prot_H-elongata_contig9875.17214.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9875.17214.1
Unique Nameprot_H-elongata_contig9875.17214.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length510
Homology
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A6H5K3X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X8_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 7.430e-131
Identity = 249/501 (49.70%), Postives = 291/501 (58.08%), Query Frame = 0
Query:   17 GGVSVVGDGEYVANGGPMLVACGQGQSMYDVKGCLSSWVLVGGSNSRELRAEGNLMGKSGRGEGGWGGEYGXXXXGGNSCDKPCHAGRPGVGSDSWALRSNCTAAGDGGVMCCACVPFEGWNKSLGPRMFITGGKDSVLREWEMVEGRPSLSAEIAGHTDWISCCSLIPSTSSGLPPTVAVXXXXXXSLRIWSKSAAHVNYPTGATKRNSSRYGKEYSTRGGGGSKGFGVVGTGGWLLASSLSNAHGSSEFVTCSACPSGKSSAAAGWVATGGSDWTVRLWDVAKALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIWDPRNWRSPVATLLGEPSHGASTAA-GGLAGLSLGG------GGHLLAG-AEARFRGESGRWEGDTTGATMLKSVNCLSAGRTGDGVEWLFGAGETTIRAWRTMDGMWHGGDALPGGDMRGVASMSVLE 509
            GG   + DG+YVA+GGP+LVACGQG+SMY VKGC+SSWVLVG                                                  + SWALRS    AGDGGVMC ACVP     +S G    ITGGKDSVLREWE+ EGRP L A I+GHTDWIS                  XXXXXX      KSAA                                      W LASS++ AHGSSEFVT           AAGWVATGG+DW+VRLWDV K+ ELGRLSF GHS  V SLA S+DGN+LVSGG+D+K +VWSP+SRR VATL+ H S V+GV VD GT SG  PRW+A+GGGEGFL +WDPRN+ SPVATL GE +  ++ AA   L+G    G       G L  G A AR RGESGRWEG+T GATML +VNCL+AG  G   +WLF AGET +R+WR  DG+WHGG  LPG  + G+AS+SV+E
Sbjct:  192 GGSLPMKDGDYVADGGPVLVACGQGKSMYKVKGCISSWVLVGXXXXXXXXXXXXXXXXX------------------XXXXXXXXXXXXAPSNQSWALRSEDNPAGDGGVMCSACVPSIASGQSSGT--LITGGKDSVLREWEIAEGRPRLVAHISGHTDWISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WSLASSVATAHGSSEFVTXXXXXXXXXXXAAGWVATGGTDWSVRLWDVVKSRELGRLSFMGHSHQVRSLACSSDGNLLVSGGDDHKVIVWSPQSRRVVATLKSHASAVHGVAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVATLRGEVAAASAAAAPSSLSGAFSSGVSVVEREGSLQGGLAGARSRGESGRWEGETAGATMLNAVNCLAAGGAGSCGDWLFAAGETVVRSWRRRDGIWHGGAGLPGEGLGGIASLSVIE 671          
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: D7G1I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I6_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 1.180e-120
Identity = 231/515 (44.85%), Postives = 288/515 (55.92%), Query Frame = 0
Query:   24 DGEYVANGGPMLVACGQGQSMYDVKGCLSSWVLVGGSNSRELRAEGNLMGKSGRGEGGWGGEYGXXXXGGNSCDKPCHAGRPGVGSDSWALRSNCTAAGDGGVMCCACVPFEGWNKSLGPRMFITGGKDSVLREWEMVEGRPSLSAEIAGHTDWISCCSLIPSTSSGLPPTVAVXXXXXXSLRIWSKS------AAHVNYPTGATKRNSSRYGKEYSTRG----GGGSKGFGVVGTGGWLLASSLSNAHGSSEFVTCSACPSGKSSAA-------------AGWVATGGSDWTVRLWDVAKALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIWDPRNWRSPVATLLGE-----PSHGASTAAGGLAGLSLGGGGHLLAG-AEARFRGESGRWEGDTTGATMLKSVNCLSAGRTGDGVEWLFGAGETTIRAWRTMDGMWHGGDALPGGDMRGVASMSVLE 509
            DG+YVA+GGP+LVACGQG+SMY+VKGC+SSWVLVGG                       GGE                  +P    +  A                         ++ G    ITGGKDSVLREWE+ EGRP L A I+GHTDWISCC+L+PS ++G+ P+VAV      S+R W KS      AA     + A  + S++  ++ S R     G  S     +G+G                                             GWVATGG+DW+VRLWDV K  ELGRLSF GHS  V SLA S+DG +LVSGG+D+K +VWSP+SRR +ATL+ H S V+GV VD GT SG  PRW+A+GGGEGFL +WDPRN+ SPVA L GE     PS  +   + G++     GG  L  G A AR RGESGRWEG+TTGATML +VNCL+AG  G G +WLF AGET +R+WR  DG+WHGG  LPG  + G+AS+SV+E
Sbjct:   60 DGDYVADGGPVLVACGQGKSMYNVKGCMSSWVLVGGG----------------------GGE------------------QPDAVKEKMATXXXXXXX----------XXXXXXXQASGT--LITGGKDSVLREWEIAEGRPRLVAHISGHTDWISCCALVPSATAGVAPSVAVSGGRDASVRFWHKSDAAAAEAAAARAASDALAKESAQGKRKSSLRAAFASGSRSSSGRDLGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGWVATGGTDWSVRLWDVVKFRELGRLSFMGHSHPVRSLACSSDGKLLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGVAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVAILRGEVTAADPSSLSEAFSSGMSVAEREGG--LQGGLAGARSRGESGRWEGETTGATMLNAVNCLAAGGAGSGGDWLFAAGETVVRSWRRRDGVWHGGAGLPGEGLGGIASLSVIE 520          
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A317XLY9_9BASI (WD40 repeat-like protein n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XLY9_9BASI)

HSP 1 Score: 63.5 bits (153), Expect = 6.000e-7
Identity = 48/143 (33.57%), Postives = 70/143 (48.95%), Query Frame = 0
Query:  283 GWVATGGSDWTVRLWDVAKALELGRLSF-------RGHSRHVTSLAASA-DGNVLVSGGEDNKAVVWSPKS------RRAVATLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIWDPRNWRSPVATLLGEPSHGAST 411
            G  ATGGSD TVRLWDVA ++  G +         RG+   VT++  S  DG  + + G D     W  +S      R +V +    E+  + + V     +    R     GG+G + +WD R++R+PV+TL G PS  A T
Sbjct:  280 GVFATGGSDSTVRLWDVA-SMARGHIDIIVLKSKVRGNRTRVTAMQYSPLDGKRIYAAGWDGSLSFWDTRSNLHAKPRGSVDSAHEPETITSSIAVHPAKDNVFASR-----GGDGTVKLWDARSFRAPVSTLAGLPSSSAHT 416          
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: UPI00146F9869 (WD40 repeat domain-containing protein n=1 Tax=Pseudonocardia spinosispora TaxID=103441 RepID=UPI00146F9869)

HSP 1 Score: 60.8 bits (146), Expect = 1.680e-6
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 0
Query:  287 TGGSDWTVRLWDVAKALELGRLSFRGHSR--HVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTV 359
            +G SD TVR+WD+   L L RL   G  R   + ++A SAD  ++V+GG+D  A VW+ +     ATL GH+  V
Sbjct:  204 SGSSDGTVRIWDITTGLALRRLQAHGVGRVGKIRTMAFSADHEIMVTGGQDRTARVWTSQKMNPHATLSGHDDVV 278          
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A8H7ER42_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7ER42_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 1.980e-6
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 0
Query:  287 TGGSDWTVRLWDVA--KALELGRL-SFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTG 369
            TGG+D  V +W +   K  +   L S RGHS  VTS+ +S   ++LVSG ED  A+VW     + V TL GHES+V+ V ++  TG
Sbjct: 2807 TGGTDNVVCMWKIKQDKNTDFTLLESLRGHSAPVTSITSSRSYSILVSGSEDKTAIVWDLNRMQYVRTLNGHESSVDIVRINDTTG 2892          
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A1X0R0E3_RHIZD (Beach-domain-containing protein n=2 Tax=Rhizopus microsporus TaxID=58291 RepID=A0A1X0R0E3_RHIZD)

HSP 1 Score: 62.0 bits (149), Expect = 2.390e-6
Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 0
Query:  287 TGGSDWTVRLWDVAKALELGRL---SFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTG-----SGHTPR-WVATG 380
            TGG+D  V +W V     L  +   S +GH+  VT++ AS   +V+V+G ED  A++W   +++ V +L+GHES+V  + ++  TG     SG+T R W   G
Sbjct: 1446 TGGTDSLVCIWKVKNQKNLEFVLSESLKGHTDVVTTITASRQYSVVVTGSEDKTAIIWDLNTKKYVNSLRGHESSVQHIAINHTTGDIMTCSGNTIRLWTING 1548          
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A2G4T262_RHIZD (Beach-domain-containing protein n=1 Tax=Rhizopus microsporus ATCC 52813 TaxID=1340429 RepID=A0A2G4T262_RHIZD)

HSP 1 Score: 62.0 bits (149), Expect = 2.560e-6
Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 0
Query:  287 TGGSDWTVRLWDVAKALELGRL---SFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTG-----SGHTPR-WVATG 380
            TGG+D  V +W V     L  +   S +GH+  VT++ AS   +V+V+G ED  A++W   +++ V +L+GHES+V  + ++  TG     SG+T R W   G
Sbjct: 2269 TGGTDSLVCIWKVKNQKNLEFVLSESLKGHTDVVTTITASRQYSVVVTGSEDKTAIIWDLNTKKYVNSLRGHESSVQHIAINHTTGDIMTCSGNTIRLWTING 2371          
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A2G5BCR3_COERN (PFU-domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BCR3_COERN)

HSP 1 Score: 60.1 bits (144), Expect = 7.750e-6
Identity = 42/102 (41.18%), Postives = 54/102 (52.94%), Query Frame = 0
Query:  263 GSSEFVTCSACPSGKSSAAAGWVATGGSDWTVRLWDVAKALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLV 364
            G S +VT  A     +    G +ATGG+D  + +WD A+ L        GH  +V +LAAS DGNVLVSG  D  A VW+    +   TL GH + V  VLV
Sbjct:   55 GHSGYVTSVAIVPSTAEHPHGQIATGGADGRICVWD-AEDLAAPTAVLEGHKDNVCALAASTDGNVLVSGSWDGTARVWT--DGKCTHTLTGHAAAVWDVLV 153          
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A7S0SYZ2_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SYZ2_9CHLO)

HSP 1 Score: 55.5 bits (132), Expect = 2.860e-5
Identity = 39/89 (43.82%), Postives = 48/89 (53.93%), Query Frame = 0
Query:  261 AHGSSEFVTCSACPSGKSSAAAGWVATGGSDWTVRLWDVAKALELGRL--SFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRR 347
            AHG  +  TC+A  S       G +ATG  D  ++LWD     E GRL     GH + V SLA SADG  LVSGGED   +VW   +R+
Sbjct:  112 AHG--QECTCAALSS------EGVLATGSKDQRIKLWD----FETGRLLAEEHGHCKSVLSLAFSADGRTLVSGGEDAVVMVWRVDARK 188          
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A4U0X3P1_9PEZI (Uncharacterized protein n=2 Tax=Cryomyces minteri TaxID=331657 RepID=A0A4U0X3P1_9PEZI)

HSP 1 Score: 58.5 bits (140), Expect = 2.860e-5
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 0
Query:  265 SEFVTCSACPSGKSSAAAGWVATGGSDWTVRLWD---VAKALELGRLSFRGHSRHVTSL-AASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQ 366
            S++V C A PS    A A W+A+GG D  + LWD   V K LE+      G  R   S+ A +A  ++L SGG ++   VW P++ + V    GH   +  VL+++
Sbjct:  700 SDYVKCLASPS----AHASWIASGGLDRKICLWDLNGVGKKLEIAVAEDEGIYRDKGSVYALAATNSILASGGPESIVRVWDPRTGKRVTKFVGHTDNIRDVLINE 801          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5K3X8_9PHAE7.430e-13149.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1I6_ECTSI1.180e-12044.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A317XLY9_9BASI6.000e-733.57WD40 repeat-like protein n=1 Tax=Testicularia cype... [more]
UPI00146F98691.680e-641.33WD40 repeat domain-containing protein n=1 Tax=Pseu... [more]
A0A8H7ER42_9FUNG1.980e-643.02Uncharacterized protein n=1 Tax=Apophysomyces ossi... [more]
A0A1X0R0E3_RHIZD2.390e-635.92Beach-domain-containing protein n=2 Tax=Rhizopus m... [more]
A0A2G4T262_RHIZD2.560e-635.92Beach-domain-containing protein n=1 Tax=Rhizopus m... [more]
A0A2G5BCR3_COERN7.750e-641.18PFU-domain-containing protein n=1 Tax=Coemansia re... [more]
A0A7S0SYZ2_9CHLO2.860e-543.82Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A4U0X3P1_9PEZI2.860e-534.91Uncharacterized protein n=2 Tax=Cryomyces minteri ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 196..210
score: 32.41
coord: 329..343
score: 31.85
coord: 285..299
score: 39.87
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 111..159
e-value: 1.5
score: 15.8
coord: 345..390
e-value: 7.7E-5
score: 32.1
coord: 164..209
e-value: 9.1E-7
score: 38.5
coord: 303..342
e-value: 9.7E-5
score: 31.8
coord: 251..298
e-value: 1.1
score: 16.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 261..298
e-value: 0.02
score: 15.8
coord: 171..209
e-value: 0.0045
score: 17.8
coord: 309..342
e-value: 4.1E-5
score: 24.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 310..351
score: 14.519
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 171..209
score: 8.57
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 285..299
score: 8.637
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 108..236
e-value: 5.0E-11
score: 43.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 253..489
e-value: 4.2E-27
score: 96.8
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 144..403
coord: 283..403
NoneNo IPR availablePANTHERPTHR19848:SF4E3 UBIQUITIN-PROTEIN LIGASE TRAF7coord: 144..403
coord: 283..403
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 285..299
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 144..218
score: 10.522
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 285..399
score: 21.252
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 122..406

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9875contigH-elongata_contig9875:2691..6629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9875.17214.1mRNA_H-elongata_contig9875.17214.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9875 1948..6856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9875.17214.1 ID=prot_H-elongata_contig9875.17214.1|Name=mRNA_H-elongata_contig9875.17214.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=510bp
MPIPSAGVQTTGEHIHGGVSVVGDGEYVANGGPMLVACGQGQSMYDVKGC
LSSWVLVGGSNSRELRAEGNLMGKSGRGEGGWGGEYGGSGGGGNSCDKPC
HAGRPGVGSDSWALRSNCTAAGDGGVMCCACVPFEGWNKSLGPRMFITGG
KDSVLREWEMVEGRPSLSAEIAGHTDWISCCSLIPSTSSGLPPTVAVSGG
RDGSLRIWSKSAAHVNYPTGATKRNSSRYGKEYSTRGGGGSKGFGVVGTG
GWLLASSLSNAHGSSEFVTCSACPSGKSSAAAGWVATGGSDWTVRLWDVA
KALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVA
TLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIWDPRNWRSPVAT
LLGEPSHGASTAAGGLAGLSLGGGGHLLAGAEARFRGESGRWEGDTTGAT
MLKSVNCLSAGRTGDGVEWLFGAGETTIRAWRTMDGMWHGGDALPGGDMR
GVASMSVLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf