mRNA_H-elongata_contig128532.2101.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 219 bits (558), Expect = 1.370e-63 Identity = 144/411 (35.04%), Postives = 213/411 (51.82%), Query Frame = 1
Query: 10 RQLDVDMAYLEADVEEEIYVELPEAYRDSRKQFGLLKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERFGA*RR-----PAS---SHLWQEEK----PFRNQTARKRTQRFPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSRIDVT-IKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSVDVKTFE 1203
R D+ A++++D++E++++ LPE L K +YGL A W L GF + AD CVFR I G VVV +V ++DD+ +R + Q RDL + P+ +L + +Y GC RD +AGTLK Q Y + FG P S Q+E+ PFR SL Q TRPDI+ A +A++ +P+ HWR L Y+ R DLGIT+ G + ++DAD + RRSVSG VM GG ISWFSR QK +++E+EYV+LA+++ E+ FLRQV FM + I + EDN+GAI++A++ S+ ++H+D++HH +R+ + + I +V S QHAD LTK++ FE
Sbjct: 36 RHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIG-----------SLMWLATQ------TRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFE 428
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 219 bits (558), Expect = 6.460e-62 Identity = 144/411 (35.04%), Postives = 213/411 (51.82%), Query Frame = 1
Query: 10 RQLDVDMAYLEADVEEEIYVELPEAYRDSRKQFGLLKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERFGA*RR-----PAS---SHLWQEEK----PFRNQTARKRTQRFPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSRIDVT-IKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSVDVKTFE 1203
R D+ A++++D++E++++ LPE L K +YGL A W L GF + AD CVFR I G VVV +V ++DD+ +R + Q RDL + P+ +L + +Y GC RD +AGTLK Q Y + FG P S Q+E+ PFR SL Q TRPDI+ A +A++ +P+ HWR L Y+ R DLGIT+ G + ++DAD + RRSVSG VM GG ISWFSR QK +++E+EYV+LA+++ E+ FLRQV FM + I + EDN+GAI++A++ S+ ++H+D++HH +R+ + + I +V S QHAD LTK++ FE
Sbjct: 210 RHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIG-----------SLMWLATQ------TRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFE 602
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE) HSP 1 Score: 210 bits (535), Expect = 8.580e-61 Identity = 134/368 (36.41%), Postives = 194/368 (52.72%), Query Frame = 1
Query: 115 LKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERFGA*-----RRPASSHLWQEEKPFRNQTARKRTQRFPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSR-IDVTIKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSVDVKTF 1200
L K +YGL A W L A GF++ AD CVFR + G VV+++V ++DD+ A TK +Q +DL P+ L E +Y GC+ RDR AG L Q Y + ER G P + LW + + + +P +G TRPDI+ A +A++ P+ HWR A L Y R GI++ G L + DAD + RRSVSG VM AGGAI+WFS+ QK +++++EYVA+A+M E+ FLR+V FM + + I ++EDNEGAI++AKH S+ ++H+D++HH +R +D V I +V S QHAD LTK++ + F
Sbjct: 17 LNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRLVEDGEVVLILVVHVDDIF-AVGTKERCDQFGKDLGEYVPVKSLGELQWYSGCYYERDREAGRLTISQETYTKELGERHGVEWGGGIPLPTTWRLW-------DSDVNEPSVEYPFRALIGSLLWVALL---TRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKALPERDF 373
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 218 bits (554), Expect = 3.920e-59 Identity = 143/411 (34.79%), Postives = 213/411 (51.82%), Query Frame = 1
Query: 10 RQLDVDMAYLEADVEEEIYVELPEAYRDSRKQFGLLKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERFGA*RR-----PAS---SHLWQEEK----PFRNQTARKRTQRFPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSRIDVT-IKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSVDVKTFE 1203
R D+ A++++D++E++++ LPE L K +YGL A W L GF + AD CVFR I G VVV +V ++DD+ +R + Q RDL + P+ +L + +Y GC RD +AGTLK Q Y + FG P S Q+E+ PFR SL Q TRPDI+ A +A++ +P+ HWR L Y+ R DLGIT+ G + ++DAD + RRSVSG VM GG ISWFSR QK +++E+EYV+LA+++ E+ FLRQV FM + I + EDN+GAI++A++ S+ ++H+D++HH +R+ + + I +V S QHA+ LTK++ FE
Sbjct: 731 RHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCD-QFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIG-----------SLMWLATQ------TRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFE 1123
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 206 bits (525), Expect = 1.810e-58 Identity = 131/399 (32.83%), Postives = 208/399 (52.13%), Query Frame = 1
Query: 19 DVDMAYLEADVEEEIYVELPEAYRDSRKQFGLLKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERFGA*RR---PASSHLWQEEKPFRNQTARKRTQRFPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSRIDVT-IKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSVDVKTFE 1203
DV+ A++ +++EE++Y+ LP+ L K +YGL A W L A GF++ AD CVFR I G VV+++V ++DD+ +R ++ DL P+ +L E +Y GC R++ G L Q + +A +G P SS + + A + FP + +G TRPDI+ A +A++ +P+ HW A L Y R GI++ G L + DAD + RRSVSG V GGA+SWFSR QK +++E+EYVAL ++V E+ FLRQ+ FM ++ + I + EDN+GAI++A++ S+ ++H+D++HH +R+ ++ + + +V S Q AD LTKS+ FE
Sbjct: 63 DVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGA-DLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-----KLSDFDADEVATEFPFRELVGSLMWLAT---QTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFE 452
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 207 bits (527), Expect = 2.590e-58 Identity = 143/404 (35.40%), Postives = 216/404 (53.47%), Query Frame = 1
Query: 13 QLDVDMAYLEADVEEEIYVELPEAYRDSRKQFGLLKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERFGA*R-----RPA--SSHLWQEEKPFRNQTARKRTQRFPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSRIDVTIKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSVDVKTFE 1203
QLDVD A+L AD++E++Y+E PE + + L K +YGL AG W K L GF+ +D C++ G + + Y+DD++V T+ ++ + + + F I +L + LG I DR L Q Y+ T+ ERF P S L + + P +Q + ++R P +G C Q TRPDI+FA L++F +NP P HW A + L+YL RD GI+YGG+ T + + DAD T + RRSVSG +MM GG I + ++ Q A +SSE+EY+AL+ E+ ++R + + I I++ EDN+GAI +A + T+H+DI+HH VRD + V+ + YV + +Q ADILTKS+ K FE
Sbjct: 103 QLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTYICL-YVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKR-PYRSLIG--CLQYV-AQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPV-VFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSYVETQRQLADILTKSLGTKRFE 500
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A6H5JRZ9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ9_9PHAE) HSP 1 Score: 205 bits (522), Expect = 2.690e-58 Identity = 132/368 (35.87%), Postives = 195/368 (52.99%), Query Frame = 1
Query: 115 LKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERFGA*-----RRPASSHLWQEEKPFRNQTARKRTQRFPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSR-IDVTIKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSVDVKTF 1200
L +YGL A W L A GF + AD CVFR + G VV+++V ++DD+ A TK +Q +DL P+ L E +Y GC+ RDR AG L Q Y + ER+G P + LW + A + + P +G TRPDI+ + +A+++ P+ HW+ A L Y R GI++ G L +++AD + RRSVSG VM AGGAI+WFS+ QK +++++EYVA+A+M E+ FLRQV FM + + I ++EDNEGAI++AKH S+ ++H+D++HH +R +D V I +V S QHAD LTK++ + F
Sbjct: 69 LNNSLYGLRQASREWYALLKKCLLALGFGQCMADSCVFRFVEEGEVVLLLVVHVDDIF-AVGTKERCDQFGKDLGEYVPVKSLGELKWYSGCYYERDREAGRLTISQQTYTEELGERYGVEWGGGIPLPTTWKLW-------DFDADEPSVEHPFRALVGSLLWIALL---TRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGISFQSGTVSGFSLITFVNADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKALPEREF 425
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 215 bits (548), Expect = 2.980e-58 Identity = 135/396 (34.09%), Postives = 218/396 (55.05%), Query Frame = 1
Query: 19 DVDMAYLEADVEEEIYVELPEAYRDSRKQFGLLKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERF---GA*RRPASSHLWQEEKPFRNQTARKRTQR---FPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSRID-VTIKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSV 1185
DV AY A ++EE++++LP D + ++ +YGL +G W L GF++ +ADPCVFR+++ +VV++IV Y+DD+LVA + + D E+ + L FP +L E ++ GC I RD AGTL+ Q YI ++ ERF R PA+ P + ++ + +P +++G +RPD+SFA +A+ P HW K L YL RDLGITY + G G L+ ++DA ++ RRSVSG A + G +S S+ Q + + +S+E+EY+A E V E F+R V F+ +IK+ EDN+GAI + ++ SS T+H+D+++H +R + +++V + +QHAD+LTK++
Sbjct: 849 DVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPAT--------PGADLGPKREDEEGGEWPVREAIGSMMWVSTF---SRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 215 bits (548), Expect = 3.360e-58 Identity = 135/396 (34.09%), Postives = 218/396 (55.05%), Query Frame = 1
Query: 19 DVDMAYLEADVEEEIYVELPEAYRDSRKQFGLLKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERF---GA*RRPASSHLWQEEKPFRNQTARKRTQR---FPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSRID-VTIKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSV 1185
DV AY A ++EE++++LP D + ++ +YGL +G W L GF++ +ADPCVFR+++ +VV++IV Y+DD+LVA + + D E+ + L FP +L E ++ GC I RD AGTL+ Q YI ++ ERF R PA+ P + ++ + +P +++G +RPD+SFA +A+ P HW K L YL RDLGITY + G G L+ ++DA ++ RRSVSG A + G +S S+ Q + + +S+E+EY+A E V E F+R V F+ +IK+ EDN+GAI + ++ SS T+H+D+++H +R + +++V + +QHAD+LTK++
Sbjct: 1228 DVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPAT--------PGADLGPKREDEEGGEWPVREAIGSMMWVSTF---SRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1608
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 215 bits (548), Expect = 3.400e-58 Identity = 135/396 (34.09%), Postives = 218/396 (55.05%), Query Frame = 1
Query: 19 DVDMAYLEADVEEEIYVELPEAYRDSRKQFGLLKKEMYGLVHAGLLWSKQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVAYIDDLLVASATKRDEEQAVRDLCSCFPINDLEEATYYLGCHITRDRNAGTLKFGQHQYIHTVAERF---GA*RRPASSHLWQEEKPFRNQTARKRTQR---FPTEKSLGP*CGQRQ*PGPTRPDISFAAHQLAKFNDNPRPTHWREAPKALQYLWRPRDLGITYGGEPGGGTKLSAWIDADCVTCQNLRRSVSGRAVMMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSRID-VTIKIHEDNEGAIKMAKHRFSSRLTRHVDIKHHIVRDAIDGWVVHIEYVRSGKQHADILTKSV 1185
DV AY A ++EE++++LP D + ++ +YGL +G W L GF++ +ADPCVFR+++ +VV++IV Y+DD+LVA + + D E+ + L FP +L E ++ GC I RD AGTL+ Q YI ++ ERF R PA+ P + ++ + +P +++G +RPD+SFA +A+ P HW K L YL RDLGITY + G G L+ ++DA ++ RRSVSG A + G +S S+ Q + + +S+E+EY+A E V E F+R V F+ +IK+ EDN+GAI + ++ SS T+H+D+++H +R + +++V + +QHAD+LTK++
Sbjct: 1248 DVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPAT--------PGADLGPKREDEEGGEWPVREAIGSMMWVSTF---SRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128532.2101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig128532.2101.1 >prot_H-elongata_contig128532.2101.1 ID=prot_H-elongata_contig128532.2101.1|Name=mRNA_H-elongata_contig128532.2101.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp MMAGGAISWFSRVQKVTATASSESEYVALAEMVNELHFLRQVKEFMTSRIback to top mRNA from alignment at H-elongata_contig128532:655..1875- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig128532.2101.1 ID=mRNA_H-elongata_contig128532.2101.1|Name=mRNA_H-elongata_contig128532.2101.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1221bp|location=Sequence derived from alignment at H-elongata_contig128532:655..1875- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig128532:655..1875- >mRNA_H-elongata_contig128532.2101.1 ID=mRNA_H-elongata_contig128532.2101.1|Name=mRNA_H-elongata_contig128532.2101.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at H-elongata_contig128532:655..1875- (Himanthalia elongata Himel1 dioecious)back to top |