prot_H-elongata_contig124579.1849.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig124579.1849.1
Unique Nameprot_H-elongata_contig124579.1849.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
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BLAST of mRNA_H-elongata_contig124579.1849.1 vs. uniprot
Match: D7G574_ECTSI (RME-8_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G574_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 2.420e-66
Identity = 118/159 (74.21%), Postives = 126/159 (79.25%), Query Frame = 0 
Query:    1 MTLRVGPTSLDRVDGERLQNKVSYLPLLSVEKVYFFTDDATQMLVGCYGGRRRRYWCAARDSLVRAMEDHLRHIGRTGDQPLPVERVGTWE--------ESRKR--------------ETGIYFRVLALRKSSVVEMDIVTRDHLREFPLDMIFNIVYH 137
            MTLRVGPTSLDRVDGERLQ++VS LPLLSVEKVY FTDDATQMLV C+GGRRRRYWCAARDSLVRAMEDHLRH+GRTGDQPLPVERVGTWE        ES K+              E     R+LAL KSSVVEMD+ TRDHLREFPL+MIFNIVYH
Sbjct:  191 MTLRVGPTSLDRVDGERLQHRVSSLPLLSVEKVYLFTDDATQMLVDCHGGRRRRYWCAARDSLVRAMEDHLRHLGRTGDQPLPVERVGTWEVDTSTRNPESVKQGYLFEVPVQKWSRTERAFKSRLLALTKSSVVEMDVATRDHLREFPLEMIFNIVYH 349
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124579.1849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G574_ECTSI2.420e-6674.21RME-8_N domain-containing protein n=2 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124579contigH-elongata_contig124579:992..1425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124579.1849.1mRNA_H-elongata_contig124579.1849.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig124579 992..1431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig124579.1849.1 ID=prot_H-elongata_contig124579.1849.1|Name=mRNA_H-elongata_contig124579.1849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
MTLRVGPTSLDRVDGERLQNKVSYLPLLSVEKVYFFTDDATQMLVGCYGG
RRRRYWCAARDSLVRAMEDHLRHIGRTGDQPLPVERVGTWEESRKRETGI
YFRVLALRKSSVVEMDIVTRDHLREFPLDMIFNIVYHPT
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