +L    TR  + H+
Sbjct:  103 FTMSPWDDTVTITSNPYDGSLELHQTNSFKKVGASMEAAAEACKRKH-------KRKNAEALLDKELLDCMSNMLATEVAPKASHRCRKLKFIGYFEEDHELAKQRKMMDIVGDRLRNYTCVDPQMKTTEKALRTITWDGRKASV------FLEEPDSKIILVDNFASEAECDALIAAGTRTLTTHI 276
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BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A836CGT5_9STRA (P4Hc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.610e-12
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 1 
Query:  373 EKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAG 696
            +KE +K  +M+  VG+R RNYTC+DP+MET+   L +  W        ++ K+FL+E  ++I L+DNF S  EC +L    +  L+ ATV AG  +   S+ARRA AG
Sbjct:  170 DKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKWS------GHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATV-AGQTQRDKSAARRAMAG 270
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BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A7S2NTX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NTX2_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.450e-11
Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 1 
Query:  271 EGSCVIGAAGDPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNA--DLNNPKSVTAPLYR 750
            +GS + G A    ++  E   C+  +VA+ LA+  +E     ++ + + ++  NYTC D E+E+S     SV W +      Y+   FLD   AKI++++NF +AEEC ++   A P L  A+V   +G S  S AR+A   G+    +L +     A L R
Sbjct:  108 QGSNLTGEA--TTKVLDEMAECIEESVAKKLAEANEEVVFQAKIRKEIAEKWENYTCADLEVESSKPKEKSV-WVNRNEYRRYNVGKFLDRDEAKIHVIENFITAEECEAMESAAEPRLHRASVADESGGSKFSEARKAMQAGIKVRWELEHKSDPIAVLSR 266
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BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A7S1CW22_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CW22_CYCTE)

HSP 1 Score: 68.9 bits (167), Expect = 2.920e-10
Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 1 
Query:  301 DPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSV--TWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNADLNNP 723
            D  E   E   CL +++ + + + E+E     ++ E++G     YTC D  + T  T    V  +W DP+    +S ++FLD PAAKI+++D+F S  +C    ++A P+L+ A V  G G    S  R+A    + AD++ P
Sbjct:   38 DSKETMDEMMECLEKSMNDKIQEVEEEIAFGNQLREVMGPYFEYYTCHDWRLPTVATGDKVVRESWVDPQTAREHSVRVFLDRPAAKIHMIDDFVSERQCRVAQKEAQPYLRPAKVFDGEGGLTTSGNRKA----LQADVDVP 176
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BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A7R9Z244_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z244_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.090e-8
Identity = 48/182 (26.37%), Postives = 85/182 (46.70%), Query Frame = 1 
Query:  220 SPEVIKALARRRGVAAAEGSCVIGAAGDPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNA------DLNNPKSVTAPLY 747
            S EV+ +  +RR   +   +    +A +  +   +  AC+   VA +L +  +E      +   + +   NYTC D E+ T+   +   TW +     +   ++  D P+AK++L+ NF + +EC ++   A P L  ATV  G G S LS +R+A   G+        D N   +V+  +Y
Sbjct:  111 SAEVLLSECQRRAAESISNTKGSVSADEAKKSIEDLVACVEARVAGELERSNEEVAFQASIRTKMAEHLENYTCADEELPTTEP-IQETTWINR--GAARKVQVLHDRPSAKVHLISNFITEDECEAMEDAARPLLHKATVADGKGGSRLSESRKALQAGIKVPWEKEKDGNGIATVSRKVY 289
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BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A7S2V3P9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3P9_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 4.670e-5
Identity = 27/77 (35.06%), Postives = 41/77 (53.25%), Query Frame = 1 
Query:  412 VGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATV 642
            + +  R   C DP ++T+NT+L + TWR    N  +     LD   AK+Y++ +F S EEC     +A P L  +TV
Sbjct:   44 ISEELRMRICDDPTIDTTNTTLDTRTWRHNAKN--HQVDRLLDREEAKLYVVHDFVSEEECQFFMDKARPWLHPSTV 118
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L771_9PHAE3.420e-11268.40P4Hc domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YYR1_9STRA1.230e-1532.09Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A836CGT5_9STRA1.610e-1241.67P4Hc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2NTX2_9STRA5.450e-1131.48Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1CW22_CYCTE2.920e-1031.47Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7R9Z244_9STRA3.090e-826.37Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2V3P9_9STRA4.670e-535.06Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13142contigH-elongata_contig13142:121..4067 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.9
Seed ortholog evalue1.6e-92
Seed eggNOG ortholog2880.D8LFZ0
KEGG rclassRC00478
KEGG koko:K00472
KEGG ReactionR01252
KEGG Pathwayko00330,ko01100,map00330,map01100
EggNOG free text desc.procollagen-proline 4-dioxygenase activity
EggNOG OGsKOG1591@1,KOG1591@2759
EC1.14.11.2
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionvon Hippel-Lindau disease tumour suppressor, beta domain
Ec32 orthologEc-21_005220.1
Exons4
Model size750
Cds size750
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13142.2267.1prot_H-elongata_contig13142.2267.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13142 121..4067 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929780.344778-CDS-H-elongata_contig13142:120..2401622929780.344778-CDS-H-elongata_contig13142:120..240Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13142 121..240 -
1691679154.8013747-CDS-H-elongata_contig13142:120..2401691679154.8013747-CDS-H-elongata_contig13142:120..240Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13142 121..240 -
1622929780.3679895-CDS-H-elongata_contig13142:1300..14021622929780.3679895-CDS-H-elongata_contig13142:1300..1402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13142 1301..1402 -
1691679154.8116395-CDS-H-elongata_contig13142:1300..14021691679154.8116395-CDS-H-elongata_contig13142:1300..1402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13142 1301..1402 -
1622929780.3844872-CDS-H-elongata_contig13142:2128..25421622929780.3844872-CDS-H-elongata_contig13142:2128..2542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13142 2129..2542 -
1691679154.820504-CDS-H-elongata_contig13142:2128..25421691679154.820504-CDS-H-elongata_contig13142:2128..2542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13142 2129..2542 -
1622929780.4007573-CDS-H-elongata_contig13142:3953..40671622929780.4007573-CDS-H-elongata_contig13142:3953..4067Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13142 3954..4067 -
1691679154.8302772-CDS-H-elongata_contig13142:3953..40671691679154.8302772-CDS-H-elongata_contig13142:3953..4067Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13142 3954..4067 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13142.2267.1

>prot_H-elongata_contig13142.2267.1 ID=prot_H-elongata_contig13142.2267.1|Name=mRNA_H-elongata_contig13142.2267.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
HRWILFSSQHVDGLTAYSDAMWNPKIMTMFTMGEFDLEAIVSRDDDGNLK
MSLESALTRTEALMEAASETCRRSPEVIKALARRRGVAAAEGSCVIGAAG
DPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDP
EMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSS
LTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNADLNNPKSVTAPLYR
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mRNA from alignment at H-elongata_contig13142:121..4067-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13142.2267.1 ID=mRNA_H-elongata_contig13142.2267.1|Name=mRNA_H-elongata_contig13142.2267.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3947bp|location=Sequence derived from alignment at H-elongata_contig13142:121..4067- (Himanthalia elongata Himel1 dioecious)
CATCGGTGGATTTTGTTTTCATCGCAGCACGTCGACGGGCTGACGGCCTA
CAGCGATGCCATGTGGAACCCAAAGATCATGACCATGTTTACGATGGGCG
AGTTCGACCTCGAGGTCAGACGAAGGAGAGCGGGGAAAGATCAAAGAGGA
TGAGAGAAGAAACAATGTTGGTCGTTTTTTAGCTCACGACCTTGATAAGT
TTTATTGTCATTACCCAAAGCTCAAAAATCTCGAGACTATCCAAAAGTTA
TTCTCAGCGTACTTATATGCTTTACTGTATGTATGTATGTATGTATTTCA
TCCTGAACCCCTATGGAACTGGATCCGTTTTTTCATACTAAATTCAATAT
AAAACTTGAAATTCAGTTCCACAAGGGTTAAAGAAAGATATGTCACACTC
GGGGTAGGTGGGTCGCGGGAGGTTGATAAGTTCCTTGGTTTGTCATGTCC
AGGGAGCGCTTCAAAGCACATGCGCTGTCATCCTTTTGTAAAAGATAGTA
AATTAGGGCTTGTGTGCCCTTCCACTCGCTCGATTTTGCCTCCACCCGTC
GGGAAATGGTATTTGAGCCAACGTTTATCCTACAGCCCGTCGATCCATGG
GGGTAGAACCGCCTCTGGTTCTCTCTGTGGCTGTATCGCACATGTCCACT
GTACCAATAGTGGGTGTGGGAAAAGAGAGGCGCACAATAACTGGTCAATG
GGGTTCCCTGAATAGGCTGTTACACCCGTTTCTCAAGCTACCTTGAGGAT
TGTTGGCTCTGTGCCGGTGGACTCTCGGTGGTGAATGCCATCGGTACACA
ATTGCGTGACCTGATGAAATCGGGATTGGTTCGATGGCGGTTGATGTTAG
AGATAGACGCGTCGCGGAAAACGAGAGGATCCCGGGAGTACGCGCTATAT
TTGACCTGAGTTGAGAGAATGAGCAGACTGACGCGGCGCAGGACGGCCGA
ACCCGTCTGGCGAGTCCAAATTCTCAGACGCGAACGGGGACAGGGAAAAT
TTGTATTCCCTGTTCTTCAGCTGACCACAAGCAGCAGGCAATCAAATCGG
TTGATCCTTTCTCTGATATGTGATGACTTTGCATACACGCACACAAGGCT
CATTCCCGGTGTTTCACTGCCTAGCGTGCACGTTCCGAGCATCAGTTAGG
CCGTGTTGTCGGGCTTCGCACCGCACACCTTCGAGCTACGCCCAGAGAGC
TAGGTATATTTTACCATTTCAGTATTTCGTGGATCTAACCCGATCCTAGC
TCAAGCTCTAACCCAAAAACACATACCCTAGCTGCCAGCGAGGTTCCGGC
TGCAACCGTCATGCCCACTCTTCCCATCGTGGGTGTGGGAAAATAGAAGC
GTACATTACTTGGTCCATGGGGTTTTACCTGAATAGGCTACCCTCAACGC
TGGTTGAAAGAACCATGTCCACCATCCGTCCACCTCCATACCAAAACCCC
GAACGGTCATGCTCCTGCTGTTGATGATGATTTTGATAATGCTGCTGCAC
CGGGGGAAAATATATACTTTAAAAGGCCATCGTGTCGCGAGACGATGACG
GTAACCTTAAGATGAGCCTGGAGAGCGCGCTCACGCGGACAGAAGCGCTG
ATGGAGGCTGCGTCGGAGACGTGCCGGCGCAGCCCCGAGGTTATCAAGGC
TCTGGCGAGGCGGCGTGGGGTGGCGGCGGCGGAGGGCTCATGCGTCATCG
GTGCGGCCGGGGACCCTAACGAGATGACCCCGGAGTTCAACGCGTGCCTG
ACCCGCGCGGTCGCCGAGGACCTCGCCAAGAAGGAGAAAGAGGCCAACAA
GAGCATGCGCATGCTGGAGATGGTGGGTGACCGCGCGCGGAACTACACGT
GCGTCGACCCGGAGATGGAAACCAGCAACACTTCTCTTTCGAGCGTGACC
TGGAGAGACCCCGAGGGGAACGTTTCTTACAGCGCGAAGGTATGTGTCTT
CGGCAGGATTTTCCCGGAGGGGTTTCCACCGAGGAGAGCCCCTAAATTCA
GGACACACCTGCAAACGCATGTTTACAGGACGGAAATATGACTTACAAGT
AGTATTGGGTGTGGGTTAGGGTTAGAGCTATACTACTTGTAAGTAATTTT
CCCGTCCTGCACAAATGCTATTGCAGGTGCGTCCTGCATTTAGTCGTTCC
CTCCACCGAGGGGTTCCTCAGAGGGGAACAGGGGGGAGATATCGGACGAA
CGGATAGTGAAAAGGATGAATTACGAGGACTGACTCGCAGCGCGAAAACA
AAAAATAAGCCTGTAATTTTTAGGAAGTTAGTTGGGTACGGGATAGGGGG
GGGGGAATGAAGGGGGGCGTGGCCTGCCGTGGCATGTCATGACTCGTGCT
GTAATCCGGGCGAGCGAGAACGGCGACGCTTGGGATCCCGAGTGGGCAAC
CTCTAGTGTGGTGGCTGAAATATCTCTCGTGGCATAGTTCCCGGTAAAAG
TGCGCTGTTTTATTTGGCTTTATATTTTGTCGTGTCCATTGTGCCGGAGA
TTTTATGTGCTACTCGCACGCACGCACGCCTGCGCACACATGTTTTTTTT
TTTATGAGATTGTTTTCTCTTTCTATGCTCTCTCTCTCTCTTTTTACATA
TATATATATATATCTTCTGTCTTCTGAATCGTGTTTTTGGTCTGTTTTTT
TTTGTATCACGTCAGCTTTTCCTCGACGAGCCGGCGGCGAAGATTTACCT
TCTGGACAACTTCGCCTCTGCAGAGGAGTGCTCGTCCCTTACGCGTCAAG
CCTCTCCCCACCTTCAGGTACTGTACTGTATTGGACGTCAAGCCTCCTTA
TTTTATGTCGACACGTTCTATCTTGTATTGGGGGGGGGGGGGGGGGGGGG
GTGGGTCTTTATGAGTAGGCAATTTTTGTTGAGTTTGTGTGGGGTGTTTG
GAATTTTTTTTTTTGTGTTTGTTTTTTTTTTTTTTGGGGGGGGGGGTATG
TGTCTTATTGTTCACACATGTTGGTGTTGTACTGTGTGGGATTACTACAC
CTTTTTTGCATGGTGGGTTTTAATGTTTCACGCAGTCTGGTGTTGTATTG
TGTGGGTTTCATACACCTTGTTTGGATGTTGAATATTATTCTTTACACGT
GCTGATGTTGTATTATGTGGGTTTCCTACACCTTGTGTGGATGTTGAGTT
TAAGTGTTGTGTCGCGCGAAGGGGCAATGTAGTGGGTCGGGCTGGGTGAG
GGGGGGACGGGTAGGCTAAGCTTCATCTACTGACGTTCTCGGGGTTTAGT
GTTGTGTCACACGAAGAGGCAAGATTTTCTTTGGGTGGTTGTGGTTTGAG
GGGGGTGCTTCATCCATTGGCGTTCTCGGCGTGACTAACAATTGAAGCAT
TATTGCCATCCAGAAAAACAGCAGTGGTCCCGGCGGTAGCTGCGGTTTGG
AATCCACCCTTGGATAGCGATATTTCTCCACACCCTTTGATGGATTGGTT
GTTGCTCGCTGCTCGCTGGCCAAGCCGTGTGTGTGTACCCCTTTGATGTC
ATTTCCTGCGTCCTTCGGAGTTGCGCCGCCTGTTTTTTTTCTTTTCTACG
GTGCGAGGAGCAGGGGATAAAGCGATCTCGCTACAGCAGCTAGCTCTAGC
TAGCGTCTCTTGGGTGATCGTGTACGTTTATATCTGTAGCTTCTGGTATC
CGAAGGGCTGTTTGGCATTACTCGCGTAGGAAAATCGACCACAGTCAAAA
TAAGTAAAGCGGATGAGTCAAGGTATGGGGGGGGGGGTGGGTTTTTATGG
ATGTTTGCTTTCTTCTTGCCTCCGCCTCCCCCTCCTCCTCTACCCCCCCC
CCCAACTCGTGGCGCTTTTTTTGACAGGATGCTACGGTCAACGCCGGCGC
CGGCAAGTCGGCGCTTTCCTCGGCGAGAAGGGCCAAGGCGGGAGGCGTGA
ACGCAGACCTCAACAACCCCAAGTCCGTCACCGCTCCGCTGTACCGG
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Coding sequence (CDS) from alignment at H-elongata_contig13142:121..4067-

>mRNA_H-elongata_contig13142.2267.1 ID=mRNA_H-elongata_contig13142.2267.1|Name=mRNA_H-elongata_contig13142.2267.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1500bp|location=Sequence derived from alignment at H-elongata_contig13142:121..4067- (Himanthalia elongata Himel1 dioecious)
CATCGGTGGATTTTGTTTTCATCGCAGCACGTCGACGGGCTGACGGCCTA
CAGCGATGCCATGTGGAACCCAAAGATCATGACCATGTTTACGATGGGCG
AGTTCGACCTCGAGCATCGGTGGATTTTGTTTTCATCGCAGCACGTCGAC
GGGCTGACGGCCTACAGCGATGCCATGTGGAACCCAAAGATCATGACCAT
GTTTACGATGGGCGAGTTCGACCTCGAGGCCATCGTGTCGCGAGACGATG
ACGGTAACCTTAAGATGAGCCTGGAGAGCGCGCTCACGCGGACAGAAGCG
CTGATGGAGGCTGCGTCGGAGACGTGCCGGCGCAGCCCCGAGGTTATCAA
GGCTCTGGCGAGGCGGCGTGGGGTGGCGGCGGCGGAGGGCTCATGCGTCA
TCGGTGCGGCCGGGGACCCTAACGAGATGACCCCGGAGTTCAACGCGTGC
CTGACCCGCGCGGTCGCCGAGGACCTCGCCAAGAAGGAGAAAGAGGCCAA
CAAGAGCATGCGCATGCTGGAGATGGTGGGTGACCGCGCGCGGAACTACA
CGTGCGTCGACCCGGAGATGGAAACCAGCAACACTTCTCTTTCGAGCGTG
ACCTGGAGAGACCCCGAGGGGAACGTTTCTTACAGCGCGAAGGCCATCGT
GTCGCGAGACGATGACGGTAACCTTAAGATGAGCCTGGAGAGCGCGCTCA
CGCGGACAGAAGCGCTGATGGAGGCTGCGTCGGAGACGTGCCGGCGCAGC
CCCGAGGTTATCAAGGCTCTGGCGAGGCGGCGTGGGGTGGCGGCGGCGGA
GGGCTCATGCGTCATCGGTGCGGCCGGGGACCCTAACGAGATGACCCCGG
AGTTCAACGCGTGCCTGACCCGCGCGGTCGCCGAGGACCTCGCCAAGAAG
GAGAAAGAGGCCAACAAGAGCATGCGCATGCTGGAGATGGTGGGTGACCG
CGCGCGGAACTACACGTGCGTCGACCCGGAGATGGAAACCAGCAACACTT
CTCTTTCGAGCGTGACCTGGAGAGACCCCGAGGGGAACGTTTCTTACAGC
GCGAAGCTTTTCCTCGACGAGCCGGCGGCGAAGATTTACCTTCTGGACAA
CTTCGCCTCTGCAGAGGAGTGCTCGTCCCTTACGCGTCAAGCCTCTCCCC
ACCTTCAGCTTTTCCTCGACGAGCCGGCGGCGAAGATTTACCTTCTGGAC
AACTTCGCCTCTGCAGAGGAGTGCTCGTCCCTTACGCGTCAAGCCTCTCC
CCACCTTCAGGATGCTACGGTCAACGCCGGCGCCGGCAAGTCGGCGCTTT
CCTCGGCGAGAAGGGCCAAGGCGGGAGGCGTGAACGCAGACCTCAACAAC
CCCAAGTCCGTCACCGCTCCGCTGTACCGGGATGCTACGGTCAACGCCGG
CGCCGGCAAGTCGGCGCTTTCCTCGGCGAGAAGGGCCAAGGCGGGAGGCG
TGAACGCAGACCTCAACAACCCCAAGTCCGTCACCGCTCCGCTGTACCGG
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