prot_H-elongata_contig127501.2035.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: D7FRQ9_ECTSI (Dynein light intermediate chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ9_ECTSI) HSP 1 Score: 150 bits (379), Expect = 9.120e-41 Identity = 86/175 (49.14%), Postives = 96/175 (54.86%), Query Frame = 0
Query: 1 MLRDAMRRSRLPDGTLLLVGSQGCGKSTLLDTI-------SAANARG-----------------------------------------------------FHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCSELEFEGLLQTVLRPEQLANTTAVVTVDLSRPWEAMDSVEK 115
MLRDAMRRSRLP TL+ VG +GCGKS+LLDT S N G FHPVL+Y+YLDA DP+EQG+ERD+SPPRVSVW CS LEFE LL+TVLRPE+L N VV VDLSRPWE MDSVEK
Sbjct: 34 MLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQGSASTNNPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIAGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEK 208
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: A0A835Z2Q1_9STRA (Dynein light intermediate chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q1_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.200e-19 Identity = 54/139 (38.85%), Postives = 72/139 (51.80%), Query Frame = 0
Query: 1 MLRDAMRRSRLPDGTLLLVGSQGCGKSTLLDTISAANAR-----------GFHPVLAYSYLDATDPSEQ---GSERDDSPPRVSVWCCSELEFEGLLQTVLRPEQ-----------LANTTAVVTVDLSRPWEAMDSVE 114
+LR+A R PD ++ VG +G GK+ L++ ++ A R FHPVLAY Y +A D + Q GS DSPPRVSVW CS+ F +L V Q A A+V VDL+RPWEA+ + E
Sbjct: 19 LLREAATAERPPDSVIICVGPRGSGKTALVERLTGAAPRKQDATGEEPPPDFHPVLAYDYFEARDAAAQSSSGSAFSDSPPRVSVWSCSDARFVDILTAVTASTQHAPPPPAAAGVAAPALALVAVDLTRPWEAVPAAE 157
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: A0A3Q2UA86_CHICK (Dynein light intermediate chain n=1 Tax=Gallus gallus TaxID=9031 RepID=A0A3Q2UA86_CHICK) HSP 1 Score: 68.9 bits (167), Expect = 4.040e-12 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 0
Query: 8 RSRLPDG-TLLLVGSQGCGKSTLLDTISAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCS-ELEFEGLLQTVLRPEQLANTTAVVTVDLSRPWEAMDSVEK 115
RS+LP G T+L++G G GK+TL+ + A L Y YL+ D +RDD R +VW ++ +GLL+ + E L +T + VD+SRPW AM+S+EK
Sbjct: 21 RSKLPSGKTILVLGDNGSGKTTLMAKLQGAEHGQKGRGLEYLYLNVHD-----EDRDDHT-RCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWTAMESLEK 124
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: UPI000523A8E9 (cytoplasmic dynein 1 light intermediate chain 1 n=2 Tax=Neognathae TaxID=8825 RepID=UPI000523A8E9) HSP 1 Score: 65.1 bits (157), Expect = 6.290e-10 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 0
Query: 8 RSRLPDG-TLLLVGSQGCGKSTLLDTISAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCS-ELEFEGLLQTVLRPEQLANTTAVVTVDLSRPWEAMDSVEK 115
RS+LP G +LL+G G GK++L+ I L Y YL+ D +RDD R +VW +L +GLL+ + L +T ++ VD+SRPW A+DS++K
Sbjct: 12 RSKLPSGKNVLLLGEDGAGKTSLIGKIQGIEEYKKGRGLEYLYLNVHD-----EDRDDQT-RCNVWILDGDLYHKGLLKFAVEASSLKDTLIMLVVDMSRPWTALDSLQK 115
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: A0A7M4EAE4_CROPO (Dynein light intermediate chain n=22 Tax=Archelosauria TaxID=1329799 RepID=A0A7M4EAE4_CROPO) HSP 1 Score: 65.1 bits (157), Expect = 6.320e-10 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 0
Query: 8 RSRLPDG-TLLLVGSQGCGKSTLLDTISAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCS-ELEFEGLLQTVLRPEQLANTTAVVTVDLSRPWEAMDSVEK 115
RS+LP G ++LL+G G GK++L+ I + Y YL+ D +RDD R +VW +L +GLL+ + L +T ++ VD+SRPW A+DS++K
Sbjct: 45 RSKLPSGKSVLLLGEDGAGKTSLIGKIQGIEDYKKGRGMEYLYLNVHD-----EDRDDQT-RCNVWILDGDLYHKGLLKFAMEASSLKDTLVMLVVDMSRPWTALDSLQK 148
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: A0A7M4FTT0_CROPO (Dynein light intermediate chain n=9 Tax=Archosauria TaxID=8492 RepID=A0A7M4FTT0_CROPO) HSP 1 Score: 65.1 bits (157), Expect = 6.360e-10 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 0
Query: 8 RSRLPDG-TLLLVGSQGCGKSTLLDTISAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCS-ELEFEGLLQTVLRPEQLANTTAVVTVDLSRPWEAMDSVEK 115
RS+LP G ++LL+G G GK++L+ I + Y YL+ D +RDD R +VW +L +GLL+ + L +T ++ VD+SRPW A+DS++K
Sbjct: 45 RSKLPSGKSVLLLGEDGAGKTSLIGKIQGIEDYKKGRGMEYLYLNVHD-----EDRDDQT-RCNVWILDGDLYHKGLLKFAMEASSLKDTLVMLVVDMSRPWTALDSLQK 148
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: H0YZW7_TAEGU (Dynein light intermediate chain n=98 Tax=Sauria TaxID=32561 RepID=H0YZW7_TAEGU) HSP 1 Score: 65.1 bits (157), Expect = 6.400e-10 Identity = 39/110 (35.45%), Postives = 60/110 (54.55%), Query Frame = 0
Query: 8 RSRLPDG-TLLLVGSQGCGKSTLLDTISAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCS-ELEFEGLLQTVLRPEQLANTTAVVTVDLSRPWEAMDSVEK 115
RS+LP G +LL+G G GK++L+ I + Y YL+ D +RDD R +VW +L +GLL+ + L +T ++ VD+SRPW A+DS++K
Sbjct: 68 RSKLPSGKNVLLLGEDGAGKTSLIGKIQGIEEYKKGRGMEYLYLNVHD-----EDRDDQT-RCNVWILDGDLYHKGLLKFAMEASSLKDTLVMLVVDMSRPWTALDSLQK 171
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: A0A8C8BJ14_9STRI (Dynein light intermediate chain n=1 Tax=Otus sunia TaxID=257818 RepID=A0A8C8BJ14_9STRI) HSP 1 Score: 65.1 bits (157), Expect = 6.490e-10 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 0
Query: 8 RSRLPDG-TLLLVGSQGCGKSTLLDTISAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCS-ELEFEGLLQTVLRPEQLANTTAVVTVDLSRPWEAMDSVEK 115
RS+LP G ++LL+G G GK++L+ I + Y YL+ D +RDD R +VW +L +GLL+ + L +T ++ VD+SRPW A+DS++K
Sbjct: 135 RSKLPSGKSVLLLGEDGAGKTSLIGKIQGIEEYKKGRGMEYLYLNVHD-----EDRDDQT-RCNVWILDGDLYHKGLLKFAIEANSLKDTLIMLVVDMSRPWTALDSLQK 238
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: A0A8C0FAQ0_BUBBB (Dynein light intermediate chain n=4 Tax=Neognathae TaxID=8825 RepID=A0A8C0FAQ0_BUBBB) HSP 1 Score: 65.1 bits (157), Expect = 6.570e-10 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 0
Query: 8 RSRLPDG-TLLLVGSQGCGKSTLLDTISAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCS-ELEFEGLLQTVLRPEQLANTTAVVTVDLSRPWEAMDSVEK 115
RS+LP G ++LL+G G GK++L+ I + Y YL+ D +RDD R +VW +L +GLL+ + L +T ++ VD+SRPW A+DS++K
Sbjct: 209 RSKLPSGKSVLLLGEDGAGKTSLIGKIQGIEEYKKGRGMEYLYLNVHD-----EDRDDQT-RCNVWILDGDLYHKGLLKFAIEASSLKDTLIMLVVDMSRPWTALDSLQK 312
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Match: A0A7L3XWC0_9AVES (Dynein light intermediate chain (Fragment) n=21 Tax=Aves TaxID=8782 RepID=A0A7L3XWC0_9AVES) HSP 1 Score: 64.7 bits (156), Expect = 8.590e-10 Identity = 39/110 (35.45%), Postives = 60/110 (54.55%), Query Frame = 0
Query: 8 RSRLPDG-TLLLVGSQGCGKSTLLDTISAANARGFHPVLAYSYLDATDPSEQGSERDDSPPRVSVWCCS-ELEFEGLLQTVLRPEQLANTTAVVTVDLSRPWEAMDSVEK 115
RS+LP G +LL+G G GK++L+ I + Y YL+ D +RDD R +VW +L +GLL+ + L +T ++ VD+SRPW A+DS++K
Sbjct: 12 RSKLPSGKNVLLLGEDGAGKTSLIGKIQGIEEYKKGRGMEYLYLNVHD-----EDRDDQT-RCNVWILDGDLYHKGLLKFAMEASSLKDTLIMLVVDMSRPWTALDSLQK 115 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127501.2035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig127501.2035.1 ID=prot_H-elongata_contig127501.2035.1|Name=mRNA_H-elongata_contig127501.2035.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bpback to top |