prot_H-elongata_contig98042.17153.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98042.17153.1
Unique Nameprot_H-elongata_contig98042.17153.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: A0A6H5JMA5_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA5_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.400e-14
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    9 VLVLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVHR 47
            VL L+LYP SWSHVYIPVLPEALLGVL+APMPFLIGVHR
Sbjct:  443 VLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHR 481          
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: D7FMH7_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH7_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.400e-14
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    8 KVLVLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVHR 47
            +VL L+LYP SWSHVYIPVLPEALLGVL+APMPFLIGVHR
Sbjct:  244 EVLSLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHR 283          
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: A0A835ZGT0_9STRA (UDENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGT0_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.430e-11
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    8 KVLVLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVH 46
            +VL  LLYP  W+HVYIPVLPE L+GVL APMPF++GVH
Sbjct:  293 EVLTTLLYPLCWTHVYIPVLPEPLMGVLGAPMPFIVGVH 331          
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: A0A0H5R8J7_9EUKA (UDENN domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R8J7_9EUKA)

HSP 1 Score: 62.4 bits (150), Expect = 4.180e-10
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   11 VLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVHR 47
            +LL+YPF W HVYIP+LPEALL  L+APMPFLIG H 
Sbjct:  394 LLLMYPFRWQHVYIPLLPEALLDFLNAPMPFLIGTHH 430          
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: A0A7S2RHS4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RHS4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.180e-10
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    8 KVLVLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVHR 47
            +V+  LLYPF WSHVYIP+LP+A+L VL AP+PF+IGVH 
Sbjct:  251 EVMRALLYPFCWSHVYIPLLPKAMLMVLQAPLPFMIGVHE 290          
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: A0A0G4IP83_PLABS (UDENN domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IP83_PLABS)

HSP 1 Score: 61.6 bits (148), Expect = 7.810e-10
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    8 KVLVLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVH 46
            +  +LL+YPF W HVYIP+LPEALL  L+APMP+LIG H
Sbjct:  341 ETFLLLMYPFRWQHVYIPLLPEALLDFLNAPMPYLIGTH 379          
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: S4RUT0_PETMA (UDENN domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RUT0_PETMA)

HSP 1 Score: 59.3 bits (142), Expect = 2.840e-9
Identity = 28/37 (75.68%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   10 LVLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVH 46
            L LLLYP SW HVYIP+LP  LL   SAPMPFLIGVH
Sbjct:  191 LALLLYPMSWQHVYIPLLPPHLLEYCSAPMPFLIGVH 227          
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: S4RUS8_PETMA (UDENN domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RUS8_PETMA)

HSP 1 Score: 59.3 bits (142), Expect = 3.260e-9
Identity = 28/37 (75.68%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   10 LVLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVH 46
            L LLLYP SW HVYIP+LP  LL   SAPMPFLIGVH
Sbjct:  207 LALLLYPMSWQHVYIPLLPPHLLEYCSAPMPFLIGVH 243          
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: A0A0L0FY96_9EUKA (UDENN domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FY96_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 5.100e-9
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 0
Query:   13 LLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVHR 47
            LLYP SW H++IPVLPE LL  ++APMPFL+GVH+
Sbjct:  236 LLYPLSWQHIFIPVLPEQLLDYVTAPMPFLVGVHK 270          
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Match: UPI0014042311 (DENN domain-containing protein 1B-like isoform X1 n=4 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014042311)

HSP 1 Score: 59.3 bits (142), Expect = 5.100e-9
Identity = 28/37 (75.68%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   10 LVLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVH 46
            L LLLYP SW HVYIP+LP  LL   SAPMPFLIGVH
Sbjct:  217 LALLLYPMSWQHVYIPLLPPHLLEYCSAPMPFLIGVH 253          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98042.17153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMA5_9PHAE1.400e-1489.74UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FMH7_ECTSI1.400e-1487.50UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZGT0_9STRA3.430e-1171.79UDENN domain-containing protein n=1 Tax=Tribonema ... [more]
A0A0H5R8J7_9EUKA4.180e-1072.97UDENN domain-containing protein n=1 Tax=Spongospor... [more]
A0A7S2RHS4_9STRA4.180e-1067.50Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0G4IP83_PLABS7.810e-1066.67UDENN domain-containing protein n=1 Tax=Plasmodiop... [more]
S4RUT0_PETMA2.840e-975.68UDENN domain-containing protein n=1 Tax=Petromyzon... [more]
S4RUS8_PETMA3.260e-975.68UDENN domain-containing protein n=1 Tax=Petromyzon... [more]
A0A0L0FY96_9EUKA5.100e-968.57UDENN domain-containing protein n=1 Tax=Sphaerofor... [more]
UPI00140423115.100e-975.68DENN domain-containing protein 1B-like isoform X1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11500coord: 7..47
e-value: 5.8E-16
score: 60.5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..47
NoneNo IPR availableTMHMMTMhelixcoord: 23..45
IPR001194cDENN domainPFAMPF02141DENNcoord: 9..47
e-value: 5.9E-16
score: 59.0
IPR040032DENN domain-containing protein 1A/1B/1CPANTHERPTHR13196DENN DOMAIN-CONTAININGcoord: 11..46
IPR037516Tripartite DENN domainPROSITEPS50211DENNcoord: 1..47
score: 14.809

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98042contigH-elongata_contig98042:1747..1890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98042.17153.1mRNA_H-elongata_contig98042.17153.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98042 1747..1890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98042.17153.1 ID=prot_H-elongata_contig98042.17153.1|Name=mRNA_H-elongata_contig98042.17153.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
SRAAIPPKVLVLLLYPFSWSHVYIPVLPEALLGVLSAPMPFLIGVHR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001194cDENN_dom
IPR040032DENND1A/B/C
IPR037516Tripartite_DENN