prot_H-elongata_contig12872.2116.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12872.2116.1 vs. uniprot
Match: D8LK34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK34_ECTSI) HSP 1 Score: 243 bits (619), Expect = 2.120e-69 Identity = 173/353 (49.01%), Postives = 207/353 (58.64%), Query Frame = 0
Query: 2 SQQLNVSLVRILKIEAQSNI--RSRFGGDSYDASSSPV-----TVERPSALHHHHETPPAVLVSVLVSVLHCPLHMGCFLQCPPNPCPSGGCP--------DQDERQR-CPAFSLASPACAATFPLRRCDVKGVGGAGAALLAAAAAVKGKGGVVGEEGISEGRISAEEVPRDERLRYRLLAHVLAEVLWEQLLLDTSGGGGVFTLGDTSRLIGTTLVAAAEEMKRNFISKAERSGV--------AFSGGGGGTGLE-----RRQEAAVVLVDRTLDLAAACSRGGSLLQRILSSLFRTGTVPNAATSSPSFA-----DWSPTASAHQQDVGVTLPALTPGLGVPAPARVPAR 320
SQQL VSL R+LKI+AQS+ R RF S ++ T+ +A H AV +VLV++ H PLH+GCF Q GG Q + Q+ C AFSLASPACA FPLRRCD +G + G +SAEEVPR ERLRYRLLAH L E LW+QLLLD SGGGGVFTLGDTSRLIGTT+ A AE++KR + + G A SG GGG G + R+EA+VVL+DR LD+AAA S GGSLLQRILSS+ RTGT +A ++PS DWSP+A+AHQQDVGV LP LTPGLG+PA A R
Sbjct: 143 SQQLKVSLERMLKIKAQSSSSGRRRFSKPSPSSTXXXXXXXTQTIATEAAPHLAAN---AVDPTVLVTIKHSPLHVGCFFQASTTITSGGGSSVDVDQPLDSQGQHQKGCSAFSLASPACARVFPLRRCDWEGXXXXXXXXXXXXXXXXXXX-XXXXXXETRGHVSAEEVPRGERLRYRLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERPAPPGFGGEGGADSASSGRGGGFGSDGAGPAARREASVVLIDRNLDVAAAASHGGSLLQRILSSIDRTGTPNSAVPATPSSPEAVAIDWSPSAAAHQQDVGVVLPMLTPGLGLPARAAAVER 491
BLAST of mRNA_H-elongata_contig12872.2116.1 vs. uniprot
Match: A0A6A3JAG4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JAG4_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.960e-5 Identity = 73/218 (33.49%), Postives = 93/218 (42.66%), Query Frame = 0
Query: 61 VSVLHCPLHMGCFLQCP-PNPCPSGGCPDQDERQRCPAFSLASPACAATFPLRRCDVKGVGGAGAALLAAAAAVKGKGGVVGEEGISEGR----ISAEEVPRDERLRYRLLAHVLAEVLWEQLLLDTSGGGGVFTLGDTSRLIGTTLVAAAEEMKRNFISKAERSGVAFSGGGGGTGLERRQEAAVVLVDRTLDLAAACSRGGSLLQRILSSLFRTGT 273
V VLH PL++ L P P PS F L+ CAA FPL V+ AAA+ EG+++ + + +P R RLLA+ LAEV L D +F LG TS IG TL+ EM+ L+ RQ AA+V+VDRT DLA CS G SLL RIL+ L +T T
Sbjct: 182 VQVLHLPLNVVPLLSNKTPTPEPS-------------VFVLSHATCAAAFPLLLHQVED---------AAASPTSPTNRGTATEGLNKYKNVRDVLPVHIPSAFRRAMRLLAYTLAEVTLGARL-DVKER--IFALGATSLKIGHTLLRILNEMQEEET------------------LQGRQGAALVIVDRTSDLATPCSFGSSLLDRILALLPQTPT 356 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12872.2116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig12872.2116.1 ID=prot_H-elongata_contig12872.2116.1|Name=mRNA_H-elongata_contig12872.2116.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=336bpback to top |