prot_H-elongata_contig99014.17246.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99014.17246.1
Unique Nameprot_H-elongata_contig99014.17246.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 2.050e-35
Identity = 68/83 (81.93%), Postives = 72/83 (86.75%), Query Frame = 0
Query:    1 MGAWAEDAVARCVCVLALDRFGDYSSRMVAPVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA 83
            M AWAEDAVARCVCVLALDRFGDYSSRMVAPVRETAAQLLAVAALQL++  LRQ A LL ELT + EWQ RHGGFC  +SLCA
Sbjct:  375 MAAWAEDAVARCVCVLALDRFGDYSSRMVAPVRETAAQLLAVAALQLEADKLRQAARLLFELTASGEWQARHGGFCSLESLCA 457          
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: A0A6H5J7D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7D4_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 6.290e-17
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 0
Query:   28 MVAPVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA 83
            MVAPVRETAAQLLAVAALQL++  LRQ A LL ELT + EWQ RHGGFC  +SLCA
Sbjct:    1 MVAPVRETAAQLLAVAALQLEADKLRQAARLLFELTASGEWQARHGGFCSLESLCA 56          
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: D8TVL8_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TVL8_VOLCA)

HSP 1 Score: 82.8 bits (203), Expect = 8.140e-17
Identity = 42/81 (51.85%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    4 WAEDAVARCVCVLALDRFGDYSSRMV-APVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA 83
            W ED +   +CVLALDRFGDY S  V APVRETAAQ L  A   LD G +R  A +L +L    +W+ R+GGFCG   + A
Sbjct:   52 WLEDCIVHLLCVLALDRFGDYGSDQVTAPVRETAAQALGTALTALDPGSVRAVAAMLRDLQGQNDWRVRYGGFCGLKYMLA 132          
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: A0A8J4FNQ9_9CHLO (DUF3535 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FNQ9_9CHLO)

HSP 1 Score: 83.2 bits (204), Expect = 8.870e-17
Identity = 43/81 (53.09%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    4 WAEDAVARCVCVLALDRFGDYSSRMV-APVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA 83
            W ED +   +CVLALDRFGDY S  V APVRETAAQ L +A   LDS  +R  A +L EL    +W+ R+GGFCG   + A
Sbjct:  135 WLEDCIVHLLCVLALDRFGDYGSDQVTAPVRETAAQALGMALTALDSVSVRTVAAMLQELQGQNDWRVRYGGFCGLKYMLA 215          
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: A0A6J2JYY0_BOMMA (TATA-binding protein-associated factor 172 n=5 Tax=Bombyx TaxID=7090 RepID=A0A6J2JYY0_BOMMA)

HSP 1 Score: 82.8 bits (203), Expect = 1.220e-16
Identity = 43/81 (53.09%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    4 WAEDAVARCVCVLALDRFGDY-SSRMVAPVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA 83
            W ED   R +CVLALDRFGD+ S ++VAPVRET AQ L VA  QLD   +R+ A LLS L    +W+ RHG   GF  + A
Sbjct:  330 WLEDMALRLLCVLALDRFGDFVSDQVVAPVRETCAQTLGVALAQLDEARVRKVAGLLSSLAAQAQWEARHGALLGFKYMLA 410          
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: A0A061QWC4_9CHLO (Tata-binding protein-associated factor 172 (Fragment) n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QWC4_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 1.520e-16
Identity = 45/82 (54.88%), Postives = 52/82 (63.41%), Query Frame = 0
Query:    3 AWAEDAVARCVCVLALDRFGDY-SSRMVAPVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA 83
            AW +D V R VCVLALDRFGDY S ++V PVRETAAQ L  AA  L    L+    +L +LT  EEWQ RHG   G+  L A
Sbjct:  199 AWLQDCVVRLVCVLALDRFGDYVSDQVVMPVRETAAQALGAAATALPGTSLQAVVRMLQQLTGREEWQVRHGCMVGWKYLLA 280          
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: A0A835XVG1_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XVG1_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 2.290e-16
Identity = 42/75 (56.00%), Postives = 52/75 (69.33%), Query Frame = 0
Query:    4 WAEDAVARCVCVLALDRFGDYSSRMV-APVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCG 77
            W ED  A  +CVLALDRFGDY S  V APVRETAAQ L +A + LD   + + A +L+EL V  +W+ R+GGFCG
Sbjct:  375 WLEDCCAHLLCVLALDRFGDYGSDQVTAPVRETAAQALGMALVALDPLSVARVASMLAELQVQPDWRVRYGGFCG 449          
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: A0A8J4BAT6_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BAT6_9CHLO)

HSP 1 Score: 81.6 bits (200), Expect = 3.050e-16
Identity = 43/81 (53.09%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    4 WAEDAVARCVCVLALDRFGDYSSRMV-APVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA 83
            W ED V   +CVLALDRFGDY S  V APVRETAAQ L +A   LD+  +R  A +L EL    +W+ R+GGFCG   + A
Sbjct:  414 WLEDCVVHLLCVLALDRFGDYGSDQVTAPVRETAAQALGMALTTLDAISVRTVAAMLRELQGQNDWRVRYGGFCGLKYMLA 494          
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: A0A8J4BB21_9CHLO (Uncharacterized protein n=6 Tax=Volvox TaxID=3066 RepID=A0A8J4BB21_9CHLO)

HSP 1 Score: 81.6 bits (200), Expect = 3.130e-16
Identity = 43/81 (53.09%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    4 WAEDAVARCVCVLALDRFGDYSSRMV-APVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA 83
            W ED V   +CVLALDRFGDY S  V APVRETAAQ L +A   LD+  +R  A +L EL    +W+ R+GGFCG   + A
Sbjct:  404 WLEDCVVHLLCVLALDRFGDYGSDQVTAPVRETAAQALGMALTTLDAISVRTVAAMLRELQGQNDWRVRYGGFCGLKYMLA 484          
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Match: A0A2H1VKQ2_SPOFR (SFRICE_016570 (Fragment) n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1VKQ2_SPOFR)

HSP 1 Score: 80.5 bits (197), Expect = 7.870e-16
Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 0
Query:    4 WAEDAVARCVCVLALDRFGDY-SSRMVAPVRETAAQLLAVAALQLDSGGLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA 83
            W ED   R +CVLALDRFGD+ S ++VAPVRET AQ L VA  QL +  +R+ A LL+ L+   +W+ RHG   GF  L A
Sbjct:   13 WLEDMALRLLCVLALDRFGDFVSDQVVAPVRETCAQTLGVALAQLGAARVRKVAALLASLSAHAQWEARHGALLGFKYLLA 93          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99014.17246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBB5_ECTSI2.050e-3581.93Essential abundant protein involved in regulation ... [more]
A0A6H5J7D4_9PHAE6.290e-1775.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8TVL8_VOLCA8.140e-1751.85Uncharacterized protein (Fragment) n=1 Tax=Volvox ... [more]
A0A8J4FNQ9_9CHLO8.870e-1753.09DUF3535 domain-containing protein n=1 Tax=Volvox r... [more]
A0A6J2JYY0_BOMMA1.220e-1653.09TATA-binding protein-associated factor 172 n=5 Tax... [more]
A0A061QWC4_9CHLO1.520e-1654.88Tata-binding protein-associated factor 172 (Fragme... [more]
A0A835XVG1_9CHLO2.290e-1656.00Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A8J4BAT6_9CHLO3.050e-1653.09Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A8J4BB21_9CHLO3.130e-1653.09Uncharacterized protein n=6 Tax=Volvox TaxID=3066 ... [more]
A0A2H1VKQ2_SPOFR7.870e-1651.85SFRICE_016570 (Fragment) n=1 Tax=Spodoptera frugip... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36498FAMILY NOT NAMEDcoord: 3..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99014contigH-elongata_contig99014:1089..1498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99014.17246.1mRNA_H-elongata_contig99014.17246.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99014 1089..1498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99014.17246.1 ID=prot_H-elongata_contig99014.17246.1|Name=mRNA_H-elongata_contig99014.17246.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MGAWAEDAVARCVCVLALDRFGDYSSRMVAPVRETAAQLLAVAALQLDSG
GLRQTAELLSELTVAEEWQPRHGGFCGFDSLCA
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