prot_H-elongata_contig97867.17130.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97867.17130.1
Unique Nameprot_H-elongata_contig97867.17130.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
BLAST of mRNA_H-elongata_contig97867.17130.1 vs. uniprot
Match: D7FJB1_ECTSI (Fucokinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB1_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 7.120e-25
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 PFDCIAITAPNPRASKAYLRELVRRVGGNGT---KEILILAVSDPEGVRIGSGGGTLNAILEV 60
            PFDC+AITAPNPRA+KAYL ELV RVG NGT   KE+LILAVSDPEGVRIGSGGGTLNA+LE+
Sbjct:   35 PFDCLAITAPNPRAAKAYLDELVHRVGVNGTEGTKEVLILAVSDPEGVRIGSGGGTLNAVLEI 97          
BLAST of mRNA_H-elongata_contig97867.17130.1 vs. uniprot
Match: A0A6H5LE27_9PHAE (FK protein ( GFPPprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE27_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 8.690e-24
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 0
Query:    2 FDCIAITAPNPRASKAYLRELVRRVGGNGT---KEILILAVSDPEGVRIGSGGGTLNAILEV 60
            FDC+AITAPNPRASKAYL ELV RVG +GT   KE+LILAVSDPEGVRIGSGGGTLNA+LE+
Sbjct:   36 FDCLAITAPNPRASKAYLDELVHRVGMSGTEGTKEVLILAVSDPEGVRIGSGGGTLNAVLEI 97          
BLAST of mRNA_H-elongata_contig97867.17130.1 vs. uniprot
Match: A0A7S2WFB1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFB1_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 3.610e-10
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 PFDCIAITAPNPR---ASKAYL-RELVRRVGGNGTKEILILAVSDPEGVRIGSGGGTLNAI 57
            PFDC+ +T PN R   A++A L R   R V   G    ++LAV+DPEG R+GSGGGTLNA+
Sbjct:   16 PFDCVVVTCPNRRSADATRAVLPRVFDRAVDAGGGPRPVLLAVADPEGRRVGSGGGTLNAM 76          
BLAST of mRNA_H-elongata_contig97867.17130.1 vs. uniprot
Match: A0A482RU81_9ARCH (Fucokinase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU81_9ARCH)

HSP 1 Score: 53.9 bits (128), Expect = 1.800e-7
Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    2 FDCIAITAPNPRASKAYLRELVR-RVGGNGTKEILILAVSDPEGVRIGSGGGTLNAI 57
            F  I ITAPN R++  Y REL + R G +        AVSDPEG R+GSGGGTL+ +
Sbjct:    4 FSHIVITAPNERSATLYERELQKLRRGAHELSACQFFAVSDPEGQRLGSGGGTLHVL 60          
BLAST of mRNA_H-elongata_contig97867.17130.1 vs. uniprot
Match: A0A6V7XEX4_9BILA (Hypothetical protein n=4 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7XEX4_9BILA)

HSP 1 Score: 50.8 bits (120), Expect = 9.110e-6
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    2 FDCIAITAPNPRASKAYLREL--VRRVGGNGTKEILILAVSDPEGVRIGSGGGTLNAIL 58
            +DC+ +TA N +    +L++L  +R    N  KE ++LA   PEGVRIGSGG TLNA+L
Sbjct:   26 WDCLLLTARNEKQRNIFLQQLQHLRLKERNFCKEYVVLA-DKPEGVRIGSGGATLNALL 83          
BLAST of mRNA_H-elongata_contig97867.17130.1 vs. uniprot
Match: UPI000D1CD0F0 (bifunctional fucokinase/fucose pyrophosphorylase-like n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CD0F0)

HSP 1 Score: 50.8 bits (120), Expect = 9.240e-6
Identity = 30/60 (50.00%), Postives = 35/60 (58.33%), Query Frame = 0
Query:    2 FDCIAITAPNPRASKAYLRELVRRVG-GNGTKEILILAVSDPEGVRIGSGGGTLNAILEV 60
            +D I ITA  P  ++ Y   L R V  G   K  L+LAV DP G RIGSGG TL AI E+
Sbjct:   27 WDAILITAAGPDQARLYQLHLQRAVDRGRIAKHTLVLAVPDPLGRRIGSGGATLGAIREL 86          
BLAST of mRNA_H-elongata_contig97867.17130.1 vs. uniprot
Match: A0A7S0NP40_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NP40_9EUKA)

HSP 1 Score: 48.1 bits (113), Expect = 1.340e-5
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    5 IAITAPNPRASKAYLRELVRR--VGGNGTKEILILAVSDPEGVRIGSGGGTLNAILEV 60
            I  TA N   + AY +E+  R  +G    +  LIL+V+DP G RIGSGGGTLNA++ V
Sbjct:   21 IVCTAANEAQADAYRKEMDARRALGSLPPRCSLILSVADPCGARIGSGGGTLNALVAV 78          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97867.17130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FJB1_ECTSI7.120e-2582.54Fucokinase domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5LE27_9PHAE8.690e-2482.26FK protein ( GFPPprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A7S2WFB1_9STRA3.610e-1052.46Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A482RU81_9ARCH1.800e-750.88Fucokinase domain-containing protein (Fragment) n=... [more]
A0A6V7XEX4_9BILA9.110e-647.46Hypothetical protein n=4 Tax=Meloidogyne enterolob... [more]
UPI000D1CD0F09.240e-650.00bifunctional fucokinase/fucose pyrophosphorylase-l... [more]
A0A7S0NP40_9EUKA1.340e-548.28Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97867contigH-elongata_contig97867:1321..1506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97867.17130.1mRNA_H-elongata_contig97867.17130.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97867 1321..1506 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97867.17130.1 ID=prot_H-elongata_contig97867.17130.1|Name=mRNA_H-elongata_contig97867.17130.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
PFDCIAITAPNPRASKAYLRELVRRVGGNGTKEILILAVSDPEGVRIGSG
GGTLNAILEVT*
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