mRNA_H-elongata_contig9875.17214.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig9875.17214.1
Unique NamemRNA_H-elongata_contig9875.17214.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A6H5K3X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X8_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 3.480e-134
Identity = 264/546 (48.35%), Postives = 311/546 (56.96%), Query Frame = 3 
Query:  141 IIEKTGNFNLPGCGQATGTGGTRFIETGSMPIPSAGVQTTGEHIHGGVSVVGDGEYVANGGPMLVACGQGQSMYDVKGCLSSWVLVGGSNSRELRAEGNLMGKSGRGEGGWGGEYGXXXXGGNSCDKPCHAGRPGVGSDSWALRSNCTAAGDGGVMCCACVPFEGWNKSLGPRMFITGGKDSVLREWEMVEGRPSLSAEIAGHTDWISCCSLIPSTSSGLPPTVAVXXXXXXSLRIWSKSAAHVNYPTGATKRNSSRYGKEYSTRGGGGSKGFGVVGTGGWLLASSLSNAHGSSEFVTCSACPSGKSSAAAGWVATGGSDWTVRLWDVAKALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIWDPRNWRSPVATLLGEPSHGASTAA-GGLAGLSLGG------GGHLLAG-AEARFRGESGRWEGDTTGATMLKSVNCLSAGRTGDGVEWLFGAGETTIRAWRTMDGMWHGGDALPGGDMRGVASMSVLE 1754
            ++  TG  N+PGCG A+ TGG RF E       +A          GG   + DG+YVA+GGP+LVACGQG+SMY VKGC+SSWVLVG                                                  + SWALRS    AGDGGVMC ACVP     +S G    ITGGKDSVLREWE+ EGRP L A I+GHTDWIS                  XXXXXX      KSAA                                      W LASS++ AHGSSEFVT           AAGWVATGG+DW+VRLWDV K+ ELGRLSF GHS  V SLA S+DGN+LVSGG+D+K +VWSP+SRR VATL+ H S V+GV VD GT SG  PRW+A+GGGEGFL +WDPRN+ SPVATL GE +  ++ AA   L+G    G       G L  G A AR RGESGRWEG+T GATML +VNCL+AG  G   +WLF AGET +R+WR  DG+WHGG  LPG  + G+AS+SV+E
Sbjct:  147 VMTHTGMHNVPGCGIASSTGGRRFGEGAPATTAAARGAPFALEGGGGSLPMKDGDYVADGGPVLVACGQGKSMYKVKGCISSWVLVGXXXXXXXXXXXXXXXXX------------------XXXXXXXXXXXXAPSNQSWALRSEDNPAGDGGVMCSACVPSIASGQSSGT--LITGGKDSVLREWEIAEGRPRLVAHISGHTDWISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WSLASSVATAHGSSEFVTXXXXXXXXXXXAAGWVATGGTDWSVRLWDVVKSRELGRLSFMGHSHQVRSLACSSDGNLLVSGGDDHKVIVWSPQSRRVVATLKSHASAVHGVAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVATLRGEVAAASAAAAPSSLSGAFSSGVSVVEREGSLQGGLAGARSRGESGRWEGETAGATMLNAVNCLAAGGAGSCGDWLFAAGETVVRSWRRRDGIWHGGAGLPGEGLGGIASLSVIE 671
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BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: D7G1I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I6_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 2.230e-122
Identity = 247/572 (43.18%), Postives = 309/572 (54.02%), Query Frame = 3 
Query:  141 IIEKTGNFNLPGCGQATGTGGTRFIE-----TGSMPIPSAGVQTTGEHIHGGVSVVGDGEYVANGGPMLVACGQGQSMYDVKGCLSSWVLVGGSNSRELRAEGNLMGKSGRGEGGWGGEYGXXXXGGNSCDKPCHAGRPGVGSDSWALRSNCTAAGDGGVMCCACVPFEGWNKSLGPRMFITGGKDSVLREWEMVEGRPSLSAEIAGHTDWISCCSLIPSTSSGLPPTVAVXXXXXXSLRIWSKS------AAHVNYPTGATKRNSSRYGKEYSTRG----GGGSKGFGVVGTGGWLLASSLSNAHGSSEFVTCSACPSGKSSAA-------------AGWVATGGSDWTVRLWDVAKALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIWDPRNWRSPVATLLGE-----PSHGASTAAGGLAGLSLGGGGHLLAG-AEARFRGESGRWEGDTTGATMLKSVNCLSAGRTGDGVEWLFGAGETTIRAWRTMDGMWHGGDALPGGDMRGVASMSVLE 1754
            ++  TG  N+PGCG A+ TGG RF E     T                   G   + DG+YVA+GGP+LVACGQG+SMY+VKGC+SSWVLVGG                       GGE                  +P    +  A                         ++ G    ITGGKDSVLREWE+ EGRP L A I+GHTDWISCC+L+PS ++G+ P+VAV      S+R W KS      AA     + A  + S++  ++ S R     G  S     +G+G                                             GWVATGG+DW+VRLWDV K  ELGRLSF GHS  V SLA S+DG +LVSGG+D+K +VWSP+SRR +ATL+ H S V+GV VD GT SG  PRW+A+GGGEGFL +WDPRN+ SPVA L GE     PS  +   + G++     GG  L  G A AR RGESGRWEG+TTGATML +VNCL+AG  G G +WLF AGET +R+WR  DG+WHGG  LPG  + G+AS+SV+E
Sbjct:    3 VMTHTGTKNVPGCGTASSTGGRRFGEGAPATTXXXXXXXXXXXXXXXXXXXGSLPMKDGDYVADGGPVLVACGQGKSMYNVKGCMSSWVLVGGG----------------------GGE------------------QPDAVKEKMATXXXXXXX----------XXXXXXXQASGT--LITGGKDSVLREWEIAEGRPRLVAHISGHTDWISCCALVPSATAGVAPSVAVSGGRDASVRFWHKSDAAAAEAAAARAASDALAKESAQGKRKSSLRAAFASGSRSSSGRDLGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGWVATGGTDWSVRLWDVVKFRELGRLSFMGHSHPVRSLACSSDGKLLVSGGDDHKVIVWSPQSRRPLATLKSHASAVHGVAVDPGTHSGDAPRWIASGGGEGFLLVWDPRNFGSPVAILRGEVTAADPSSLSEAFSSGMSVAEREGG--LQGGLAGARSRGESGRWEGETTGATMLNAVNCLAAGGAGSGGDWLFAAGETVVRSWRRRDGVWHGGAGLPGEGLGGIASLSVIE 520
[Close]
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A1Y2EVM9_9BASI (Uncharacterized protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2EVM9_9BASI)

HSP 1 Score: 70.9 bits (172), Expect = 9.930e-9
Identity = 37/106 (34.91%), Postives = 53/106 (50.00%), Query Frame = 3 
Query: 1077 WVATGGSDWTVRLWDVAKALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIW 1394
            WVA+GG D  +RLWDV +      L        V SLA +  G++L +G  +    VW P+SRR VA L GH   V GVL+      G   +W+ +   +  + +W
Sbjct:  304 WVASGGFDRKIRLWDVGEGRASSVLELPSPPASVYSLATTPSGSLLAAGTPERVVRVWDPRSRRQVARLSGHTDNVRGVLI------GEEGKWLLSASSDSTVKLW 403
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BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A317XLY9_9BASI (WD40 repeat-like protein n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XLY9_9BASI)

HSP 1 Score: 63.5 bits (153), Expect = 1.340e-6
Identity = 48/143 (33.57%), Postives = 70/143 (48.95%), Query Frame = 3 
Query: 1074 GWVATGGSDWTVRLWDVAKALELGRLSF-------RGHSRHVTSLAASA-DGNVLVSGGEDNKAVVWSPKS------RRAVATLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIWDPRNWRSPVATLLGEPSHGAST 1460
            G  ATGGSD TVRLWDVA ++  G +         RG+   VT++  S  DG  + + G D     W  +S      R +V +    E+  + + V     +    R     GG+G + +WD R++R+PV+TL G PS  A T
Sbjct:  280 GVFATGGSDSTVRLWDVA-SMARGHIDIIVLKSKVRGNRTRVTAMQYSPLDGKRIYAAGWDGSLSFWDTRSNLHAKPRGSVDSAHEPETITSSIAVHPAKDNVFASR-----GGDGTVKLWDARSFRAPVSTLAGLPSSSAHT 416
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BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: UPI00146F9869 (WD40 repeat domain-containing protein n=1 Tax=Pseudonocardia spinosispora TaxID=103441 RepID=UPI00146F9869)

HSP 1 Score: 60.8 bits (146), Expect = 3.350e-6
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 3 
Query: 1086 TGGSDWTVRLWDVAKALELGRLSFRGHSR--HVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTV 1304
            +G SD TVR+WD+   L L RL   G  R   + ++A SAD  ++V+GG+D  A VW+ +     ATL GH+  V
Sbjct:  204 SGSSDGTVRIWDITTGLALRRLQAHGVGRVGKIRTMAFSADHEIMVTGGQDRTARVWTSQKMNPHATLSGHDDVV 278
[Close]
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A8H7ER42_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7ER42_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 4.480e-6
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 3 
Query: 1086 TGGSDWTVRLWDVA--KALELGRL-SFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTG 1334
            TGG+D  V +W +   K  +   L S RGHS  VTS+ +S   ++LVSG ED  A+VW     + V TL GHES+V+ V ++  TG
Sbjct: 2807 TGGTDNVVCMWKIKQDKNTDFTLLESLRGHSAPVTSITSSRSYSILVSGSEDKTAIVWDLNRMQYVRTLNGHESSVDIVRINDTTG 2892
[Close]
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A1X0R0E3_RHIZD (Beach-domain-containing protein n=2 Tax=Rhizopus microsporus TaxID=58291 RepID=A0A1X0R0E3_RHIZD)

HSP 1 Score: 62.0 bits (149), Expect = 5.390e-6
Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 3 
Query: 1086 TGGSDWTVRLWDVAKALELGRL---SFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTG-----SGHTPR-WVATG 1367
            TGG+D  V +W V     L  +   S +GH+  VT++ AS   +V+V+G ED  A++W   +++ V +L+GHES+V  + ++  TG     SG+T R W   G
Sbjct: 1446 TGGTDSLVCIWKVKNQKNLEFVLSESLKGHTDVVTTITASRQYSVVVTGSEDKTAIIWDLNTKKYVNSLRGHESSVQHIAINHTTGDIMTCSGNTIRLWTING 1548
[Close]
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A2G4T262_RHIZD (Beach-domain-containing protein n=1 Tax=Rhizopus microsporus ATCC 52813 TaxID=1340429 RepID=A0A2G4T262_RHIZD)

HSP 1 Score: 62.0 bits (149), Expect = 5.770e-6
Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 3 
Query: 1086 TGGSDWTVRLWDVAKALELGRL---SFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLVDQGTG-----SGHTPR-WVATG 1367
            TGG+D  V +W V     L  +   S +GH+  VT++ AS   +V+V+G ED  A++W   +++ V +L+GHES+V  + ++  TG     SG+T R W   G
Sbjct: 2269 TGGTDSLVCIWKVKNQKNLEFVLSESLKGHTDVVTTITASRQYSVVVTGSEDKTAIIWDLNTKKYVNSLRGHESSVQHIAINHTTGDIMTCSGNTIRLWTING 2371
[Close]
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: UPI000A3C1F0E (hypothetical protein n=1 Tax=Lentzea kentuckyensis TaxID=360086 RepID=UPI000A3C1F0E)

HSP 1 Score: 60.5 bits (145), Expect = 1.560e-5
Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = 3 
Query: 1080 VATGGSDWTVRLWDVAKALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAV-VWSPKSRRAVATLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIW--DPRNWRSPVATLLG 1436
            +A+GGSD TVRLWDVA   ++G     GH+  V  +A   DG  L S  + +  + +W   SR  +A ++G  S  +G+ V  GTG       +AT G    + IW  DP + +S V ++LG
Sbjct: 1244 LASGGSDRTVRLWDVATRKQIGA-QLTGHNGVVRGVAFLPDGRTLASVSDYDLVLRLWDVPSRTPLAAVRGSGS-FDGIAVQPGTGL------IATAGLNNVVGIWNPDPASVKSQVCSILG 1357
[Close]
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Match: A0A2G5BCR3_COERN (PFU-domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BCR3_COERN)

HSP 1 Score: 60.1 bits (144), Expect = 1.690e-5
Identity = 42/102 (41.18%), Postives = 54/102 (52.94%), Query Frame = 3 
Query: 1014 GSSEFVTCSACPSGKSSAAAGWVATGGSDWTVRLWDVAKALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVATLQGHESTVNGVLV 1319
            G S +VT  A     +    G +ATGG+D  + +WD A+ L        GH  +V +LAAS DGNVLVSG  D  A VW+    +   TL GH + V  VLV
Sbjct:   55 GHSGYVTSVAIVPSTAEHPHGQIATGGADGRICVWD-AEDLAAPTAVLEGHKDNVCALAASTDGNVLVSGSWDGTARVWT--DGKCTHTLTGHAAAVWDVLV 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9875.17214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5K3X8_9PHAE3.480e-13448.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1I6_ECTSI2.230e-12243.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1Y2EVM9_9BASI9.930e-934.91Uncharacterized protein n=1 Tax=Leucosporidium cre... [more]
A0A317XLY9_9BASI1.340e-633.57WD40 repeat-like protein n=1 Tax=Testicularia cype... [more]
UPI00146F98693.350e-641.33WD40 repeat domain-containing protein n=1 Tax=Pseu... [more]
A0A8H7ER42_9FUNG4.480e-643.02Uncharacterized protein n=1 Tax=Apophysomyces ossi... [more]
A0A1X0R0E3_RHIZD5.390e-635.92Beach-domain-containing protein n=2 Tax=Rhizopus m... [more]
A0A2G4T262_RHIZD5.770e-635.92Beach-domain-containing protein n=1 Tax=Rhizopus m... [more]
UPI000A3C1F0E1.560e-536.07hypothetical protein n=1 Tax=Lentzea kentuckyensis... [more]
A0A2G5BCR3_COERN1.690e-541.18PFU-domain-containing protein n=1 Tax=Coemansia re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9875contigH-elongata_contig9875:1948..6856 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.2
Seed ortholog evalue1.9e-100
Seed eggNOG ortholog2880.D7G1I6
EggNOG free text desc.WD repeat-containing protein
EggNOG OGsKOG0266@1,KOG0266@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size2500
Cds size1530
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9875.17214.1prot_H-elongata_contig9875.17214.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig9875 2691..6629 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931376.9447904-UTR-H-elongata_contig9875:1947..26901622931376.9447904-UTR-H-elongata_contig9875:1947..2690Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9875 1948..2690 -
1691679811.212621-UTR-H-elongata_contig9875:1947..26901691679811.212621-UTR-H-elongata_contig9875:1947..2690Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9875 1948..2690 -
1622931377.025102-UTR-H-elongata_contig9875:6629..68561622931377.025102-UTR-H-elongata_contig9875:6629..6856Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9875 6630..6856 -
1691679811.2544386-UTR-H-elongata_contig9875:6629..68561691679811.2544386-UTR-H-elongata_contig9875:6629..6856Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9875 6630..6856 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931376.9631352-CDS-H-elongata_contig9875:2690..32091622931376.9631352-CDS-H-elongata_contig9875:2690..3209Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9875 2691..3209 -
1691679811.2220333-CDS-H-elongata_contig9875:2690..32091691679811.2220333-CDS-H-elongata_contig9875:2690..3209Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9875 2691..3209 -
1622931376.9763947-CDS-H-elongata_contig9875:4411..45431622931376.9763947-CDS-H-elongata_contig9875:4411..4543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9875 4412..4543 -
1691679811.229813-CDS-H-elongata_contig9875:4411..45431691679811.229813-CDS-H-elongata_contig9875:4411..4543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9875 4412..4543 -
1622931376.9933505-CDS-H-elongata_contig9875:5266..56271622931376.9933505-CDS-H-elongata_contig9875:5266..5627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9875 5267..5627 -
1691679811.2378347-CDS-H-elongata_contig9875:5266..56271691679811.2378347-CDS-H-elongata_contig9875:5266..5627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9875 5267..5627 -
1622931377.0106146-CDS-H-elongata_contig9875:6111..66291622931377.0106146-CDS-H-elongata_contig9875:6111..6629Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9875 6112..6629 -
1691679811.2459295-CDS-H-elongata_contig9875:6111..66291691679811.2459295-CDS-H-elongata_contig9875:6111..6629Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9875 6112..6629 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig9875.17214.1

>prot_H-elongata_contig9875.17214.1 ID=prot_H-elongata_contig9875.17214.1|Name=mRNA_H-elongata_contig9875.17214.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=510bp
MPIPSAGVQTTGEHIHGGVSVVGDGEYVANGGPMLVACGQGQSMYDVKGC
LSSWVLVGGSNSRELRAEGNLMGKSGRGEGGWGGEYGGSGGGGNSCDKPC
HAGRPGVGSDSWALRSNCTAAGDGGVMCCACVPFEGWNKSLGPRMFITGG
KDSVLREWEMVEGRPSLSAEIAGHTDWISCCSLIPSTSSGLPPTVAVSGG
RDGSLRIWSKSAAHVNYPTGATKRNSSRYGKEYSTRGGGGSKGFGVVGTG
GWLLASSLSNAHGSSEFVTCSACPSGKSSAAAGWVATGGSDWTVRLWDVA
KALELGRLSFRGHSRHVTSLAASADGNVLVSGGEDNKAVVWSPKSRRAVA
TLQGHESTVNGVLVDQGTGSGHTPRWVATGGGEGFLFIWDPRNWRSPVAT
LLGEPSHGASTAAGGLAGLSLGGGGHLLAGAEARFRGESGRWEGDTTGAT
MLKSVNCLSAGRTGDGVEWLFGAGETTIRAWRTMDGMWHGGDALPGGDMR
GVASMSVLE*
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mRNA from alignment at H-elongata_contig9875:1948..6856-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig9875.17214.1 ID=mRNA_H-elongata_contig9875.17214.1|Name=mRNA_H-elongata_contig9875.17214.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4909bp|location=Sequence derived from alignment at H-elongata_contig9875:1948..6856- (Himanthalia elongata Himel1 dioecious)
AGGACGCCGAGGACATCCCCGTGGTCGTCGGAGAACGCGTCGGTGCCCCC
ATCCAAGCTAGAGCCATTCCAACCGCCGATGTCACATCAGCAACGTCGCC
TGAGCCCCTTGTCAGATCTTTGTCGTCAAGCTCTACCCTCATCATAGAGA
AGACGGGAAACTTCAACTTGCCCGGATGCGGACAAGCGACCGGCACAGGT
GGAACCCGTTTCATTGAAACGGGGTCTATGCCCATACCCTCCGCGGGCGT
GCAGACAACGGGAGAGCACATACATGGGGGGGTTTCTGTCGTGGGCGATG
GGGAGTACGTCGCTAACGGAGGCCCCATGCTCGTCGCGTGTGGTCAGGGG
CAGTCCATGTACGACGTAAAGGGCTGCCTGTCTTCTTGGGTCTTGGTCGG
AGGCAGCAATTCGCGAGAGCTGCGAGCAGAAGGCAATTTGATGGGAAAGA
GTGGCAGAGGGGAAGGCGGTTGGGGAGGGGAGTATGGAGGCAGTGGCGGG
GGAGGAAACAGTTGCGATAAACCCTGTCACGCGGGCAGACCAGGAGTCGG
ATCGGATTCGTGGGCGCTGAGGTCCAACTGTACTGCGGCGGGCGACGGAG
GGGTCATGTGCTGCGCTTGCGTGCCATTTGAGGGATGGAATAAATCGCTT
GGGCCGCGAATGTTTATCACGGGTGGGAAGGACAGCGTGTTGAGGGAGTG
GGAAATGGTCGAAGGACGTCCCAGTCTTTCTGCCGAGATTGCGGGGTGAG
ATACAGCTGTTGTTCAGGTGCACGGCTGGCCAGGATGAGTCAAATATATC
AATTCGACCACAGACCAACGTTCGTGGGTGAGGTTGTTGCAAGGACAAGA
GATGACAGACATCTGAAACTTACACGCGGTTTGCCATAATGCCCTATTTT
AATCAGAGGAGCGTGCGCGCATGCCTAGAACGCCCCGAGACTCGGTTGGT
GCTTGTCCTGTCCCCGCAATGGAGTTTCGCAATTTATGGAACAATTAAGA
TATGGTCTTCGGTAGGAAACCCTGCCGAATCGTGGCGTCCGCTGGACGAG
TAGAAACATATTTTGAATCAAGTACACGAATATGATTTTTGAAATGCTGA
CTTATTTGATATCGCTTATCAACGGGCCGCGTGTTTATCTTCCACGTTGT
GTCATACCGACGCGAAAGCCTAATGTTTCCACCCATGTTCGCACGCCAAG
CCTATCCCCCCTCATCCCGTCCACTGCAGACACACGGATTGGATATCTTG
CTGTTCACTTATACCCTCGACTTCATCGGGCCTGCCCCCAACCGTCGCCG
TATCGGGCGGGAGAGATGGGTCCCTGAGAATCTGGTCGAAATCGGCTGCT
CACGTAAACTATCCCACTGGTGCTACGAAGCGAAATTCCTCGAGATATGG
TAAAGAATATTCGACCCGTGGCGGTGGCGGCAGCAAGGGTTTCGGCGTCG
TCGGCACCGGGGGTTGGTTACTAGCGTCGTCACTGTCGAATGCCCACGGA
TCGTCGGAATTCGTTACGTGCAGCGCGTGTCCTAGTGGCAAGTCCAGTGC
AGCGGCCGGCTGGGTTGCCACAGGCGGCTCTGACTGGACGGCAAGTTCTT
TAAAGTATTATTTACCAGCGTCTTTTAATAAGTGCATTTACGGGTGACGG
GCACGCATCTTCACGCTTCGGCCTGTTTATCACATCGCCACGCCCTGTTT
TAACTGAAAATACTCATGAGATCCCTTGGTGGCTTCACGCATCCGGTGTT
TGTTACGGAGGTGTCTTGCATCAGCGCTCGGTTTTTCAAACACATGCACC
AGAGAGTTGCAGTCTTCAGGATTTGGTGTGATGCTTATTTTGGGAGTAGC
TTGTGCATGGTTTGCTTTATAAGAAAACGCAGTCAATATACAACGGACGA
GTAATACATGTTTCGGGACTGCATTCACTCTATGGTCGTATGACCTTAGC
CACCCCGCCACGATAGTGAATCGGCGGTGACGGTGAGCTGTAATTCACGT
GTGTTAAAAATGCCACAAGTTTTAGTGAAATAAAGCTTACGGTAAAAAAA
TAATATTTTGACTTCGATAATACTGGTAGGTTTCAGCGACTCACTTCAGG
CGTCCAGTTCGAAATTCGATAGCTAACGGCAGCACATTTGTTCTCCCGCG
CCCAAAATCAGTGTTATATTTTTGCCGCGAGTTCTGTGCGAGCAATAAAC
TTTTAGAAGGCAAACATAAACGATACACGCCACTGTTGTGATCTACAACG
TTTCAACCGATGTAAATATTCGAAGCCTTTGGACGGGTTTCCTTCTTGTG
CGGTGGTAAACAGGTGCGCCTTTGGGACGTCGCGAAGGCTCTCGAGCTCG
GCCGCCTCTCCTTCAGGGGTCACAGCCGCCACGTAACATCACTAGCGGCC
TCGGCCGACGGAAACGTCCTTGTCAGTGGGGGTGAAGACAATAAAGTGAG
CTGCGCCGCTTTCCCCGCCGCCCTGAAAATAAAATTCCACCTCAATCCCT
CTCCCACGCCCCCTATCTTCAAACTACGACTAACTGCTGCATGCGCGGTC
GGGGTATGGATAGAATGATCGCCATCTCAGCCATTGCCCTTAAGTGTGCC
GAGACGCCTGTTGTTTTGTCGAACCGCTTTTCGGGGATGTGAATCTCGAT
CAACCCGACGGAGTTAAATCTTCATCCGGCGGCGGCGATCCAGATGCCGA
AGATATTCCCTGACTGGCGCGGCCTGACATCCCACCAATTAACAATCCTG
CTTCTCCACGTCCTTACGCGTGCTGGGAAAGAAGATCGTTTAATAGGAAA
CTTGCATGGGCATCATCCAACACATAAGTACATACTAGCACCGCATTGTC
ATTGTTCGCCTCATAAACTGCACTGCCAGTTAAATAGAAGCCCTGTGTTC
GATTATCGGTTAAACACTGTTGTAACCAAAAGCGTGTGAATGTCCAGTGA
GCAATATTAGATCCGTGGTTGACGTGGTGTTGGAGTGCTGATGTTCTTCG
TGATAAAACAAGATTAGGCGTGAACCAGTCAAATATGGGTAGATTCCTTA
GAACTACAGATGGGATGTGCAACGAAGTGGAAGATTGGATTGTTAACCTA
GAACGGTGAATAGCTCCATCGTCAAAGAGTGAGAACACACGACAGGTATA
GCTACGGCTGTATCTATCGAAAGCTACATCCTAGAGATTTTAAAGCACCG
TATATGCATGTTGCACAGCGCACTTATGGTCCTTTTTTGTAATCCATTGT
CGCTAAGAATGCCGCGTACCCCATCTTCCACCCTGTTTCTACCGGGGCAT
CTCCTCTATTTTAACCTCATCGCAGTGAAAATTATGAACGCCATGAAAGA
GCGAAATGATTTAGGGTGTTTCACTGCGTAGTTTCTGCTTCTCTCGGAAC
TCTTTATATTATGCTTGTGTTTTAGCAGCGCGTAGAACAATCAACTCACG
CGTGATGAGTAGAGAAGAACAGAAGCAATACGCACGGTGATTGATCTGAC
AAACACACCCTTTCGCGCAGTCAATTATGTTGCCCATGAGCATTGTGGTG
CATTGAGTTGCACGTCTAACGTTCTGATGACAACTCTCGCTGGTCTTCTC
CCTCTTGGCCCTCCGCCCTGTACTCCCGGGTGGTATGTCTTAAAAAGGCT
GTCGTGTGGTCGCCGAAGAGCCGGAGGGCGGTCGCTACCCTCCAGGGCCA
TGAGAGCACCGTCAATGGCGTCCTCGTTGACCAGGGGACGGGTTCTGGCC
ACACACCGCGCTGGGTTGCTACCGGCGGGGGGGAAGGATTCCTCTTCATT
TGGGACCCCCGCAACTGGCGCTCCCCGGTAGCTACTCTGTTAGGGGAGCC
CTCTCATGGCGCATCGACCGCGGCTGGCGGCCTCGCGGGACTTTCTCTGG
GCGGGGGAGGCCACCTGCTCGCTGGGGCGGAGGCAAGGTTCCGAGGCGAA
TCTGGCAGATGGGAAGGCGATACGACGGGTGCAACAATGCTGAAAAGTGT
CAACTGCCTGTCGGCGGGGCGGACGGGGGACGGGGTTGAGTGGTTGTTTG
GGGCCGGGGAGACTACGATCCGCGCTTGGCGGACCATGGATGGGATGTGG
CACGGAGGGGACGCACTCCCCGGAGGAGATATGCGTGGCGTGGCGAGCAT
GTCCGTTTTGGAATGATTATATAAACTACATTGAAAGTTCTCAAGAAGAG
CGCTTGTACATTTGTGTCAAGTAGGCAATGAAATAGGAAGGGCGGTCGCA
TCACCCTGTGGTCTTCTAATAGTACGAGAGGGTCAAATGCCGCCATGATG
TTTTTTTGTATGTTGGGAGTGAAGAACGAGTCCTTTGGGGGGACTTTTGT
TGTCGGAATATATGTCGTGCTACGCTACGAACATACTGCGACTGTACTAG
GCATGCATTTGTACTACACACGGAGTTATAAAACCAGCAGGACGGTTAGC
AGAGTTCAGTGTCGCGGTAGTTTACTCCCAAGGCGCTCGGCAGGGGGCCT
TAGCTTGATTCTTTAATTTGGAAGTGCATTTTCGTAACTGAAGGCGAATG
AATCGCTCCGTAAGACCTAGCGGCATTTATCCCCATGTACATCCTGAGCT
TGGAGCTGGCAGCTTCTTGGGTCCTCTCTTGTAGTGCCCTGTAGCACTTA
CTCTTTCCCTTTTGTAGATCACTACCACTCGTGGCTTATAAGGAAAACAT
GGTATTACTAATATATCCGTGGAAACCCATGCAGGCTAGAGACGACGGAA
TACGTAGTGATTCAAAGCCATTGCACTAAATAGTGAGCCCCCGGGATGAG
TTAGTATAATCGATCCCGCGCACTTTGCCTCAATTGGTTTCAAACACGGA
AGAACATTACCCCCTCACTACTACACAACCCACCACTAGTGGCTAGAGGA
CTACCCTGC
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Coding sequence (CDS) from alignment at H-elongata_contig9875:1948..6856-

>mRNA_H-elongata_contig9875.17214.1 ID=mRNA_H-elongata_contig9875.17214.1|Name=mRNA_H-elongata_contig9875.17214.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3060bp|location=Sequence derived from alignment at H-elongata_contig9875:1948..6856- (Himanthalia elongata Himel1 dioecious)
ATGCCCATACCCTCCGCGGGCGTGCAGACAACGGGAGAGCACATACATGG
GGGGGTTTCTGTCGTGGGCGATGGGGAGTACGTCGCTAACGGAGGCCCCA
TGCTCGTCGCGTGTGGTCAGGGGCAGTCCATGTACGACGTAAAGGGCTGC
CTGTCTTCTTGGGTCTTGGTCGGAGGCAGCAATTCGCGAGAGCTGCGAGC
AGAAGGCAATTTGATGGGAAAGAGTGGCAGAGGGGAAGGCGGTTGGGGAG
GGGAGTATGGAGGCAGTGGCGGGGGAGGAAACAGTTGCGATAAACCCTGT
CACGCGGGCAGACCAGGAGTCGGATCGGATTCGTGGGCGCTGAGGTCCAA
CTGTACTGCGGCGGGCGACGGAGGGGTCATGTGCTGCGCTTGCGTGCCAT
TTGAGGGATGGAATAAATCGCTTGGGCCGCGAATGTTTATCACGGGTGGG
AAGGACAGCGTGTTGAGGGAGTGGGAAATGGTCGAAGGACGTCCCAGTCT
TTCTGCCGAGATTGCGGGATGCCCATACCCTCCGCGGGCGTGCAGACAAC
GGGAGAGCACATACATGGGGGGGTTTCTGTCGTGGGCGATGGGGAGTACG
TCGCTAACGGAGGCCCCATGCTCGTCGCGTGTGGTCAGGGGCAGTCCATG
TACGACGTAAAGGGCTGCCTGTCTTCTTGGGTCTTGGTCGGAGGCAGCAA
TTCGCGAGAGCTGCGAGCAGAAGGCAATTTGATGGGAAAGAGTGGCAGAG
GGGAAGGCGGTTGGGGAGGGGAGTATGGAGGCAGTGGCGGGGGAGGAAAC
AGTTGCGATAAACCCTGTCACGCGGGCAGACCAGGAGTCGGATCGGATTC
GTGGGCGCTGAGGTCCAACTGTACTGCGGCGGGCGACGGAGGGGTCATGT
GCTGCGCTTGCGTGCCATTTGAGGGATGGAATAAATCGCTTGGGCCGCGA
ATGTTTATCACGGGTGGGAAGGACAGCGTGTTGAGGGAGTGGGAAATGGT
CGAAGGACGTCCCAGTCTTTCTGCCGAGATTGCGGGACACACGGATTGGA
TATCTTGCTGTTCACTTATACCCTCGACTTCATCGGGCCTGCCCCCAACC
GTCGCCGTATCGGGCGGGAGAGATGGGTCCCTGAGAATCTGGTCGAAATC
GGCTGCTCACGTAAACTATCCCACTGGTGCTACGAAGCGAAATTCCTCGA
GATATGGTAAAGAATATTCGACCCGTGGCGGTGGCGGCAGCAAGGGTTTC
GGCGTCGTCGGCACCGGGGGTTGGTTACTAGCGTCGTCACTGTCGAATGC
CCACGGATCGTCGGAATTCGTTACGTGCAGCGCGTGTCCTAGTGGCAAGT
CCAGTGCAGCGGCCGGCTGGGTTGCCACAGGCGGCTCTGACTGGACGACA
CACGGATTGGATATCTTGCTGTTCACTTATACCCTCGACTTCATCGGGCC
TGCCCCCAACCGTCGCCGTATCGGGCGGGAGAGATGGGTCCCTGAGAATC
TGGTCGAAATCGGCTGCTCACGTAAACTATCCCACTGGTGCTACGAAGCG
AAATTCCTCGAGATATGGTAAAGAATATTCGACCCGTGGCGGTGGCGGCA
GCAAGGGTTTCGGCGTCGTCGGCACCGGGGGTTGGTTACTAGCGTCGTCA
CTGTCGAATGCCCACGGATCGTCGGAATTCGTTACGTGCAGCGCGTGTCC
TAGTGGCAAGTCCAGTGCAGCGGCCGGCTGGGTTGCCACAGGCGGCTCTG
ACTGGACGGTGCGCCTTTGGGACGTCGCGAAGGCTCTCGAGCTCGGCCGC
CTCTCCTTCAGGGGTCACAGCCGCCACGTAACATCACTAGCGGCCTCGGC
CGACGGAAACGTCCTTGTCAGTGGGGGTGAAGACAATAAAGTGCGCCTTT
GGGACGTCGCGAAGGCTCTCGAGCTCGGCCGCCTCTCCTTCAGGGGTCAC
AGCCGCCACGTAACATCACTAGCGGCCTCGGCCGACGGAAACGTCCTTGT
CAGTGGGGGTGAAGACAATAAAGCTGTCGTGTGGTCGCCGAAGAGCCGGA
GGGCGGTCGCTACCCTCCAGGGCCATGAGAGCACCGTCAATGGCGTCCTC
GTTGACCAGGGGACGGGTTCTGGCCACACACCGCGCTGGGTTGCTACCGG
CGGGGGGGAAGGATTCCTCTTCATTTGGGACCCCCGCAACTGGCGCTCCC
CGGTAGCTACTCTGTTAGGGGAGCCCTCTCATGGCGCATCGACCGCGGCT
GGCGGCCTCGCGGGACTTTCTCTGGGCGGGGGAGGCCACCTGCTCGCTGG
GGCGGAGGCAAGGTTCCGAGGCGAATCTGGCAGATGGGAAGGCGATACGA
CGGGTGCAACAATGCTGAAAAGTGTCAACTGCCTGTCGGCGGGGCGGACG
GGGGACGGGGTTGAGTGGTTGTTTGGGGCCGGGGAGACTACGATCCGCGC
TTGGCGGACCATGGATGGGATGTGGCACGGAGGGGACGCACTCCCCGGAG
GAGATATGCGTGGCGTGGCGAGCATGTCCGTTTTGGAATGAGCTGTCGTG
TGGTCGCCGAAGAGCCGGAGGGCGGTCGCTACCCTCCAGGGCCATGAGAG
CACCGTCAATGGCGTCCTCGTTGACCAGGGGACGGGTTCTGGCCACACAC
CGCGCTGGGTTGCTACCGGCGGGGGGGAAGGATTCCTCTTCATTTGGGAC
CCCCGCAACTGGCGCTCCCCGGTAGCTACTCTGTTAGGGGAGCCCTCTCA
TGGCGCATCGACCGCGGCTGGCGGCCTCGCGGGACTTTCTCTGGGCGGGG
GAGGCCACCTGCTCGCTGGGGCGGAGGCAAGGTTCCGAGGCGAATCTGGC
AGATGGGAAGGCGATACGACGGGTGCAACAATGCTGAAAAGTGTCAACTG
CCTGTCGGCGGGGCGGACGGGGGACGGGGTTGAGTGGTTGTTTGGGGCCG
GGGAGACTACGATCCGCGCTTGGCGGACCATGGATGGGATGTGGCACGGA
GGGGACGCACTCCCCGGAGGAGATATGCGTGGCGTGGCGAGCATGTCCGT
TTTGGAATGA
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