prot_H-elongata_contig13142.2267.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13142.2267.1
Unique Nameprot_H-elongata_contig13142.2267.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length250
Homology
BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A6H5L771_9PHAE (P4Hc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L771_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 3.420e-112
Identity = 171/250 (68.40%), Postives = 204/250 (81.60%), Query Frame = 0
Query:    1 HRWILFSSQHVDGLTAYSDAMWNPKIMTMFTMGEFDLEAIVSRDDDGNLKMSLESALTRTEALMEAASETCRRSPEVIKALARRRGVAAAEGSCVIGAAGDPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNADLNNPKSVTAPLYR 250
            H +++   QH +GLT Y   +WNPKIM MFTMGEFDLE  VSRD +GNL    ESA+TRT  LME AS+ CR+SPEV+KA A+R+G+AAAEGSC I  A   NEM PEF  CLT+A+A+DLAKKE EANKSMRMLE+VGDRARNYTC DP+M+T+N+SL SV W+DPEG ++Y+A++FLD+PAAKIYLLDNFA+ +EC +L   ASPHLQDATVN GAGK+ LS+ARRAKAGGV ADLNN  SVTAPLYR
Sbjct:   74 HSFLVVDDQHAEGLTNYKPELWNPKIMAMFTMGEFDLEVTVSRDANGNLVHVAESAMTRTTRLMETASKECRQSPEVVKATAKRKGLAAAEGSCTIAGAQGENEMVPEFAECLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADPKMDTTNSSLPSVQWKDPEGGLTYNAQVFLDDPAAKIYLLDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSNARRAKAGGVGADLNNKNSVTAPLYR 323          
BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A835YYR1_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR1_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.230e-15
Identity = 60/187 (32.09%), Postives = 99/187 (52.94%), Query Frame = 0
Query:   30 FTMGEFD-LEAIVSRDDDGNLKMSLESALTRTEALMEAASETCRRSPEVIKALARRRGVAAAEGSCVIGAAGD--PNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSL----TRQASPHL 209
            FTM  +D    I S   DG+L++   ++  +  A MEAA+E C+R         +R+   A     ++    +    E+ P+ +    +       +++ E  K  +M+++VGDR RNYTCVDP+M+T+  +L ++TW   + +V      FL+EP +KI L+DNFAS  EC +L    TR  + H+
Sbjct:  103 FTMSPWDDTVTITSNPYDGSLELHQTNSFKKVGASMEAAAEACKRKH-------KRKNAEALLDKELLDCMSNMLATEVAPKASHRCRKLKFIGYFEEDHELAKQRKMMDIVGDRLRNYTCVDPQMKTTEKALRTITWDGRKASV------FLEEPDSKIILVDNFASEAECDALIAAGTRTLTTHI 276          
BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A836CGT5_9STRA (P4Hc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.610e-12
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 0
Query:  125 EKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAG 232
            +KE +K  +M+  VG+R RNYTC+DP+MET+   L +  W        ++ K+FL+E  ++I L+DNF S  EC +L    +  L+ ATV AG  +   S+ARRA AG
Sbjct:  170 DKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKWS------GHAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATV-AGQTQRDKSAARRAMAG 270          
BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A7S2NTX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NTX2_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.450e-11
Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 0
Query:   91 EGSCVIGAAGDPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNA--DLNNPKSVTAPLYR 250
            +GS + G A    ++  E   C+  +VA+ LA+  +E     ++ + + ++  NYTC D E+E+S     SV W +      Y+   FLD   AKI++++NF +AEEC ++   A P L  A+V   +G S  S AR+A   G+    +L +     A L R
Sbjct:  108 QGSNLTGEA--TTKVLDEMAECIEESVAKKLAEANEEVVFQAKIRKEIAEKWENYTCADLEVESSKPKEKSV-WVNRNEYRRYNVGKFLDRDEAKIHVIENFITAEECEAMESAAEPRLHRASVADESGGSKFSEARKAMQAGIKVRWELEHKSDPIAVLSR 266          
BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A7S1CW22_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CW22_CYCTE)

HSP 1 Score: 68.9 bits (167), Expect = 2.920e-10
Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 0
Query:  101 DPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSV--TWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNADLNNP 241
            D  E   E   CL +++ + + + E+E     ++ E++G     YTC D  + T  T    V  +W DP+    +S ++FLD PAAKI+++D+F S  +C    ++A P+L+ A V  G G    S  R+A    + AD++ P
Sbjct:   38 DSKETMDEMMECLEKSMNDKIQEVEEEIAFGNQLREVMGPYFEYYTCHDWRLPTVATGDKVVRESWVDPQTAREHSVRVFLDRPAAKIHMIDDFVSERQCRVAQKEAQPYLRPAKVFDGEGGLTTSGNRKA----LQADVDVP 176          
BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A7R9Z244_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z244_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.090e-8
Identity = 48/182 (26.37%), Postives = 85/182 (46.70%), Query Frame = 0
Query:   74 SPEVIKALARRRGVAAAEGSCVIGAAGDPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNA------DLNNPKSVTAPLY 249
            S EV+ +  +RR   +   +    +A +  +   +  AC+   VA +L +  +E      +   + +   NYTC D E+ T+   +   TW +     +   ++  D P+AK++L+ NF + +EC ++   A P L  ATV  G G S LS +R+A   G+        D N   +V+  +Y
Sbjct:  111 SAEVLLSECQRRAAESISNTKGSVSADEAKKSIEDLVACVEARVAGELERSNEEVAFQASIRTKMAEHLENYTCADEELPTTEP-IQETTWINR--GAARKVQVLHDRPSAKVHLISNFITEDECEAMEDAARPLLHKATVADGKGGSRLSESRKALQAGIKVPWEKEKDGNGIATVSRKVY 289          
BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Match: A0A7S2V3P9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3P9_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 4.670e-5
Identity = 27/77 (35.06%), Postives = 41/77 (53.25%), Query Frame = 0
Query:  138 VGDRARNYTCVDPEMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSSLTRQASPHLQDATV 214
            + +  R   C DP ++T+NT+L + TWR    N  +     LD   AK+Y++ +F S EEC     +A P L  +TV
Sbjct:   44 ISEELRMRICDDPTIDTTNTTLDTRTWRHNAKN--HQVDRLLDREEAKLYVVHDFVSEEECQFFMDKARPWLHPSTV 118          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13142.2267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L771_9PHAE3.420e-11268.40P4Hc domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YYR1_9STRA1.230e-1532.09Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A836CGT5_9STRA1.610e-1241.67P4Hc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2NTX2_9STRA5.450e-1131.48Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1CW22_CYCTE2.920e-1031.47Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7R9Z244_9STRA3.090e-826.37Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2V3P9_9STRA4.670e-535.06Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13142contigH-elongata_contig13142:121..4067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13142.2267.1mRNA_H-elongata_contig13142.2267.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13142 121..4067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13142.2267.1 ID=prot_H-elongata_contig13142.2267.1|Name=mRNA_H-elongata_contig13142.2267.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
HRWILFSSQHVDGLTAYSDAMWNPKIMTMFTMGEFDLEAIVSRDDDGNLK
MSLESALTRTEALMEAASETCRRSPEVIKALARRRGVAAAEGSCVIGAAG
DPNEMTPEFNACLTRAVAEDLAKKEKEANKSMRMLEMVGDRARNYTCVDP
EMETSNTSLSSVTWRDPEGNVSYSAKLFLDEPAAKIYLLDNFASAEECSS
LTRQASPHLQDATVNAGAGKSALSSARRAKAGGVNADLNNPKSVTAPLYR
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