prot_H-elongata_contig127051.2008.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig127051.2008.1
Unique Name	prot_H-elongata_contig127051.2008.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	121

Homology

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BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.260e-16
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYASSE 92
            GCDVIGLQET+R G   I    Y + +SG  +G K ++  HGVG+AIKE +    G++   +ECI+ RL+  R+ I ++  VTFVV YA +E
Sbjct:   42 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 133

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BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.630e-16
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYASSE 92
            GCDVIGLQET+R G   I    Y + +SG  +G K ++  HGVG+AIKE +    G++   +ECI+ RL+  R+ I ++  VTFVV YA +E
Sbjct:   11 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 102

[Close]

BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 3.760e-16
Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYA 89
            GCDVIGLQET+R G   I    Y V +SG  +G K ++  HGVG+AIKE + + AG++   +ECI+ RL+  R+ I ++  VTFVV YA
Sbjct:  156 GCDVIGLQETRREGQGSIAHDGYVVIWSGARAGTKDKRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYA 244

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BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 4.050e-16
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYASSE 92
            GCDVIGLQET+R G   +    Y + +SG  +G K ++  HGVG+AIKE +    G+    +ECIN RL+  R+ I ++  VTFVV YA +E
Sbjct:   11 GCDVIGLQETRREGQGSLAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTE 102

[Close]

BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5KAA3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA3_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.960e-16
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYASSE 92
            GCDVIGLQET+R G   I    Y + +SG  +G K ++  HGVG+AIKE +    G++   +ECI+ RL+  R+ I ++  VTFVV YA SE
Sbjct:   11 GCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPSE 102

[Close]

BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5KTK0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK0_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 6.120e-16
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYASSE 92
            GCDVIGLQET+R G   I    Y + +SG  +G K ++  HGVG+AIKE +    G++   +ECI+ RL+  R+ I ++  VTFVV YA +E
Sbjct:   11 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 102

[Close]

BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5JM04_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM04_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 6.330e-16
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYASSE 92
            GCDVIGLQET+R G   I    Y + +SG  +G K ++  HGVG+AIKE +    G++   +ECI+ RL+  R+ I ++  VTFVV YA +E
Sbjct:   11 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 102

[Close]

BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 6.780e-16
Identity = 48/123 (39.02%), Postives = 73/123 (59.35%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYASSE--KATEG----EKAKYIAAFNSTVSSVPARE 117
            GCDVIGLQET+R G   I    Y + +SG  +G K ++  HGVG+AIKE +    G++   +ECI+ RL+  R+ I ++  VTF+V YA +E  + TEG     K  +  A ++ +  V +R+
Sbjct:  208 GCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRD 330

[Close]

BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5JUC3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC3_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 7.040e-16
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYASSE 92
            GCDVIGLQET+R G   I    Y + +SG  +G K ++  HGVG+AIKE +    G++   +ECI+ RL+  R+ I ++  VTFVV YA +E
Sbjct:  140 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 231

[Close]

BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 7.040e-16
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0

Query:    2 GCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKEEVVNKAGKDDIAIECINERLLHARISI-KSNFVTFVVAYASSE 92
            GCDVIGLQET+R G   I    Y + +SG  +G K ++  HGVG+AIKE +    G++   +ECI+ RL+  R+ I ++  VTFVV YA +E
Sbjct:   92 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 183

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot

BLAST of mRNA_H-elongata_contig127051.2008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KZE6_9PHAE	1.260e-16	45.65	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5KBZ6_9PHAE	3.630e-16	45.65	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5KDU4_9PHAE	3.760e-16	48.31	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5K259_9PHAE	4.050e-16	45.65	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5KAA3_9PHAE	4.960e-16	46.74	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KTK0_9PHAE	6.120e-16	45.65	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JM04_9PHAE	6.330e-16	45.65	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5K3Q1_9PHAE	6.780e-16	39.02	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JUC3_9PHAE	7.040e-16	45.65	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JGX2_9PHAE	7.040e-16	45.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 1..121 e-value: 9.1E-9 score: 37.4
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 3..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig127051	contig	H-elongata_contig127051:272..634 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig127051.2008.1	mRNA_H-elongata_contig127051.2008.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig127051 272..634 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig127051.2008.1 ID=prot_H-elongata_contig127051.2008.1|Name=mRNA_H-elongata_contig127051.2008.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
RGCDVIGLQETKRNGHCEITASKYRVYFSGDCSGVKGEKRQHGVGLAIKE
EVVNKAGKDDIAIECINERLLHARISIKSNFVTFVVAYASSEKATEGEKA
KYIAAFNSTVSSVPARECVFI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf