prot_H-elongata_contig125387.1903.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig125387.1903.1
Unique Nameprot_H-elongata_contig125387.1903.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length79
Homology
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Match: D7FRT2_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT2_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 7.330e-9
Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 0
Query:    5 YKDEENMTNESCIEHCRNEGNEFAGTYNKTRCRCTNREWKVSRYGLSDNCTEMCPGDVSQICGGKWAVSSW 75
            Y+DE+ +T  SCIE CR EG E AG    ++C C   +   +RYG    C   C GD  Q CGG+ + + W
Sbjct:  628 YEDEDTLTPASCIESCREEGEELAGVQGGSQCWCGTTD-DYTRYGTG-TCNFSCSGDSEQTCGGRESANVW 696          
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Match: A0A8K0EL98_BRALA (PTPRF protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EL98_BRALA)

HSP 1 Score: 57.0 bits (136), Expect = 1.260e-7
Identity = 26/75 (34.67%), Postives = 40/75 (53.33%), Query Frame = 0
Query:    4 GYKDEENMTNESCIEHCRNEGNEFAGTYNKTRCRCTNREW--KVSRYGLSDNCTEMCPGDVSQICGGKWAVSSWR 76
            G K  + MT + CIEHCR+EG  +AGT     C C N     ++ R   +  C+  C G+  + CGG W ++ ++
Sbjct: 1208 GPKISQEMTTDLCIEHCRDEGYNYAGTQYYEECWCGNERHFSRIGRQRKNKQCSTPCRGNDDEKCGGPWRLAVYK 1282          
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Match: A0A8J9ZFJ5_BRALA (PTPRF protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZFJ5_BRALA)

HSP 1 Score: 57.0 bits (136), Expect = 1.260e-7
Identity = 26/75 (34.67%), Postives = 40/75 (53.33%), Query Frame = 0
Query:    4 GYKDEENMTNESCIEHCRNEGNEFAGTYNKTRCRCTNREW--KVSRYGLSDNCTEMCPGDVSQICGGKWAVSSWR 76
            G K  + MT + CIEHCR+EG  +AGT     C C N     ++ R   +  C+  C G+  + CGG W ++ ++
Sbjct: 1208 GPKISQEMTTDLCIEHCRDEGYNYAGTQYYEECWCGNERHFSRIGRQRKNKQCSTPCRGNDDEKCGGPWRLAVYK 1282          
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Match: U9UIT6_RHIID (Uncharacterized protein n=6 Tax=Rhizophagus TaxID=1129544 RepID=U9UIT6_RHIID)

HSP 1 Score: 54.3 bits (129), Expect = 9.970e-7
Identity = 25/68 (36.76%), Postives = 37/68 (54.41%), Query Frame = 0
Query:    9 ENMTNESCIEHCRNEGNEFAGTYNKTRCRCTNREWKVSRYGLSDNCTEMCPGDVSQICGGKWAVSSWR 76
            E MT E CI +CR     +AG   + +C C N    + R   S+ C+  CPG+  Q+CGG +A+S + 
Sbjct:  193 ETMTVEECINYCREGNYRYAGLEARVQCFCGNTYNPLGRLLGSEYCSNSCPGNNYQLCGGSFALSIYE 260          
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Match: A0A8B6GN44_MYTGA (WSC domain-containing protein (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GN44_MYTGA)

HSP 1 Score: 52.4 bits (124), Expect = 3.800e-6
Identity = 23/73 (31.51%), Postives = 39/73 (53.42%), Query Frame = 0
Query:   11 MTNESCIEHCRNEGNEFAGTYNKTRCRCTNREWKVSRYGLSD------NCTEMCPGDVSQICGGKWAVSSWRT 77
            M N  C+ +C+ +G  ++GT     C C +  ++ S   + D      +C ++C  D SQICGG W +S ++T
Sbjct:   85 MENNKCLVYCKEQGYMYSGTQGGKECWCGDDPYQFSPADVPDEYQQDYDCNQVCLVDSSQICGGPWRLSVYKT 157          
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Match: A0A8J4AYG8_9CHLO (Uncharacterized protein (Fragment) n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AYG8_9CHLO)

HSP 1 Score: 51.2 bits (121), Expect = 1.350e-5
Identity = 26/74 (35.14%), Postives = 36/74 (48.65%), Query Frame = 0
Query:    5 YKDEENMTNESCIEHCRNEGNEFAGTYNKTRCRCTNREWKVSRYGLSDNCTEMCPGDVSQICGGKWAVSSWRTS 78
            Y+  + MT + C E    +G  + G    T+C   N   +    G S  C   C GD SQ+CGG W +S +RTS
Sbjct:  257 YEQSDKMTIDHCREVALAQGYIYFGVEAGTQCFGANNISRAQTNGRSAYCNWRCAGDDSQVCGGDWVISIYRTS 330          
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Match: A0A179GQT0_PURLI (WSC domain-containing protein n=1 Tax=Purpureocillium lilacinum TaxID=33203 RepID=A0A179GQT0_PURLI)

HSP 1 Score: 50.8 bits (120), Expect = 1.820e-5
Identity = 24/68 (35.29%), Postives = 34/68 (50.00%), Query Frame = 0
Query:   11 MTNESCIEHCRNEGNEFAGTYNKTRCRCTNREWKVSRYGLSDNCTEMCPGDVSQICGGKWAVSSWRTS 78
            M+N +CI+HC++ G  FAGT     C C +     +      +C   C G   Q CGG WA+S +  S
Sbjct:  546 MSNSTCIDHCKSRGYTFAGTECGKECWCGSSIRDDAVRLPDSSCGSPCQGAGGQFCGGDWAISVFTCS 613          
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Match: A0A3M7MV32_9EURO (Uncharacterized protein (Fragment) n=1 Tax=Chaetothyriales sp. CBS 135597 TaxID=2249420 RepID=A0A3M7MV32_9EURO)

HSP 1 Score: 50.4 bits (119), Expect = 2.530e-5
Identity = 24/64 (37.50%), Postives = 28/64 (43.75%), Query Frame = 0
Query:    5 YKDEENMTNESCIEHCRNEGNEFAGTYNKTRCRCTNREWKVSRYGLSDNCTEMCPGDVSQICGG 68
            Y D  N+T ESCIE C N G  +AG      C C N            +C   C G   Q+CGG
Sbjct:   67 YVDASNLTEESCIEFCDNNGFAYAGVEYSQECFCANVIGSSGSLADDSDCNMACTGSSDQLCGG 130          
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Match: A0A6A4JVI9_APOLU (Uncharacterized protein n=1 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4JVI9_APOLU)

HSP 1 Score: 49.7 bits (117), Expect = 4.710e-5
Identity = 20/63 (31.75%), Postives = 32/63 (50.79%), Query Frame = 0
Query:   11 MTNESCIEHCRNEGNEFAGTYNKTRCRCTNREWKVSRYGLSDNCTEMCPGDVSQICGGKWAVS 73
            +TN+ CI+ CR++G  +AGT     C C+N            +C   C G+ ++ CGG   +S
Sbjct:  153 LTNQQCIQFCRDKGFSYAGTQYSYECFCSNERPHFKSAANEKDCNSKCDGNANEYCGGGLKLS 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig125387.1903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FRT2_ECTSI7.330e-940.85EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A8K0EL98_BRALA1.260e-734.67PTPRF protein n=1 Tax=Branchiostoma lanceolatum Ta... [more]
A0A8J9ZFJ5_BRALA1.260e-734.67PTPRF protein n=1 Tax=Branchiostoma lanceolatum Ta... [more]
U9UIT6_RHIID9.970e-736.76Uncharacterized protein n=6 Tax=Rhizophagus TaxID=... [more]
A0A8B6GN44_MYTGA3.800e-631.51WSC domain-containing protein (Fragment) n=1 Tax=M... [more]
A0A8J4AYG8_9CHLO1.350e-535.14Uncharacterized protein (Fragment) n=2 Tax=Volvox ... [more]
A0A179GQT0_PURLI1.820e-535.29WSC domain-containing protein n=1 Tax=Purpureocill... [more]
A0A3M7MV32_9EURO2.530e-537.50Uncharacterized protein (Fragment) n=1 Tax=Chaetot... [more]
A0A6A4JVI9_APOLU4.710e-531.75Uncharacterized protein n=1 Tax=Apolygus lucorum T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 6..68
e-value: 9.3E-12
score: 45.0
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 1..78
score: 7.804
NoneNo IPR availablePANTHERPTHR24269:SF19coord: 7..75
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 7..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig125387contigH-elongata_contig125387:922..1687 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig125387.1903.1mRNA_H-elongata_contig125387.1903.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig125387 904..1692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig125387.1903.1 ID=prot_H-elongata_contig125387.1903.1|Name=mRNA_H-elongata_contig125387.1903.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp
MSWGYKDEENMTNESCIEHCRNEGNEFAGTYNKTRCRCTNREWKVSRYGL
SDNCTEMCPGDVSQICGGKWAVSSWRTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd