mRNA_H-elongata_contig13107.2249.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: D8LC08_ECTSI (Bardet-Biedl syndrome protein 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC08_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 6.840e-133 Identity = 202/291 (69.42%), Postives = 239/291 (82.13%), Query Frame = 1
Query: 1 EVGDTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLINSQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVCTTYRFEGGATRLRVRARTTEGDYGDVRLTVVANTPPNKSAQVINFCMKPLSLHQRIHKIDRLLE-RPLNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQVQ 870
E GD GR+VG + EN K+LKKE+ +LEKRVA E+KRL G DG S AY P++QHFQAIT+CTLD EQGAY+ISVETPVPLDLVL+++ +HMD LES+D ++ GQ TSL PE+GGGVC TYRFE GATRLR+RARTTEGDYGDVR+TVVA PP KSAQVI+F MKPLSLH R+H + R L+ RP+N+LV RGNFT+QV HDWLAMCLP+VPPR+S E ED+TLNFENVFTGGILTASY+RG ++ SDSASTLAIVKEL+SKEAT+RRV+ITD FQV+
Sbjct: 331 EAGDASGRTVGDVNDENRVKQLKKEVADLEKRVATEKKRLEAAGGGRDGNESSAAYTPATQHFQAITSCTLDPEQGAYVISVETPVPLDLVLLHAAIHMDFLESDDEDDRGQAT-SCVTSLSPENGGGVCATYRFESGATRLRLRARTTEGDYGDVRMTVVAKIPPKKSAQVIHFSMKPLSLHHRVHAMPRNLQARPMNALVLRGNFTMQVIHDWLAMCLPDVPPRISAEAEDATLNFENVFTGGILTASYRRGAAVVSSDSASTLAIVKELISKEATSRRVHITDTFQVE 620
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: A0A835YQP2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQP2_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.480e-49 Identity = 122/356 (34.27%), Postives = 173/356 (48.60%), Query Frame = 1
Query: 1 EVGDTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTD---DGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLIN-------------SQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVC--------------------TTYRFEGGATRLR-------VRARTTEGDYGDVRLTVVANTP--------------PNKSAQVINFCMKPLSLHQRIHKIDRLLER-----------PLNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQ 864
+ GD GR+VG + TEN ++L+KE+ EL+++VA ER++ + G+ A P Q FQA+ C LDA+ AY ++VE PVP+D+VL+ S +H+D L+ +D + Q T P G Y + G RL +R RTTEGD GDV LTVVA K+AQV+ F ++PLSLH R+H E+ P+N L G FT+ V HDW+A CLP VPP +T + L F N FTG +LT Y++G + RSDSAS LAI++E A RR++++ ++Q
Sbjct: 436 DAGDEGGRTVGVVQTENRVRQLQKEVQELQRKVAAEREKALSAAKLSAAKGGEGGGPALMPHVQPFQALATCALDADAAAYRMNVEIPVPIDVVLLQXXXXXXXXXXXXXSSIHLDFLDVSDES----QASAVCTVCAPAAGNAAALMAVYSXXXXXXXXXXXXXXAAYCRQEGTRRLMEXXXXLMIRVRTTEGDSGDVSLTVVARPEGGXXXXXXEAQGAISRKNAQVVKFKIRPLSLHHRVHAERGQEEKWPEPGEEAPGPPMNELRLTGGFTLGVVHDWVAQCLPGVPPEAQSDTMN--LKFRNAFTGSVLTCRYRKGEAVARSDSASALAILREAFETGAIQRRIHLSHNYQ 785
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: A0A067CXS2_SAPPC (Uncharacterized protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CXS2_SAPPC) HSP 1 Score: 182 bits (463), Expect = 4.830e-49 Identity = 105/293 (35.84%), Postives = 165/293 (56.31%), Query Frame = 1
Query: 1 EVGDTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLINSQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVCTTYRFEGGATRLRVRARTTEGDYGDVRLTVVANTPPNKSAQVINFCMKPLSLHQRIHKID--RLLERPLNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQVQP 873
+ D +GRS G + E +L+KEI +LE++VA ER R+ ++ A P + C L+ + Y +S+E PVP+ V+++S V +DLL++ V Q + + P V TYR + RL R RT EG YG++ LTV+A+T P + AQ++ +KPLSLH RI+ ++ L E +NSL G+F++ H+W++ CLPEVP R+ D+ D + F N F +L Y++G S S ST+AI+KE+++KEATAR++ + F ++P
Sbjct: 331 DADDVYGRSRGTVQRETRIVKLRKEIAQLEEKVAKERDRVARKSASE-----KEACLPVVEEVPVNCKCALNVAEQTYDLSIELPVPIATVVLHSSVPLDLLDT-----VNNQAILCRSPPDPSTNSHVLATYRCQEFTNRLEFRVRTLEGQYGEIELTVLADTVP-RCAQIVKQFIKPLSLHHRINVVESTELDEATMNSLHLTGDFSLLQVHEWVSYCLPEVPLRLQDD--DVKMYFRNTFFSNVLVCEYRKGEAQFASSSISTIAILKEVITKEATARKIGLDISFDIKP 610
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: A0A7S1C5K1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5K1_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.350e-48 Identity = 107/288 (37.15%), Postives = 171/288 (59.38%), Query Frame = 1
Query: 10 DTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLINSQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVCTTYRFEGGATRLRVRARTTEGDYGDVRLTVVANTPPNKSAQVINFCMKPLSLHQRIH-KIDRLLERPLNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQVQ 870
D++GRS + E + ++KE+ EL ++V ER++ + + P Q F+ TLDA++ AY +++E P+P+D+V + SQV +DLL+ D N+ + S T ++G + TYR + RL + RT EG +G+++ V+A P K+AQ++ +KPLSLH R+H ID RP+N L G FT+ H+W+A CLP+VP RV ++ + + F NVF G L+ASYK+G + SDS ST+AI+KE+++K ATAR+V + F+++
Sbjct: 338 DSYGRSKNTVQREGRIRVMRKELDELRRKVEKEREKYAKV---------ADEFIPVEQQFKVKEAFTLDADEAAYKLNLEIPMPIDVVALQSQVPVDLLDV-DTND----AIVSRTPPDRDNGNALLATYRCQESMNRLTITLRTVEGQFGELQAMVIAKMAP-KTAQIVRLQIKPLSLHHRLHGDIDG---RPMNRLRLAGAFTLGQMHEWVANCLPDVPSRVMED--EVRMVFRNVFLGTQLSASYKKGEAVFLSDSISTIAILKEVITKAATARKVRVELSFEIK 605
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: A0A1W0A0Q1_9STRA (BBS2_Mid domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0Q1_9STRA) HSP 1 Score: 177 bits (448), Expect = 5.890e-47 Identity = 105/293 (35.84%), Postives = 163/293 (55.63%), Query Frame = 1
Query: 1 EVGDTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLINSQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVCTTYRFEGGATRLRVRARTTEGDYGDVRLTVVANTPPNKSAQVINFCMKPLSLHQRIHKIDRLLERP--LNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQVQP 873
+ D +GRS G + E +L+KEI++LE++V ER R G A P + CTL+ + Y + VE PVP+ V+++S V +DLL++ + Q + + P + V TYR + RL R RT EG YG++ L V+A+ P + AQV+ +KPLSLH RI+ +D P LN+L F G+F + H+W+ CLP+VP R+ DE D + F N F G IL Y++G + + S ST+AI+KE+++KEAT+R++ + +F ++P
Sbjct: 328 DTDDVYGRSRGTVQRETRIVKLRKEIVQLEEKVNKERDRSAKKG------ASEKECLPVVEEIPVNCKCTLNPTEQTYDLFVEIPVPIASVVLHSSVPLDLLDTKN-----NQAILCRSPPDPVNNSHVLATYRCQDFTNRLEFRIRTLEGQYGEIELIVLADMVP-RCAQVVKQFIKPLSLHNRINVVDSTEIDPSVLNTLHFTGDFALIQVHEWVRYCLPDVPVRLQDE--DVKMYFRNTFFGNILVCEYRKGEALFSTSSISTIAILKEVITKEATSRKIGLDINFDIKP 606
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: K3WA10_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA10_GLOUD) HSP 1 Score: 176 bits (447), Expect = 8.490e-47 Identity = 106/291 (36.43%), Postives = 165/291 (56.70%), Query Frame = 1
Query: 1 EVGDTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLINSQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVCTTYRFEGGATRLRVRARTTEGDYGDVRLTVVANTPPNKSAQVINFCMKPLSLHQRIHKIDR-LLERPLNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQVQ 870
+ D++GRS G + E +L+KEI LE+++ E+ R +++ Y P ++ L+ GAY +S+E PV + V+++S V +DLLE NE ++ S + P + TYR RL RT EG YG+V +TV+ +T P K+AQ + F +KPLSLH R++++D L+ P N+L F G FT+ HDW++MCLPEVP R+ DE + T+ ++N F G +L Y++G S S S +AI+KE+++KEATAR+V + V+
Sbjct: 336 DADDSYGRSRGTVHRETRIVKLRKEISLLEEKIIKEKDR--------SLRSREKEYLPVAEDLVVNHKFQLNPSLGAYDVSIEIPVSIQAVVLHSAVPIDLLE----NEKNHAIV-SKSPPDPANNTHFLATYRCLEQTHRLEFSIRTIEGQYGNVEVTVITDTQP-KAAQCVKFYVKPLSLHHRVNEVDESALKMPTNTLQFSGPFTLVQIHDWVSMCLPEVPGRLQDE--EVTMYYKNTFLGNLLLCRYRKGEATFSSPSVSVIAILKEMITKEATARKVTLNMSLDVK 610
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: A0A485KX81_9STRA (Aste57867_12931 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KX81_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.030e-46 Identity = 107/292 (36.64%), Postives = 158/292 (54.11%), Query Frame = 1
Query: 1 EVGDTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLINSQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVCTTYRFEGGATRLRVRARTTEGDYGDVRLTVVANTPPNKSAQVINFCMKPLSLHQRIHKID--RLLERPLNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQVQ 870
+V DT+GRS G + E +L+KEI LE++V E+ D K P + L+ E Y I+VE PVP+ V I+S V +DLL++ Q + + P + V TYR + RL R RT EG +GDV LTV+A T P KSAQ + +KPLSLH R++ ++ L E +NSL F G F++ H+W+ CLP+VP R+ D+ + L F N F G +L Y++G S S ST+AI+KE+++KEAT R++ + +F ++
Sbjct: 321 DVDDTYGRSRGTVQRETRIVKLRKEIAALEEKVLREK---------DKTNRKGDEVLPVVEEVPVNCQYALNPENQTYDIAVEIPVPIACVCIHSSVPLDLLDTTK-----NQAILCRSPADPANNTHVLATYRCQELTNRLEFRIRTLEGQFGDVELTVLAETVP-KSAQCVKVTVKPLSLHHRVNVVESSELDEDTMNSLHFTGAFSLIQVHEWICFCLPDVPVRMQDD--EGKLYFRNTFVGNLLVCEYRKGEARFFSSSVSTIAILKEVITKEATTRKITLNMNFDIK 595
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: A0A024U9Y1_9STRA (BBS2_Mid domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9Y1_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.440e-46 Identity = 107/289 (37.02%), Postives = 156/289 (53.98%), Query Frame = 1
Query: 10 DTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLINSQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVCTTYRFEGGATRLRVRARTTEGDYGDVRLTVVANTPPNKSAQVINFCMKPLSLHQRIHKIDR--LLERPLNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQVQ 870
D++GRS G + E +L+KEI LE++V E+ D K P + C L+ E Y I VE PVP+ V ++S V +DLL++ Q + + P + V TYR + RL R RT EG YG+V LTV+A T P KSAQ + +KPLSLH R++ +D + E +NSL F G F++ H+W+A CLP+VP R+ D+ + L F N F G +L Y++G S S ST+AI+KE+++KEAT R+V + F ++
Sbjct: 325 DSYGRSRGTVQRETRIVKLRKEIAVLEEKVMKEK---------DRSTRKGDECLPVVEEVPVNCQCVLNPENQTYDIGVEIPVPIACVSLHSTVPLDLLDT-----AKNQAILCRSPADPANHTHVLATYRCQELTNRLEFRIRTLEGQYGEVELTVLAETVP-KSAQCVKIVVKPLSLHHRVNVVDSKDVDEAVMNSLYFTGAFSLVQVHEWVAFCLPDVPVRMQDD--EGKLYFRNAFVGNVLVCEYRKGEARFLSSSVSTIAILKEVITKEATIRKVTLNMTFDIK 596
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: A0A421GMA2_9STRA (Cupin_8 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GMA2_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.860e-46 Identity = 104/291 (35.74%), Postives = 164/291 (56.36%), Query Frame = 1
Query: 10 DTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLINSQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVCTTYRFEGGATRLRVRARTTEGDYGDVRLTVVANTPPNKSAQVINFCMKPLSLHQRIHKIDRLLE----RPLNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQVQ 870
DT+GRS G + E +L+KE+ LE ++A + G AK Y P ++ + L+A GAY +S+E PV + +++++S V +DLLE NE ++ S + + P +G TYR RL + RT EG +G V TVVANT P +SAQ + F +KPLSLH R++++ E +P N+L G+F++ HDW++MCLPEVP R+ ++++ TL + N F G +L Y +G + S S +AI+KE+++KEATAR+ + ++
Sbjct: 648 DTYGRSRGTVQRETRIVKLRKEVTALEDKIARMSLQRG---------AKEKEYLPVAEDLVVNSKFQLNAALGAYDVSLEIPVSIQMIVLHSAVPLDLLE----NESNLAIV-SKSPVDPTNGTHFLATYRCLEPTHRLEFQVRTIEGQFGHVEATVVANTQP-RSAQTVKFFVKPLSLHHRVNELSEAEEAEFQKPCNTLQLSGDFSLVQIHDWVSMCLPEVPGRL--QSDEVTLRYRNTFVGSLLVCRYSKGEASFSTPSVSAIAILKEIITKEATARKATLNISLDIK 921
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Match: W4FKY5_9STRA (BBS2_Mid domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FKY5_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.000e-45 Identity = 107/292 (36.64%), Postives = 159/292 (54.45%), Query Frame = 1
Query: 1 EVGDTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQAKSTAYAPSSQHFQAITNCTLDAEQGAYLISVETPVPLDLVLINSQVHMDLLESNDPNEVGQQVMGSTTSLGPEDGGGVCTTYRFEGGATRLRVRARTTEGDYGDVRLTVVANTPPNKSAQVINFCMKPLSLHQRIHKIDR--LLERPLNSLVFRGNFTIQVAHDWLAMCLPEVPPRVSDETEDSTLNFENVFTGGILTASYKRGTVMLRSDSASTLAIVKELVSKEATARRVNITDDFQVQ 870
++ D++GRS G + E +L+KEI LE++V E+++ K P + C L+ + Y I+VE PVP+ V ++S V +DLL++ V Q + P V TYR + RL R RT EG YGDV LTV+A T P K+AQ + +KPLSLH R++ +D + E +NSL F G F++ H+W++ CLP+VP R+ D+ + L F N F G IL YK+G S S S +AI+KE+++KEATAR+V + F ++
Sbjct: 322 DMEDSYGRSRGTVQRETRIVKLRKEIAILEEKVLKEKEK---------SSRKGDECLPVVEEVPVNCQCVLNPDNQTYDIAVEIPVPIACVSLHSSVPLDLLDT-----VKNQAI---LCRSPTTNSHVLATYRCQELTNRLEFRIRTLEGQYGDVELTVLAETVP-KAAQCVKVVVKPLSLHHRVNVVDSADVDESVMNSLHFTGAFSLIQVHEWVSFCLPDVPVRMQDD--EGKLFFRNTFVGNILVCEYKKGEARFLSSSVSAIAILKEVITKEATARKVTLNMTFDIK 593 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13107.2249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13107.2249.1 >prot_H-elongata_contig13107.2249.1 ID=prot_H-elongata_contig13107.2249.1|Name=mRNA_H-elongata_contig13107.2249.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=291bp EVGDTFGRSVGAIITENHAKRLKKEILELEKRVAIERKRLGGTGRTDDGQback to top mRNA from alignment at H-elongata_contig13107:5456..7743- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13107.2249.1 ID=mRNA_H-elongata_contig13107.2249.1|Name=mRNA_H-elongata_contig13107.2249.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2288bp|location=Sequence derived from alignment at H-elongata_contig13107:5456..7743- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13107:5456..7743- >mRNA_H-elongata_contig13107.2249.1 ID=mRNA_H-elongata_contig13107.2249.1|Name=mRNA_H-elongata_contig13107.2249.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1746bp|location=Sequence derived from alignment at H-elongata_contig13107:5456..7743- (Himanthalia elongata Himel1 dioecious)back to top |