mRNA_H-elongata_contig12867.2109.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12867.2109.1
Unique NamemRNA_H-elongata_contig12867.2109.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: D8LHV2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV2_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 2.080e-146
Identity = 236/402 (58.71%), Postives = 269/402 (66.92%), Query Frame = 3
Query:  639 GPLGNPRFPVRNEYLAGWALTQNHTSSLERLLSMGYIFPGLSRQPSKLPYDFAPSEETQGSGV---LWGEATKALMHRMDITHDRDQRRLAASSYWQRLQE---------NGGGISANAD-----GSVPPSWADVHALFENDAGFVRRERERSMDEAAAFMPD--GWRDDEMSRAWVASYRLSVFETRRQAQRFFSWAIPDEGALDCLLEPGKRLVEVGSGLGYWALLLKARSGDDTRIRCFDPHAPAAH------TTARES---IGNGSPL-FGNAGAEE----EDDEADVWFGEERAPFTRTERGSFERIIDDSEGFRDWSLFVCWPSDGQWPRDCLQAFSGDDFFYVGEGEGGATRMPWRILGEEWQLERMVEIPRWPGFKDALWWYRRRGSAPLPTNR 1745
            G L NPR PV NEYLAGWALTQ  T+ L+R   MGY   G          + +P EET+G      LWGEATKALM R+DI HD DQRRLAAS YWQRLQ          N G      D     G   P+WADV ALFE+D GFVRRE ER ++EA   MP   GW  D +SR WVASY+LSVFETRRQAQRFFSW IPDEGALDC+LEPG R++EVGSGLGYWA LLK RSGDD+R+RCFDP AP A       TT  ES   +    P    N  + E     ++E D WFGE R PF+  ERGSF+RI  + +GFR WSL +CWPSDGQWP  CLQ F+G+DFFYVGEGEGGATRMPWR+L EEW+L R VEIP WPGF+DALWWY R+    L  +R
Sbjct:   82 GRLDNPRRPVPNEYLAGWALTQYDTACLQRFQDMGYTDCG--------DQESSP-EETKGEKAGFRLWGEATKALMDRVDIVHDLDQRRLAASRYWQRLQSTPPKEAPASNTGNKGKFTDLDPSPGLAAPTWADVDALFESDNGFVRRESERYIEEAREGMPSEGGWSGDRVSRQWVASYQLSVFETRRQAQRFFSWGIPDEGALDCILEPGNRVLEVGSGLGYWAYLLKLRSGDDSRVRCFDPFAPPARQRTEVSTTEDESGYSVEEAPPRSIENVPSPEPISMREEEVDDWFGEGREPFSPAERGSFDRIARE-DGFRKWSLLICWPSDGQWPAGCLQEFAGNDFFYVGEGEGGATRMPWRVLREEWELVRRVEIPTWPGFRDALWWYTRKEPGALSRDR 473          
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: D8LFK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK6_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.660e-11
Identity = 68/212 (32.08%), Postives = 98/212 (46.23%), Query Frame = 3
Query: 1164 FSWAIPDEGALDCLLEPGKRLVEVGSGLGYWALLLKARSGDDTRIRCFDP---------HAPAAHTTARESIGNGSPLFGNAGAEEEDDEADVWFGEERAPFTRTERGSFERIIDDSEGFRDWSLFVCWPSDGQWPRD-----CLQAFSGDDFFYVGEGEGGATRM-----PW-RILGEEWQLERM--------VEIPRWPGFKDALWWYRR 1715
            F+WAIPDE AL  +   G  +VEVGSGLGYWA LL+AR  D   I  +D           AP +  T  +S    + +   A  + ++D  +   GE  + + +   G  + + +      D SLF+C+P D +   +     CL AF GD   +VGE  G +  M     PW R   +E Q E          V +P WP  +D L  ++R
Sbjct:   82 FAWAIPDERALRIIKHFGP-IVEVGSGLGYWAKLLRARGVD---INPYDKVAGTPDTASAAPDSSQTKGKSTSKDAKVKSAAEGDGKEDADEGGGGEAPSFWIKVNEGGPDVLEEPCN--EDRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKR 287          
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: A0A6H5JT97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT97_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 2.280e-11
Identity = 72/214 (33.64%), Postives = 99/214 (46.26%), Query Frame = 3
Query: 1164 FSWAIPDEGALDCLLEPGKRLVEVGSGLGYWALLLKARSGDDTRIRCFDP---------HAPAAHTTARESIGNGSPLFGNA-GAEEEDDEADVWFGEERAPF-TRTERGSFERIIDDSEGFRDWSLFVCWPSDGQWPRD-----CLQAFSGDDFFYVGEGEGGATRM-----PW-RILGEEWQLERM--------VEIPRWPGFKDALWWYRR 1715
            F+WAIPDE AL  +   G  +VE+GSGLGYWA LL+AR  D   I  +D           AP +  T  +S    + +   A G  +ED  AD   G+E   F  +   G  + + +     R  SLF+C+P D +   +     CL AF GD   +VGE  G +  M     PW R   +E Q E          V +P WP  +D L  ++R
Sbjct:   81 FAWAIPDERALRIIKHFGP-IVEIGSGLGYWAKLLRARGVD---INAYDKVAGTPDTASAAPDSSRTKGKSTSKDAKVKSAAEGVVKED--ADEGGGDETPSFWIKVNEGGPDVLEEPCNEGR--SLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKR 286          
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: A0A1Q7Y9E7_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A1Q7Y9E7_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 2.730e-10
Identity = 58/197 (29.44%), Postives = 88/197 (44.67%), Query Frame = 3
Query: 1137 ETRRQAQRFFSWAIPDEGALDCLLEP-GKRLVEVGSGLGYWALLLKARSGDDTRIRCFDPHAPAAHTTARESIGNGSPLFGNAGAEEEDDEADVWFGEERAPFTRTERGSFERIIDDSEGFRDWSLFVCWPSDG-QWPRDCLQAFSGDDFFYVGEGEGGATRMP--WRILGEEWQLERMVEIPRWPGFKDALWWYRR 1715
            E R +  R ++WAI D  ++  +    G R VE+G+G GYWA  L  +  D   I  FD + P       + + N    F              W+     P T+   GS E + +        +LF+CWP+    +   CLQA+ G+ F ++GE EGG T     + +L +EWQ     +I +W G  D +  Y R
Sbjct:   29 EARDKCCRKYAWAIADPASVAFVARYLGPRAVEIGAGTGYWAWQLWQQGID---IIAFDHNPP-------DKVPN--DFFAPRTERPSKTLVKTWY-----PVTQ---GSSEVLSEHPNR----TLFLCWPNYATDFAAQCLQAYQGNRFVFIGENEGGCTGNADFFDLLEKEWQQVDAHQILQWSGIHDTIVVYER 201          
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: C1EA75_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EA75_MICCC)

HSP 1 Score: 66.6 bits (161), Expect = 1.110e-7
Identity = 55/189 (29.10%), Postives = 82/189 (43.39%), Query Frame = 3
Query: 1158 RFFSWAIPDEGALDCLLEPGKRLVEVGSGLGYWALLLKARSGDDTRIRCFDPHAPAAHTTARESIGNGSPLFGNAGAEEEDDEADVWFGEERAPFTRTERGSFERIIDDSEGFRDWSLFVCWPSDGQ-WPRDCLQAFSGDDFFYVGEGEGGATRMPW-RILGEEWQLERMVEIPRWPGFKDALWWYRRR 1718
            R F++A P   AL  L +     VEVG+GLGYWAL +++  G D       P+         E  G  SP     G  E D+ A   +    A F +   G       D   +++ +LF+C+P  G       ++   GD    VGE +G    + + R L E W L R V +P+W      L  ++R+
Sbjct:  473 RLFAFATPTRRALRALCDASVSWVEVGAGLGYWALAMESSFGMDVVALDKTPNT--------EGFGGDSP-----GGGEWDEGAMNEYHGRAASFVKVREGGPR----DLRRYKNRALFLCYPPPGDDLAARSIREHGGDVVAVVGEWDGNTGDVAFARELRESWNLARRVSLPQWGDTAHELTIWQRK 644          
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: A0A448ZI63_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI63_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.240e-7
Identity = 60/224 (26.79%), Postives = 81/224 (36.16%), Query Frame = 3
Query: 1134 FETRRQAQRFFSWAIPDEGALDCLLEPGKRLVEVGSGLGYWALLLKARSGDDTRIRCFDPHAPAAHTTARESIGNGSPLFGNAGAEEEDDEADVWFGEERAPFTRTERGSFERIIDDSEGFRDWSLFVCWPS-----------DGQWPRDCLQAFSGDDFFYVGEGEGGATRMP--W------------RILGEE----WQLERMVEIPRWPGFKDALW-WYRR 1715
            FE R     +F+WA+P E AL CL+E G  L+E+G+G GYWA LL  R  D       D      H   R SI                                 + GS E+        R  +L +CWP             G +    L+AF G    +VGE   G  R    W              L +E    ++L + V +P WP +   L  W R+
Sbjct:  290 FELRTCLCTYFAWAVPTENALQCLVELGVPLLEIGAGTGYWAWLLSKRGVDIAAYDLPDSQGGQKHRF-RHSI--------------------------------VKDGSIEQASSPEHKSR--ALLLCWPDIVGDSAHDDADRGDFGAKALRAFGGSTVVHVGELGPGVVRAAEGWGDPFPPGGSSSSAALQDELRAGFRLSKRVLLPNWPPYNSHLTVWVRK 478          
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: A0A1Q7RIW6_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium 13_1_20CM_50_12 TaxID=1805063 RepID=A0A1Q7RIW6_9CHLR)

HSP 1 Score: 60.1 bits (144), Expect = 1.270e-6
Identity = 52/207 (25.12%), Postives = 88/207 (42.51%), Query Frame = 3
Query: 1107 WVASYRLSVFETRRQAQRFFSWAIPDEGALDCLLEP-GKRLVEVGSGLGYWALLLKARSGDDTRIRCFDPHAPAAHTTARESIGNGSPLFGNAGAEEEDDEADVWFGEERAPFTRTERGSFERIIDDSEGFRDWSLFVCWPS-DGQWPRDCLQAFSGDDFFYVGEGEGGATRMP--WRILGEEWQLERMVEIPRWPGFKDALWWYRR 1715
            W   + +   E R +  + +++AI D  ++  + E  G R +E+G+G GYWA  L     D   I  +D   P                         D   + +F + +A +   ++G   +I+ +     D +LF+CWP   G    +CLQA+ G  F ++GE  GG T     + +L ++WQ      I +W    D +  Y R
Sbjct:   24 WDYHFIIQSSEARVRCCKMYAFAITDPASVSFVAEHLGTRAIEMGAGTGYWAWQLTQLGVD---ILAYDKFPP-------------------------DKLPNDYFSQIKA-WHPVQQGD-PKILTEHP---DRALFLCWPPYGGSLAHECLQAYQGHRFVFIGEDCGGCTGDDDFFALLDKDWQEIAEHPIQQWRYIHDVITVYER 197          
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: A0A7J6PNT4_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PNT4_PEROL)

HSP 1 Score: 60.8 bits (146), Expect = 6.240e-6
Identity = 54/201 (26.87%), Postives = 88/201 (43.78%), Query Frame = 3
Query: 1131 VFETRRQAQRFFSWAIPDEGALDCLLE--PGKRLVEVGSGLGYWALLLKARSGDDTRIRCFDPHAPAAHTTARESIGNGSPLFGNAGAEEEDDEADVWFGEERAPFTRTERGSFERIIDDSEGFRDWSLFVCWPSDGQ-WPRDCLQAFSGDDFFYVGE--GEGGATRMPWRILGEEWQLERMVEIPRWPGFKDALWWYRRR 1718
            V  TR      +++A P E ALD L +  PG  +VEVGSG GYWA LL+ R      +   D + P                         D +A+ + G  R P T  ++G+    ++         L +C+P   +    + +  F GD  F++GE  G+ G+  M  + LG+ +++ R   +P WP     +  ++RR
Sbjct:  368 VDATRDYMCHIYAYATPTESALDLLSDFVPGG-VVEVGSGTGYWAKLLRDRR---VEVLALDKNPP-------------------------DHQANAYHGRCR-PHTEVKKGN-ATDLESLSPMEYPKLMLCYPPPQEHMAAEAIGNFKGDYVFHIGEWFGDTGSLAMQ-KALGQSFRMIRREPLPNWPSTSYEMTIWKRR 536          
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: A0A7J6SCU9_PEROL (TRANSKETOLASE_1 domain-containing protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SCU9_PEROL)

HSP 1 Score: 59.3 bits (142), Expect = 9.840e-6
Identity = 51/190 (26.84%), Postives = 85/190 (44.74%), Query Frame = 3
Query: 1164 FSWAIPDEGALDCLLE--PGKRLVEVGSGLGYWALLLKARSGDDTRIRCFDPHAPAAHTTARESIGNGSPLFGNAGAEEEDDEADVWFGEERAPFTRTERGSFERIIDDSEGFRDWSLFVCWPSDGQ-WPRDCLQAFSGDDFFYVGE--GEGGATRMPWRILGEEWQLERMVEIPRWPGFKDALWWYRRR 1718
            +++A P E ALD L +  PG  +VEVGSG GYWA LL+ R      +   D + P                         D +A+ + G  R P T  ++G+    ++         L +C+P   +    + +  F GD  F++GE  G+ G+  M  + LG+ +++ R   +P WP     +  ++RR
Sbjct:    1 YAYATPTESALDLLSDFVPGG-VVEVGSGTGYWAKLLRDRR---VEVLALDKNPP-------------------------DHQANAYHGRCR-PHTEVKKGN-ATDLESLSPMEYPKLMLCYPPPQEHMAAEAIGNFKGDYVFHIGEWFGDTGSLAMQ-KALGQSFRMIRREPLPNWPSTSYEMTIWKRR 158          
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Match: C5L776_PERM5 (Uncharacterized protein n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L776_PERM5)

HSP 1 Score: 57.8 bits (138), Expect = 5.700e-5
Identity = 60/240 (25.00%), Postives = 102/240 (42.50%), Query Frame = 3
Query: 1023 VRRERERSMDEAAAFMPDGWRDDEMSRAWVASYRLSVFETRRQAQRFFSWAIPDEGALDCLLE--PGKRLVEVGSGLGYWALLLKARSGDDTRIRCFDPHAPAAHTTARESIGNGSPLFGNAGAEEEDDEADVWFGEERAPFTRTERGSFERIID-DSEGFRDWSLFVCWPSDGQ-WPRDCLQAFSGDDFFYVGE--GEGGATRMPWRILGEEWQLERMVEIPRWPGFKDALWWYRRRGS 1724
             R E  +++ +    MP     D     WV S       TR      +++A P E AL+ L    PG  +VEVGSG GYWA LL+ R+    ++   D + P                         D +A+ + G  R P T  ++G+   +    +E +    L +C+P   +    + +  F GD  +++GE  G+ G   M  + LG+ +++ R   +P WP     +  ++RR +
Sbjct:  346 TRAEETQTLKQGDPLMPSKILSD-----WVDS-------TRDYMCHIYAYATPTESALELLSSFVPGG-VVEVGSGTGYWAKLLRDRN---VKVLALDKNPP-------------------------DHQANAYHGRCR-PHTEVKKGNAADLQSLSAEEYP--KLMLCYPPPQEHMAAEAIGNFKGDYVYHIGEWFGDTGTLAMQ-KALGQGFRMIRREPLPNWPSTSYEMTIWKRRSN 540          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12867.2109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LHV2_ECTSI2.080e-14658.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LFK6_ECTSI1.660e-1132.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JT97_9PHAE2.280e-1133.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Q7Y9E7_9BACT2.730e-1029.44Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
C1EA75_MICCC1.110e-729.10Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A448ZI63_9STRA7.240e-726.79Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Q7RIW6_9CHLR1.270e-625.12Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A7J6PNT4_PEROL6.240e-626.87Uncharacterized protein n=2 Tax=Perkinsus olseni T... [more]
A0A7J6SCU9_PEROL9.840e-626.84TRANSKETOLASE_1 domain-containing protein (Fragmen... [more]
C5L776_PERM55.700e-525.00Uncharacterized protein n=2 Tax=Perkinsus marinus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12867contigH-elongata_contig12867:3665..6443 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score81.6
Seed ortholog evalue7.5e-13
Seed eggNOG ortholog2880.D8LFK6
EggNOG OGs29WS3@1,2RXQ6@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1987
Cds size1011
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12867.2109.1prot_H-elongata_contig12867.2109.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12867 3904..5706 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929764.6756098-UTR-H-elongata_contig12867:3664..39031622929764.6756098-UTR-H-elongata_contig12867:3664..3903Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12867 3665..3903 -
1691679148.7893333-UTR-H-elongata_contig12867:3664..39031691679148.7893333-UTR-H-elongata_contig12867:3664..3903Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12867 3665..3903 -
1622929764.7356834-UTR-H-elongata_contig12867:5706..64431622929764.7356834-UTR-H-elongata_contig12867:5706..6443Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12867 5707..6443 -
1691679148.8235826-UTR-H-elongata_contig12867:5706..64431691679148.8235826-UTR-H-elongata_contig12867:5706..6443Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12867 5707..6443 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929764.6920567-CDS-H-elongata_contig12867:3903..44621622929764.6920567-CDS-H-elongata_contig12867:3903..4462Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 3904..4462 -
1691679148.8000698-CDS-H-elongata_contig12867:3903..44621691679148.8000698-CDS-H-elongata_contig12867:3903..4462Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 3904..4462 -
1622929764.7080674-CDS-H-elongata_contig12867:4757..50171622929764.7080674-CDS-H-elongata_contig12867:4757..5017Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 4758..5017 -
1691679148.8080556-CDS-H-elongata_contig12867:4757..50171691679148.8080556-CDS-H-elongata_contig12867:4757..5017Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 4758..5017 -
1622929764.720111-CDS-H-elongata_contig12867:5514..57061622929764.720111-CDS-H-elongata_contig12867:5514..5706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 5515..5706 -
1691679148.8153431-CDS-H-elongata_contig12867:5514..57061691679148.8153431-CDS-H-elongata_contig12867:5514..5706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 5515..5706 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12867.2109.1

>prot_H-elongata_contig12867.2109.1 ID=prot_H-elongata_contig12867.2109.1|Name=mRNA_H-elongata_contig12867.2109.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=337bp
MGYIFPGLSRQPSKLPYDFAPSEETQGSGVLWGEATKALMHRMDITHDRD
QRRLAASSYWQRLQENGGGISANADGSVPPSWADVHALFENDAGFVRRER
ERSMDEAAAFMPDGWRDDEMSRAWVASYRLSVFETRRQAQRFFSWAIPDE
GALDCLLEPGKRLVEVGSGLGYWALLLKARSGDDTRIRCFDPHAPAAHTT
ARESIGNGSPLFGNAGAEEEDDEADVWFGEERAPFTRTERGSFERIIDDS
EGFRDWSLFVCWPSDGQWPRDCLQAFSGDDFFYVGEGEGGATRMPWRILG
EEWQLERMVEIPRWPGFKDALWWYRRRGSAPLPTNR*
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mRNA from alignment at H-elongata_contig12867:3665..6443-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12867.2109.1 ID=mRNA_H-elongata_contig12867.2109.1|Name=mRNA_H-elongata_contig12867.2109.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2779bp|location=Sequence derived from alignment at H-elongata_contig12867:3665..6443- (Himanthalia elongata Himel1 dioecious)
TTCAGAACGGCGGGTTGCTGTCTCAGTCGTTGAGCTGTATTCGACTGGGG ATGATACACAAGGCCAATGGGAAGATAGGGCGAGACCAGATGACAACTTT GCACAACTGTAACAAATATCGCATGAGAACTCCAGGGTTTACAGTAGCCG AAAGAAAGAGAAGCGTTTGTTTGCCTCCAAATTCGATCGTTGACTGTACA GCAGACGCAAAATGTCGTTACAAGTTGGGCCGACCAAGAACCATAGGTGA ATGGAGGACTGCGAAGTGTGATGTCCCATATGTCGCCCTCTCGCCTTATC AACGTGCCCACATGAAGAAATTTCGTTTTCTTGGTGTGAAGCGCGACGCA TACATGCCATAAACAGAGGTTACGGACATCACGCGGTCCGTCAAAGTAAC GAAGCAAGGCTTGCAATGGCTAAGCTTTTCCACCTCGCACTGAACTCGAC TTAGTAGCCCAACTCCCTCCTTTGTTCACGACCAACACCGATGATGACTG GCGTGCTTGAAGCCCCTGGTCTCCAGATCGAGATCTCGTGTTAAGCCGAT CCGTTATTTGTCATTTGCATATCGTTGCTTCGTTTTCCGCCTCTTCTTCT GTTTGTATTTGTTTTTTCGTCTTGTCCTGGCCTAGGGTGGACCGCTTGGA AACCCCCGCTTTCCCGTCCGCAATGAATACTTGGCCGGATGGGCACTGAC TCAGAACCACACAAGCTCTCTCGAGCGACTGCTGAGCATGGGGTATATTT TTCCCGGTCTGTCGAGGCAACCCTCGAAGCTCCCATATGACTTTGCACCA TCCGAAGAAACTCAAGGCAGTGGGGTGCTATGGGGGGAGGCAACCAAGGC GCTGATGCACCGGATGGACATCACCCACGACCGCGATCAGAGGAGGCTAG CGGCCTCGAGCTACTGGCAGCGCCTGCAGGTGCATTGCGCGCAGTTATTG CGTACGTAGTTGCACAAGCGGTTGGAGGTAATTGCAACGTAGTACTGCAT ATTTACATACCTATATTTTGGGGGCCAGTTCTACCCACGGAGCGATATCT CCACCGCGCATGATCCGGTACATTGCAGGGTTATTAGTTATTAGTTAATA ATAGTCGTAATATTCCTGCTGTAAATCCTACCGTAAGTAGAGAACCCTTC CTTTATATCTGGTAGCTTATTCCAAAATCGACCAGCGTGGCCTTTTTTTG GCGCAGCGCTACTTTAATTGTTTACGGCTACGGACGTGAGGCCTTCCCAC CGTCTCTCGCACGCAGTGCCCCCATTTTCCCGATACCCGCTTTGGTCAAT GCTGCCAGATACCGTAAGGCGATGCACGCTGAGGATGTGCGAAACAAACG TTGGAACGCCAACCTTTTTCCACACGATTTTGAAAAAGTGCAACGCGCAT CCTTTCATGTGCTCACGGTACACTAGGAAAATGGCGGAGGAATATCCGCA AACGCGGATGGCTCCGTCCCCCCATCCTGGGCAGATGTGCACGCCCTGTT CGAGAATGACGCCGGCTTTGTTCGGCGGGAAAGAGAACGCTCTATGGATG AGGCGGCGGCATTTATGCCCGATGGGTGGCGGGATGACGAGATGTCGCGG GCGTGGGTGGCGAGCTACCGCCTGTCCGTCTTCGAAACCCGACGTCAGGC CCAGCGATTCTTTTCGTGGGCGATCCCAGACGAAGGGTGGGTCGCGTGGC TGTTGCGATCGATTGAAGCGTTATTTATGGAAGTCCGACCGCAATTAGAA GGCGTATGGTCATCCAGATGACATCAAAAGAATGAAGCATTTTCATGTTC CACTGCTTTGCCAAGCCACGCTTGCCCTTGAAAGCGCACATATCATGTCG AAAGAAATGTCACCACGCTCGGGCCGCAAGCTGTCCCTGCTTCCCTGGCG CACACCGGAGACAGCTTCAGCACCACAAGATTCGCTGCTCTCACCCAGAG TACTTACCTCGTCGCTTGCATCGCTTCGCAGAGCCCTCGACTGCCTGTTA GAGCCAGGGAAGCGGTTGGTCGAAGTAGGATCCGGGCTAGGCTACTGGGC ACTTCTTCTCAAGGCAAGGAGCGGGGACGATACACGCATTCGCTGCTTCG ATCCTCACGCGCCCGCGGCACACACCACGGCTCGGGAGTCCATCGGCAAC GGCTCGCCATTGTTTGGGAACGCGGGCGCCGAGGAAGAGGATGACGAGGC CGACGTGTGGTTTGGCGAAGAACGCGCACCGTTCACCCGCACGGAGCGGG GGTCCTTCGAGCGAATCATCGACGATTCGGAGGGCTTCCGAGACTGGTCG CTCTTTGTTTGCTGGCCCAGCGACGGCCAGTGGCCTAGAGACTGCCTTCA GGCCTTCAGCGGGGACGATTTCTTTTACGTCGGGGAAGGGGAGGGCGGCG CCACTCGCATGCCCTGGCGAATATTGGGAGAGGAGTGGCAGCTGGAGAGA ATGGTCGAAATCCCGCGATGGCCAGGTTTCAAGGACGCGCTCTGGTGGTA CAGGAGACGGGGCTCGGCGCCGCTGCCAACGAACAGATAGACAGCCTGGC CCACGTGCCCCCATGATTTCGCTGTCGACAATACCGCCATGGTTTTGCCA CGATCGGTGCCACCGCTGGTGATCTGTTCCTGGACCTTATCGAGTTTCAT CCCTGACGGTAGCAGGACGCCACAAGTAACTGGCGGGTCTGCCTCCTAGG CCGTGCCAGAGCTTCAGCAAAAAAAAATGTTTGTCCGCATGACATTGACT GACGGTAGAAAAAGTTCAATGAAATCCTC
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Coding sequence (CDS) from alignment at H-elongata_contig12867:3665..6443-

>mRNA_H-elongata_contig12867.2109.1 ID=mRNA_H-elongata_contig12867.2109.1|Name=mRNA_H-elongata_contig12867.2109.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2022bp|location=Sequence derived from alignment at H-elongata_contig12867:3665..6443- (Himanthalia elongata Himel1 dioecious)
ATGGGGTATATTTTTCCCGGTCTGTCGAGGCAACCCTCGAAGCTCCCATA
TGACTTTGCACCATCCGAAGAAACTCAAGGCAGTGGGGTGCTATGGGGGG
AGGCAACCAAGGCGCTGATGCACCGGATGGACATCACCCACGACCGCGAT
CAGAGGAGGCTAGCGGCCTCGAGCTACTGGCAGCGCCTGCAGATGGGGTA
TATTTTTCCCGGTCTGTCGAGGCAACCCTCGAAGCTCCCATATGACTTTG
CACCATCCGAAGAAACTCAAGGCAGTGGGGTGCTATGGGGGGAGGCAACC
AAGGCGCTGATGCACCGGATGGACATCACCCACGACCGCGATCAGAGGAG
GCTAGCGGCCTCGAGCTACTGGCAGCGCCTGCAGGAAAATGGCGGAGGAA
TATCCGCAAACGCGGATGGCTCCGTCCCCCCATCCTGGGCAGATGTGCAC
GCCCTGTTCGAGAATGACGCCGGCTTTGTTCGGCGGGAAAGAGAACGCTC
TATGGATGAGGCGGCGGCATTTATGCCCGATGGGTGGCGGGATGACGAGA
TGTCGCGGGCGTGGGTGGCGAGCTACCGCCTGTCCGTCTTCGAAACCCGA
CGTCAGGCCCAGCGATTCTTTTCGTGGGCGATCCCAGACGAAGGGAAAAT
GGCGGAGGAATATCCGCAAACGCGGATGGCTCCGTCCCCCCATCCTGGGC
AGATGTGCACGCCCTGTTCGAGAATGACGCCGGCTTTGTTCGGCGGGAAA
GAGAACGCTCTATGGATGAGGCGGCGGCATTTATGCCCGATGGGTGGCGG
GATGACGAGATGTCGCGGGCGTGGGTGGCGAGCTACCGCCTGTCCGTCTT
CGAAACCCGACGTCAGGCCCAGCGATTCTTTTCGTGGGCGATCCCAGACG
AAGGAGCCCTCGACTGCCTGTTAGAGCCAGGGAAGCGGTTGGTCGAAGTA
GGATCCGGGCTAGGCTACTGGGCACTTCTTCTCAAGGCAAGGAGCGGGGA
CGATACACGCATTCGCTGCTTCGATCCTCACGCGCCCGCGGCACACACCA
CGGCTCGGGAGTCCATCGGCAACGGCTCGCCATTGTTTGGGAACGCGGGC
GCCGAGGAAGAGGATGACGAGGCCGACGTGTGGTTTGGCGAAGAACGCGC
ACCGTTCACCCGCACGGAGCGGGGGTCCTTCGAGCGAATCATCGACGATT
CGGAGGGCTTCCGAGACTGGTCGCTCTTTGTTTGCTGGCCCAGCGACGGC
CAGTGGCCTAGAGACTGCCTTCAGGCCTTCAGCGGGGACGATTTCTTTTA
CGTCGGGGAAGGGGAGGGCGGCGCCACTCGCATGCCCTGGCGAATATTGG
GAGAGGAGTGGCAGCTGGAGAGAATGGTCGAAATCCCGCGATGGCCAGGT
TTCAAGGACGCGCTCTGGTGGTACAGGAGACGGGGCTCGGCGCCGCTGCC
AACGAACAGATAGAGCCCTCGACTGCCTGTTAGAGCCAGGGAAGCGGTTG
GTCGAAGTAGGATCCGGGCTAGGCTACTGGGCACTTCTTCTCAAGGCAAG
GAGCGGGGACGATACACGCATTCGCTGCTTCGATCCTCACGCGCCCGCGG
CACACACCACGGCTCGGGAGTCCATCGGCAACGGCTCGCCATTGTTTGGG
AACGCGGGCGCCGAGGAAGAGGATGACGAGGCCGACGTGTGGTTTGGCGA
AGAACGCGCACCGTTCACCCGCACGGAGCGGGGGTCCTTCGAGCGAATCA
TCGACGATTCGGAGGGCTTCCGAGACTGGTCGCTCTTTGTTTGCTGGCCC
AGCGACGGCCAGTGGCCTAGAGACTGCCTTCAGGCCTTCAGCGGGGACGA
TTTCTTTTACGTCGGGGAAGGGGAGGGCGGCGCCACTCGCATGCCCTGGC
GAATATTGGGAGAGGAGTGGCAGCTGGAGAGAATGGTCGAAATCCCGCGA
TGGCCAGGTTTCAAGGACGCGCTCTGGTGGTACAGGAGACGGGGCTCGGC
GCCGCTGCCAACGAACAGATAG
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