mRNA_H-elongata_contig12872.2116.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12872.2116.1
Unique NamemRNA_H-elongata_contig12872.2116.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12872.2116.1 vs. uniprot
Match: D8LK34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK34_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 8.390e-105
Identity = 231/436 (52.98%), Postives = 272/436 (62.39%), Query Frame = 1 
Query:    4 AFAQGRDRAERAPGSENITRGIFLVTSFVWDVEGAILNAAKSYGLTEASVTVACSVSEEAHVCHPHAAHISEETAGRVSFADMSQQLNVSLVRILKIEAQSNI--RSRFGGDSYDASSSPV-----TVERPSALHHHHETPPAVLVSVLVSVLHCPLHMGCFLQCPPNPCPSGGCP--------DQDERQR-CPAFSLASPACAATFPLRRCDVKGVGGAGAALLAAAAAVKGKGGVVGEEGISEGRISAEEVPRDERLRYRLLAHVLAEVLWEQLLLDTSGGGGVFTLGDTSRLIGTTLVAAAEEMKRNFISKAERSGV--------AFSGGGGGTGLE-----RRQEAAVVLVDRTLDLAAACSRGGSLLQRILSSLFRTGTVPNAATSSPSFA-----DWSPTASAHQQDVGVTLPALTPGLGVPAPARVPAR 1209
            AFA GR      P SE +TRGIFLVT+FVWDVEGA+L+AA +YGLTE  V +ACSVSEEAH CH HAAHISEET GR SFA +SQQL VSL R+LKI+AQS+   R RF   S  ++         T+   +A H       AV  +VLV++ H PLH+GCF Q        GG           Q + Q+ C AFSLASPACA  FPLRRCD +G                           + G +SAEEVPR ERLRYRLLAH L E LW+QLLLD SGGGGVFTLGDTSRLIGTT+ A AE++KR  + +    G         A SG GGG G +      R+EA+VVL+DR LD+AAA S GGSLLQRILSS+ RTGT  +A  ++PS       DWSP+A+AHQQDVGV LP LTPGLG+PA A    R
Sbjct:   63 AFAPGRS-PPAVPESEGLTRGIFLVTNFVWDVEGAVLHAACTYGLTE--VALACSVSEEAHACHSHAAHISEETGGRASFAVVSQQLKVSLERMLKIKAQSSSSGRRRFSKPSPSSTXXXXXXXTQTIATEAAPHLAAN---AVDPTVLVTIKHSPLHVGCFFQASTTITSGGGSSVDVDQPLDSQGQHQKGCSAFSLASPACARVFPLRRCDWEGXXXXXXXXXXXXXXXXXXX-XXXXXXETRGHVSAEEVPRGERLRYRLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERPAPPGFGGEGGADSASSGRGGGFGSDGAGPAARREASVVLIDRNLDVAAAASHGGSLLQRILSSIDRTGTPNSAVPATPSSPEAVAIDWSPSAAAHQQDVGVVLPMLTPGLGLPARAAAVER 491
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BLAST of mRNA_H-elongata_contig12872.2116.1 vs. uniprot
Match: A0A6A3JAG4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JAG4_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.420e-7
Identity = 103/346 (29.77%), Postives = 138/346 (39.88%), Query Frame = 1 
Query:   46 SENITRGIFLVTSFVWDVEGAILNAAKSYGLTEASVTVACSVSEEAHVCHPHAAHISEETAGRVSFADMSQQLNVSLVRILKIEAQSNIRSRFGGDSYDASSSPVTVERPSALHHHHETPPAVLVSVLVSVLHCPLHMGCFLQCP-PNPCPSGGCPDQDERQRCPAFSLASPACAATFPLRRCDVKGVGGAGAALLAAAAAVKGKGGVVGEEGISEGR----ISAEEVPRDERLRYRLLAHVLAEVLWEQLLLDTSGGGGVFTLGDTSRLIGTTLVAAAEEMKRNFISKAERSGVAFSGGGGGTGLERRQEAAVVLVDRTLDLAAACSRGGSLLQRILSSLFRTGT 1068
            +E++   + L++ F+WD E A L    + G+    VTV  S+SE AH C+            R   A   +     L + L    Q+  +S    D  DA      VER                   V VLH PL++   L    P P PS              F L+   CAA FPL    V+          AAA+           EG+++ +    +    +P   R   RLLA+ LAEV     L D      +F LG TS  IG TL+    EM+                      L+ RQ AA+V+VDRT DLA  CS G SLL RIL+ L +T T
Sbjct:   79 NESVGHLVLLLSGFLWDYEAA-LTRLLALGVAR-RVTVCSSLSERAHECYDFGGG-GGAAGARAPNAMKFEAFAAELGKKLVTPTQNGPKSEEEWDWDDAD-----VERSG-----------------VQVLHLPLNVVPLLSNKTPTPEPS-------------VFVLSHATCAAAFPLLLHQVED---------AAASPTSPTNRGTATEGLNKYKNVRDVLPVHIPSAFRRAMRLLAYTLAEVTLGARL-DVKER--IFALGATSLKIGHTLLRILNEMQEEET------------------LQGRQGAALVIVDRTSDLATPCSFGSSLLDRILALLPQTPT 356
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12872.2116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK34_ECTSI8.390e-10552.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6A3JAG4_9STRA1.420e-729.77Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12872contigH-elongata_contig12872:2104..8268 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score67.0
Seed ortholog evalue1.9e-08
Seed eggNOG ortholog67593.Physo141033
EggNOG OGs29NWQ@1,2RRWC@2759,3QCHF@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-06_008010.1
Exons10
Model size1876
Cds size1008
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12872.2116.1prot_H-elongata_contig12872.2116.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12872 2639..6053 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929765.7576346-UTR-H-elongata_contig12872:2103..22531622929765.7576346-UTR-H-elongata_contig12872:2103..2253Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 2104..2253 +
1691679149.2261314-UTR-H-elongata_contig12872:2103..22531691679149.2261314-UTR-H-elongata_contig12872:2103..2253Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 2104..2253 +
1622929765.7762644-UTR-H-elongata_contig12872:2539..26381622929765.7762644-UTR-H-elongata_contig12872:2539..2638Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 2540..2638 +
1691679149.2363176-UTR-H-elongata_contig12872:2539..26381691679149.2363176-UTR-H-elongata_contig12872:2539..2638Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 2540..2638 +
1622929765.8892415-UTR-H-elongata_contig12872:6053..62241622929765.8892415-UTR-H-elongata_contig12872:6053..6224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 6054..6224 +
1691679149.3024683-UTR-H-elongata_contig12872:6053..62241691679149.3024683-UTR-H-elongata_contig12872:6053..6224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 6054..6224 +
1622929765.8996418-UTR-H-elongata_contig12872:6943..70711622929765.8996418-UTR-H-elongata_contig12872:6943..7071Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 6944..7071 +
1691679149.3107624-UTR-H-elongata_contig12872:6943..70711691679149.3107624-UTR-H-elongata_contig12872:6943..7071Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 6944..7071 +
1622929765.9147308-UTR-H-elongata_contig12872:7487..76201622929765.9147308-UTR-H-elongata_contig12872:7487..7620Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 7488..7620 +
1691679149.319978-UTR-H-elongata_contig12872:7487..76201691679149.319978-UTR-H-elongata_contig12872:7487..7620Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 7488..7620 +
1622929765.9315639-UTR-H-elongata_contig12872:8081..82681622929765.9315639-UTR-H-elongata_contig12872:8081..8268Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 8082..8268 +
1691679149.3301744-UTR-H-elongata_contig12872:8081..82681691679149.3301744-UTR-H-elongata_contig12872:8081..8268Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12872 8082..8268 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929765.7909582-CDS-H-elongata_contig12872:2638..26561622929765.7909582-CDS-H-elongata_contig12872:2638..2656Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 2639..2656 +
1691679149.2448275-CDS-H-elongata_contig12872:2638..26561691679149.2448275-CDS-H-elongata_contig12872:2638..2656Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 2639..2656 +
1622929765.8080215-CDS-H-elongata_contig12872:3174..36471622929765.8080215-CDS-H-elongata_contig12872:3174..3647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 3175..3647 +
1691679149.2531703-CDS-H-elongata_contig12872:3174..36471691679149.2531703-CDS-H-elongata_contig12872:3174..3647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 3175..3647 +
1622929765.8265476-CDS-H-elongata_contig12872:4327..44511622929765.8265476-CDS-H-elongata_contig12872:4327..4451Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 4328..4451 +
1691679149.2706761-CDS-H-elongata_contig12872:4327..44511691679149.2706761-CDS-H-elongata_contig12872:4327..4451Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 4328..4451 +
1622929765.845851-CDS-H-elongata_contig12872:5152..53261622929765.845851-CDS-H-elongata_contig12872:5152..5326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 5153..5326 +
1691679149.2805097-CDS-H-elongata_contig12872:5152..53261691679149.2805097-CDS-H-elongata_contig12872:5152..5326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 5153..5326 +
1622929765.8599834-CDS-H-elongata_contig12872:5781..59561622929765.8599834-CDS-H-elongata_contig12872:5781..5956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 5782..5956 +
1691679149.2875671-CDS-H-elongata_contig12872:5781..59561691679149.2875671-CDS-H-elongata_contig12872:5781..5956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 5782..5956 +
1622929765.878722-CDS-H-elongata_contig12872:6009..60531622929765.878722-CDS-H-elongata_contig12872:6009..6053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 6010..6053 +
1691679149.294855-CDS-H-elongata_contig12872:6009..60531691679149.294855-CDS-H-elongata_contig12872:6009..6053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12872 6010..6053 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12872.2116.1

>prot_H-elongata_contig12872.2116.1 ID=prot_H-elongata_contig12872.2116.1|Name=mRNA_H-elongata_contig12872.2116.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=336bp
MSQQLNVSLVRILKIEAQSNIRSRFGGDSYDASSSPVTVERPSALHHHHE
TPPAVLVSVLVSVLHCPLHMGCFLQCPPNPCPSGGCPDQDERQRCPAFSL
ASPACAATFPLRRCDVKGVGGAGAALLAAAAAVKGKGGVVGEEGISEGRI
SAEEVPRDERLRYRLLAHVLAEVLWEQLLLDTSGGGGVFTLGDTSRLIGT
TLVAAAEEMKRNFISKAERSGVAFSGGGGGTGLERRQEAAVVLVDRTLDL
AAACSRGGSLLQRILSSLFRTGTVPNAATSSPSFADWSPTASAHQQDVGV
TLPALTPGLGVPAPARVPARDCGGSGTRGGCGRGG*
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mRNA from alignment at H-elongata_contig12872:2104..8268+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12872.2116.1 ID=mRNA_H-elongata_contig12872.2116.1|Name=mRNA_H-elongata_contig12872.2116.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6165bp|location=Sequence derived from alignment at H-elongata_contig12872:2104..8268+ (Himanthalia elongata Himel1 dioecious)
AAGGCATTTGCGCAAGGGAGAGACCGCGCCGAGAGAGCCCCCGGGTCTGA
AAACATTACGCGGGGCATCTTCCTGGTGACGTCATTCGTATGGGACGTTG
AAGGCGCTATCCTGAACGCGGCCAAAAGCTACGGCCTCACCGAGGCAAGC
GTCATAAAACCCCTCTGCTCATCTCCCCGTCCTCAAATCGATTGTGTACC
CCTGAACGCTAATGACATATATATTCCGAGCACTTGAGATACTGTTCCTC
GCATGGATGTAGACGCGATACCGTTACCTGTATGGTGGCTAGATGGCCGT
AACCAACCAACCACAACGCGTCTTTTAAGAGGTCGCACACACGAGGTATA
GGTTATAACTTTAGCTGTCTAGCTCTATGGGAGAAGGAATGCTGAGCGTG
TTCCCCTCGCCCCTTCCGACCCACGGACGCGTGCAGGTGACCGTCGCGTG
CTCGGTGTCCGAGGAGGCGCATGTCTGCCATCCGCACGCCGCGCACATCT
CGGAGGAGACGGCTGGCCGAGTCTCTTTTGCCGACATGTCTCAGCAGCTC
AACGTGAGGGACTCGATGCAGACGCCACACTTGGCTGTCTACACAGGAGC
AGCGTACGAGCGTCACGCGAGGTTGCGAGATAGTCCCCGCCTCGAGTACT
CCTCCGAATGGAAGCTTGCTTTTCGTAGAGGAAGGAATTGCGGTGGTGGT
CCGTTTGTTTTGTACTGCATTGTGTATAGGGAGAGCAAAGAAAAGCGAAG
GACTTTAGAGCCATGTTGTATCTAGTACATAGTATGGGTCTAGTACATAG
TATCGACGCTTGACGGGGATGGAAAACACTAATGGTTCGTACCGTAGCTA
TAGCTGTAGTATGAAGCAATATATTCGAGTATCGCAAGAGTAGCATAAAT
TAAAAAACAGTGCGCTGCTTGAGGTGTCCAGTAGAGTAATTTGGGCCGAC
CCCTTGGAAAGGTTTTCGAGTTCACTGTGCCCAAGGGCCAGGCCAGCTCC
ACGGCGCGCCCGACCAATAATCACCATATCACCACCAATCATCGCTCCGC
CCCTTTTTTTTTCCCGAACAGGTTAGCCTAGTGAGAATACTCAAGATCGA
GGCACAAAGCAACATCAGGTCTCGCTTCGGGGGAGACTCGTATGATGCGT
CATCTTCTCCCGTCACGGTTGAACGCCCTTCAGCGCTCCATCACCATCAC
GAGACTCCGCCCGCCGTCCTCGTGAGCGTCCTCGTGAGCGTCCTCCACTG
CCCGCTGCACATGGGATGTTTCCTTCAATGTCCTCCGAATCCTTGCCCCT
CGGGTGGCTGTCCCGACCAAGATGAGCGGCAGCGATGCCCGGCCTTCTCC
CTGGCGAGCCCCGCGTGCGCCGCGACCTTCCCTTTGCGACGTTGCGATGT
AAAAGGCGTTGGTGGGGCTGGCGCCGCGCTCTTGGCTGCGGCCGCTGCGG
TGAAGGGGAAGGGAGGGGTGGTAGGGGAAGAGGGTATCTCGGAGGGGCGT
ATTTCGGCCGAGGAAGTGCCCAGAGACGAGCGATTGCGGTACAGGTGATA
GGTGCTGGGAATGGGGAAAGCTGGCTTGCTAGGCTTGACTGTACCTGCCT
TCCGGCCTAACTAACTATTATAGTAACTATTATAGTAACTGATGCTTACC
TTCGTTACGGGCGCTGGTGTCGATTCAGTGTTGCGGCGGGCTCTGAAATT
GGCTTGTTTCGGAATCTTAAAACAAATAAATAACTTTGTGAACAGAAGAT
ATCGAAAAATAAAGTTCCGCGGAAAAAGGGAAAAAATACTGTCGTTCGCG
GTTTGGTCTCACCAAGCGAGCATCTCTCTGATATCGGTCTAATCCTCTGG
CGTCATCCTCCGATGTCGTCCAAACTGTCGATTTCTCCAGTATTGGGTGT
CGCTTTGGTGACGTCACCAGGAGGCTAGAAGGACCGAACGGTGAAACGTT
GTGCGGAAACATCCAGAGCCATATCTCTCTAAGCATGCCACGCCGGCAAA
GACCTAGGCGACCCCGTCCCGACCCTCGACATTCTAGCCTCCACGATCAA
AGAACTCATAGTGAAGGGCTCATAGTCCTATATTTGAAAAATCTTCGTGT
ATGCCTTTAAGCATACATTATTGATTATCGATAGAACTGCATCTCCTTCG
GTGAGAGATCGAATATTTGCCCCATTATCAGCGGAATATGTCTTTGTGTG
TGTCGGGGGGGGTGGAGCGAACAGACTCCTAGCCCACGTCCTGGCCGAGG
TGCTGTGGGAGCAGCTCCTTTTGGATACCAGCGGTGGTGGCGGAGTGTTC
ACCCTCGGAGACACCTCTCGTCTTATCGGCACTACTCTAGTCGCAGCGGT
ACGCACCCTTACCCTTTGGTTGAGCTACTATTATAGTATATATATATTAA
CAGAGCTACTCTTAGAGCTACAGCTAGATCTACGGATGCCTAGCTAATCT
AAATAGGGATGTCACGGATCGCGGGGGTAGGGTGTGATGTCCTGGATTCG
GTGTTCGACCAACACCCTACGAGCCCGGATCGGGGTCTCGACGTACTGTA
CACGCCGTGAGCGGCCTTGAAAGGTAATACGGTAATACGGTTGCGTATCT
TCTTCTTAGTAGCGTGGTATTTTTTTCCTATTAGCGAGGCGAAATCAAAG
TGCCCGCATTGTCGCATTATCGTATCGGCAGCGCACTGAACCGCGCATCG
GGAGTGCTTTCCGCCTGGAGGCAGCGCTGCGTGTATTTCTAGCGCCAAAA
AATACAAGTCAATTGCTGTCGAATGGACGTGATCGCATTGAGTGACCTGA
GTCCCCAGGGTGCGCCAAGCCTGGTGCTCGACCAGGAAGACCCCCTCCTA
TCCACTATCTGGGACAAGCTGAGCGCTTGCCTAGTTAACACTTGGTACTA
CTTGAGACCGATATACCGATATTCGCTGCCCCGATTCAGTACGACCCACA
ATCCTTGAGAGCGACGAACACCTTCTGCGTTACAAAAAAAAACTCGTGCC
TTTCGATGCGCAAGCCATACTCGTGTCGCGTGGGATCCTGCACTCGCAGG
CTGAAGAGATGAAGAGGAATTTCATCTCCAAAGCCGAGCGGAGCGGGGTG
GCGTTTTCGGGAGGGGGCGGTGGCACAGGATTGGAGAGACGCCAAGAAGC
GGCGGTGGTTTTGGTCGATCGTACCTTGGATCTAGCGGCGGCATGTTCAC
GCGGTGGAAGCCTGCTCCAGAGGGTAAGACAGACGCCTAACAAGTTAAGT
GACATGACCTCTGGCATATGCTGAGGCTGTCGGAATGAGTAGAGATGATG
TATCCTGTTATGGCCCCTCTCTTCCGTGTCTACAATATTTATATGAAAAA
CTTGACGCAAGCAAGCTGAACGCGGCACAGATATCGGCATTCTTTGACCG
AGCCAGTATCGGTCTAGAATGTTTCATAGTTCTCTGCAGTGACCAAAGGG
CGAACAGGGACCCCATTTATTCTTTAGTCGACACGGCACCTTGTCTACGC
TTCCCATCTTTCCCACCCCTCTTGCAGGACGCCACTTCGTCGATGAAAAG
AGCCAAGCCGAGCCGAGCCGTATCAGCTCTTCATTTAGACACTACTATTA
CTAGGCTATATACTAGTGATACTAGTAGTTTCTCCCCTCACGTTCTCCAT
CCGTTTCTACTGCTGCCTGTACGCGCAGATCCTTAGCTCGCTCTTCCGAA
CGGGAACCGTGCCCAACGCGGCGACCTCTTCCCCCTCCTTCGCCGATTGG
TCCCCGACGGCCTCTGCTCACCAGCAAGACGTCGGTGTGACCCTGCCGGC
GCTAACTCCGGGACTCGGTGTTCCTGCCCCGGCTAGAGTACCGGCTCGCG
ACTGTAACGGCGAGAACAGGAGAGGACCCAAGGGCTCGACGGATGAGGAG
GTTAAGGTGGAGGGTCGGGAACTAGAGGAGGATGTGGGCGGGGTGGATGA
CGGTGCGGGCAGGCCGCGGTTGAGGGCGATGAAAGCCCTGGCAACCCTGG
CGTGGCCGGCGCCGCCGTCGCTGTGTCACCCGGGGAGCGCCGCCGCGGAG
AAGGTGGTACACGGCATGGCTTGCCTGGGCGAGGAGGAGGGCCAGGCGGG
TCTCGTGTTGGCGCTGGAAAGGTACTCGTGCTTTGCTTTGATAATCAAGG
ACACTCAACAGCTGGAGCTAACGTTTTATATTAGTAGTAATACAGAACAG
ACCCAGCTGTCCTGAAACCAATCGAAGGAAGTATAATGCACAAAAATGGC
GACAACATGTCTTCATGGGAGCACAAAGTAGAGGGATCTAGTGTGGTATA
ATCTAGTGTAGTGGATGTGCAGTCCGCGCGAGTGGTTCAGCTCGGTTGGG
TTGGGTTCGGCTCGGTTCGTTTGTCTTTCCTTGTGGGGCGAATCAATTAC
ACATACGAAGTATTTCTTAACTGTAAATATTCTGTAGGACGACGCGATGC
TTTGTGCAAGCACTTGCATCTGTTCAGAGTGAAACAATATTTCTGAAATT
TAAATCCTATTTCTCGGCACCGTACAAGTAGTATTTCTGAAGGGCAAAAC
ACTAAAACACTACATGTATTAAATAGTACCGTACTCTTTCTCTTATAGGA
GATTTCTCTTATAGGAGATTTCTCTTATAGGAGATTTATAGGAGAAAATA
AAGTCGGAGATGTGTTGGAAGGCGCGTGTGGCACATGTAGAAGGAGAGGA
GCTTGGTGGGGATCATGACGTCATGACCTAAGCGAGAGATGACGAAATAG
ACTCCTTCCCTTTGCGGACACGTTGTTCCTTCCCTTCATCTTTAGCAAGC
CTGTAATTCCGATTCTGACTCTTATTCTTACTCTGACCAGATGTATCTCC
GACCATGGCTGCGTGCCCCCGCCCCGAAAACGGAGGGGCATGGGCTCGTC
TATCATGGCTCTTGTAACGAGCCTCTCTGGGGGCAATCCACGGGATGGAG
GAATGACTGGCGATCAAGGTGCCTTATTTGTACTAGAAACGTTAAGAAGT
ATAACAATTTGTCAAATGAAGGGATAATCAAGGGATAATAGTTTTTAATC
ATGTTGTTGTCATTGAGGTAATGCGTAGAAACAATACGGGGGAAGTAACT
AGGTGCATTCTTAATTTCGTCGGACAGAAGCGCGCGGAAGAGAGATATAT
AGCGCTATATTTTACTTGCCAATCTCTTCTTGCTTTCCCGCCGAGGCGAG
CACCCTATACCCGCATCTCTCCCCCTCTCTCCCTCTCCCCCCCTCTCTTA
CCATACTCATCTCTAAATAGATCTCGTGAAATAACCGGGTCATGATCCCT
TGATGGTGCATGCTTTTCGTCAAGTCACCGCTGTCTGCTATTGTCTCTTG
TGCACTGTTCGTTATACCGTGGTGCCGTGAAAAGTATGTTTTCGTTGCCG
AGGGGTGTTGCAAGTGGCCCTCGCGGCGATGGAGGCGCACCAGCGGACGT
CGGCCTTGGCGGGATCGAGCTGGCCGGAGACCGTCGCGGCAGAGCGTGTT
CAGAGACAGGAGCTCAGGTGACGGATGGATACGATTTTGGGGTAGGGTGG
GGCGGCAAGGAATCGACGACGAGGGTTTGTCGAGAGCGGAGATTGGAGAT
TATAAGGGATGTCTTGCTGGGGGACCACGGACGACCACGATACCGCAACT
GTCGTGGTAAACCGGACAAAAGTGTATTATAATTAATTGTTCACCCAGAG
TGGAAGGCGTTATTGATTATATATATGGGTGTCTGCGCTCAAGGCTCCAG
CATCGTGTAGAGGCGCGCCCTTGGGTCATCAATTTTGAAGATATTTCATT
TTGTTCATCGTATGTGTGTGTGTGTGTGTGTGTTTATTCAATTGCACATA
AAAGCGCAATCTGGCTCTGTCATGCTAGCTCTTCTAGGCTACTCTCTCAT
TGATCCTCCCAATGGAGTATTCAATCATATCTATGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTCTGCGAGCGACCAGGGACGGCGGGACCTCGCGGGTG
GTCATGGAACATCTTTGCGCTACGCTTCAGTCGTCCAAGGCAGCTTTCTC
GGGCGTCGGGGAAGCGGAGGCGGCTTCGGAGCGGGGAGCTCTTCTGTTGG
CGTTGCGAGGAGTGTCGCTCGCTGAAGGAAACATCGGGGCTGATGAGGCC
ACCAGGTTCCGGAAG
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Coding sequence (CDS) from alignment at H-elongata_contig12872:2104..8268+

>mRNA_H-elongata_contig12872.2116.1 ID=mRNA_H-elongata_contig12872.2116.1|Name=mRNA_H-elongata_contig12872.2116.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2016bp|location=Sequence derived from alignment at H-elongata_contig12872:2104..8268+ (Himanthalia elongata Himel1 dioecious)
ATGTCTCAGCAGCTCAACATGTCTCAGCAGCTCAACGTTAGCCTAGTGAG
AATACTCAAGATCGAGGCACAAAGCAACATCAGGTCTCGCTTCGGGGGAG
ACTCGTATGATGCGTCATCTTCTCCCGTCACGGTTGAACGCCCTTCAGCG
CTCCATCACCATCACGAGACTCCGCCCGCCGTCCTCGTGAGCGTCCTCGT
GAGCGTCCTCCACTGCCCGCTGCACATGGGATGTTTCCTTCAATGTCCTC
CGAATCCTTGCCCCTCGGGTGGCTGTCCCGACCAAGATGAGCGGCAGCGA
TGCCCGGCCTTCTCCCTGGCGAGCCCCGCGTGCGCCGCGACCTTCCCTTT
GCGACGTTGCGATGTAAAAGGCGTTGGTGGGGCTGGCGCCGCGCTCTTGG
CTGCGGCCGCTGCGGTGAAGGGGAAGGGAGGGGTGGTAGGGGAAGAGGGT
ATCTCGGAGGGGCGTATTTCGGCCGAGGAAGTGCCCAGAGACGAGCGATT
GCGGTACAGGTTAGCCTAGTGAGAATACTCAAGATCGAGGCACAAAGCAA
CATCAGGTCTCGCTTCGGGGGAGACTCGTATGATGCGTCATCTTCTCCCG
TCACGGTTGAACGCCCTTCAGCGCTCCATCACCATCACGAGACTCCGCCC
GCCGTCCTCGTGAGCGTCCTCGTGAGCGTCCTCCACTGCCCGCTGCACAT
GGGATGTTTCCTTCAATGTCCTCCGAATCCTTGCCCCTCGGGTGGCTGTC
CCGACCAAGATGAGCGGCAGCGATGCCCGGCCTTCTCCCTGGCGAGCCCC
GCGTGCGCCGCGACCTTCCCTTTGCGACGTTGCGATGTAAAAGGCGTTGG
TGGGGCTGGCGCCGCGCTCTTGGCTGCGGCCGCTGCGGTGAAGGGGAAGG
GAGGGGTGGTAGGGGAAGAGGGTATCTCGGAGGGGCGTATTTCGGCCGAG
GAAGTGCCCAGAGACGAGCGATTGCGGTACAGACTCCTAGCCCACGTCCT
GGCCGAGGTGCTGTGGGAGCAGCTCCTTTTGGATACCAGCGGTGGTGGCG
GAGTGTTCACCCTCGGAGACACCTCTCGTCTTATCGGCACTACTCTAGTC
GCAGCGACTCCTAGCCCACGTCCTGGCCGAGGTGCTGTGGGAGCAGCTCC
TTTTGGATACCAGCGGTGGTGGCGGAGTGTTCACCCTCGGAGACACCTCT
CGTCTTATCGGCACTACTCTAGTCGCAGCGGCTGAAGAGATGAAGAGGAA
TTTCATCTCCAAAGCCGAGCGGAGCGGGGTGGCGTTTTCGGGAGGGGGCG
GTGGCACAGGATTGGAGAGACGCCAAGAAGCGGCGGTGGTTTTGGTCGAT
CGTACCTTGGATCTAGCGGCGGCATGTTCACGCGGTGGAAGCCTGCTCCA
GAGGGCTGAAGAGATGAAGAGGAATTTCATCTCCAAAGCCGAGCGGAGCG
GGGTGGCGTTTTCGGGAGGGGGCGGTGGCACAGGATTGGAGAGACGCCAA
GAAGCGGCGGTGGTTTTGGTCGATCGTACCTTGGATCTAGCGGCGGCATG
TTCACGCGGTGGAAGCCTGCTCCAGAGGATCCTTAGCTCGCTCTTCCGAA
CGGGAACCGTGCCCAACGCGGCGACCTCTTCCCCCTCCTTCGCCGATTGG
TCCCCGACGGCCTCTGCTCACCAGCAAGACGTCGGTGTGACCCTGCCGGC
GCTAACTCCGGGACTCGGTGTTCCTGCCCCGGCTAGAGTACCGGCTCGCG
ACTATCCTTAGCTCGCTCTTCCGAACGGGAACCGTGCCCAACGCGGCGAC
CTCTTCCCCCTCCTTCGCCGATTGGTCCCCGACGGCCTCTGCTCACCAGC
AAGACGTCGGTGTGACCCTGCCGGCGCTAACTCCGGGACTCGGTGTTCCT
GCCCCGGCTAGAGTACCGGCTCGCGACTGTGGAGGGTCGGGAACTAGAGG
AGGATGTGGGCGGGGTGGATGAGTGGAGGGTCGGGAACTAGAGGAGGATG
TGGGCGGGGTGGATGA
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