prot_H-elongata_contig98966.17243.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig98966.17243.1
Unique Name	prot_H-elongata_contig98966.17243.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	70

Homology

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BLAST of mRNA_H-elongata_contig98966.17243.1 vs. uniprot
Match: D8LET4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LET4_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 8.970e-12
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 0

Query:    1 MLSDVPHDTTATS------GFAVQAIALVIGLGLFPIYLDVMYYTTPETIEEGTF-SCTAPWIKQE-DLESAERKVET 70
            +LS V   +T+T+      GFA QA+A V+GLGLFP+YLD MYYTTPETI++  F    + W K + D+E  ERKVE+
Sbjct:  295 VLSQVTMSSTSTNIVDRYAGFAAQAVAYVVGLGLFPMYLDAMYYTTPETIDQNDFCGDVSAWSKGKGDIE--ERKVES 370

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig98966.17243.1 vs. uniprot

BLAST of mRNA_H-elongata_contig98966.17243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LET4_ECTSI	8.970e-12	51.28	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..70
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..14
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 15..33
None	No IPR available	TMHMM	TMhelix		coord: 15..33

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig98966	contig	H-elongata_contig98966:198..1061 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig98966.17243.1	mRNA_H-elongata_contig98966.17243.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig98966 174..1061 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig98966.17243.1 ID=prot_H-elongata_contig98966.17243.1|Name=mRNA_H-elongata_contig98966.17243.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
MLSDVPHDTTATSGFAVQAIALVIGLGLFPIYLDVMYYTTPETIEEGTFS
CTAPWIKQEDLESAERKVET