prot_H-elongata_contig123627.1782.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig123627.1782.1
Unique Nameprot_H-elongata_contig123627.1782.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 4.030e-25
Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 0
Query:    1 MGRGQVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRRL 62
            MGRGQ+E++TL KVGHLVE+LQ RDIK A  +QQGLA+SAW +HKDWLKGLKYLTTLVSRRL
Sbjct: 1226 MGRGQLEQETLAKVGHLVESLQARDIKRAGAVQQGLANSAWASHKDWLKGLKYLTTLVSRRL 1287          
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: D8LBR5_ECTSI (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.910e-24
Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 MGRGQVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRRL 62
            MGRGQVE++TL KVG LVE+LQ RDIK A  +QQGLA+SAW +HKDWLKGLKYLTTLVSRRL
Sbjct:  880 MGRGQVEQETLAKVGQLVESLQARDIKRAGAVQQGLANSAWASHKDWLKGLKYLTTLVSRRL 941          
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: A0A7S0C0D8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0D8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 8.650e-11
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 MGRGQVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRRL 62
            + RG ++ D + KV  LV A + R+   A  IQ+ L DS W +HKDWLKGLK+L  L  ++L
Sbjct:   77 LSRGAIDPDVVAKVQQLVVAAESRNYVAAGGIQKSLVDSVWSDHKDWLKGLKFLIQLAMKKL 138          
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: A0A7S1ZFT1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFT1_TRICV)

HSP 1 Score: 64.7 bits (156), Expect = 1.130e-10
Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    1 MGRGQVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRRL 62
            + RGQ++  T  + G LV ALQ RD + A   Q  L +S W++HKDWLKG+K+L  L  ++L
Sbjct:  304 LSRGQIDPTTAGQTGQLVLALQGRDYRSAGAAQSALVNSVWRDHKDWLKGMKFLIQLAGKKL 365          
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: K0S465_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S465_THAOC)

HSP 1 Score: 62.0 bits (149), Expect = 4.610e-10
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    1 MGRGQVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRR 61
            +  G+V+ D   KVG +V +LQ RD   A++I  GL  + W++HKDWLKGLK+L  L  ++
Sbjct:  159 LAMGRVDADVADKVGSVVRSLQGRDYATASSIVTGLVSNHWKDHKDWLKGLKFLVQLAGKK 219          
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: A0A7S4VZF3_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VZF3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.340e-8
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 MGRGQVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRRL 62
            + RG ++ +   KV  +V A+Q RD   A  IQ+ L +S W+ HKDWL+G+K+L    S+R+
Sbjct:  990 LARGDIDSEIAPKVMTMVTAMQNRDYGSAAAIQKALVNSDWKEHKDWLRGIKFLIQFASKRI 1051          
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: A0A7S2QVW0_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVW0_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.100e-7
Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    6 VERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRRL 62
            +++DT TK+  LV ALQ RD   A ++   LA++ W+ HKD+LKG+KYL  L  ++L
Sbjct:  264 IDQDTGTKLQTLVAALQNRDYATAGSMSTVLANTVWKQHKDFLKGIKYLIQLAGKKL 320          
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: A0A482RQQ0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQQ0_9ARCH)

HSP 1 Score: 52.0 bits (123), Expect = 3.180e-7
Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    5 QVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRR 61
            +V+   L K+G  +E +  R+   A+ +Q  LA++AW  HK+W+KGLK L  L SR+
Sbjct:   30 EVDGGVLAKLGVFMEHMANRNFPGASAVQTDLANTAWSEHKEWVKGLKNLIQLASRK 86          
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: A0A7R9WWV0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WWV0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 5.870e-7
Identity = 24/61 (39.34%), Postives = 35/61 (57.38%), Query Frame = 0
Query:    1 MGRGQVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRR 61
            + RG V  D   K+  +   +Q  D K A  IQ GL ++ W+ HKDWLKG+K L  L +++
Sbjct:  142 LARGDVPEDVAGKMMTMTTTIQTYDWKNAQAIQTGLVNTDWKEHKDWLKGIKALLQLSTKK 202          
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Match: A0A7S2VYN5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYN5_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.040e-6
Identity = 22/62 (35.48%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    1 MGRGQVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKGLKYLTTLVSRRL 62
            + RG +    +++V +L   LQ RD + AN I   L ++ W++ KDWL+G++ L  L SR++
Sbjct:  307 LARGDIGSHIVSQVSNLFAGLQNRDYQAANAIHNSLVNTEWKDQKDWLRGMRVLIQLASRKM 368          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123627.1782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KCD9_9PHAE4.030e-2579.03WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LBR5_ECTSI1.910e-2479.03Vesicle coat complex COPII, subunit SEC31 n=1 Tax=... [more]
A0A7S0C0D8_9STRA8.650e-1145.16Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1ZFT1_TRICV1.130e-1045.16Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
K0S465_THAOC4.610e-1044.26Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4VZF3_9STRA1.340e-840.32Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S2QVW0_9STRA1.100e-745.61Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A482RQQ0_9ARCH3.180e-740.35Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7R9WWV0_9STRA5.870e-739.34Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2VYN5_9STRA1.040e-635.48Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig123627contigH-elongata_contig123627:271..671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig123627.1782.1mRNA_H-elongata_contig123627.1782.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig123627 160..1847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig123627.1782.1 ID=prot_H-elongata_contig123627.1782.1|Name=mRNA_H-elongata_contig123627.1782.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
MGRGQVERDTLTKVGHLVEALQMRDIKEANTIQQGLADSAWQNHKDWLKG
LKYLTTLVSRRL*
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