mRNA_H-elongata_contig95794.16978.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.280e-22 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 1 MEHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALKNTWGVVE 249
M E + G +Y DPL+WWR+ FP LA LARR+LAIPA+QA+SER+FS AG +VT+ RN L VELLV L+++W +VE
Sbjct: 209 MYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 291
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 1.530e-21 Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 1 MEHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALKNTWGVVE 249
M+ K ++ +PL+ WR +++P LAALARR+LAIP+SQAQSERVFS+AG VT TR+RL +NVELLV L+N WGVV+
Sbjct: 469 MQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVD 551
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 2.550e-17 Identity = 41/74 (55.41%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 13 QQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALKNT 234
++ G+ + PL WWR+ ++P LA+LARR+L IPA QAQSERVFSSAG +VT+TR R+ +NV L+V L+NT
Sbjct: 470 EEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: UPI000C26C2C9 (zinc finger BED domain-containing protein 4-like n=3 Tax=Drosophila willistoni TaxID=7260 RepID=UPI000C26C2C9) HSP 1 Score: 75.5 bits (184), Expect = 2.320e-15 Identity = 35/82 (42.68%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 4 EHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALKNTWGVVE 249
++ +QN DPL++W++N ++F LA A+++L IP S +SERVFS AG++V+Q R+RL K V +L+ALK ++E
Sbjct: 78 QYLEQNNATQDVDPLDYWKINEIQFGQLAKCAKKILCIPGSSVESERVFSKAGEIVSQKRSRLKPKAVNMLLALKQNQWILE 159
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: UPI000EAB1B8F (zinc finger BED domain-containing protein 1-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI000EAB1B8F) HSP 1 Score: 74.3 bits (181), Expect = 7.940e-15 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 16 QNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELL 216
QN +I +WW+ N V+FP LAA+AR LLAIPA+Q SER+FS+AG +V + R+RL S+NVE+L
Sbjct: 99 QNTNVI-----SWWKANIVRFPLLAAVARNLLAIPATQVTSERLFSTAGNIVNEKRSRLCSENVEML 160
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: UPI00109FC612 (zinc finger BED domain-containing protein 4-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI00109FC612) HSP 1 Score: 73.2 bits (178), Expect = 1.020e-14 Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 1 MEHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALK 228
+ +E +G + DPL WW+ N K+P LA +AR LA+P + SERVFS+AG +VT R+ L+ +NV++L+ LK
Sbjct: 53 VSYEAASGIPVDGDPLTWWKSNECKYPHLATMARHHLAVPGTSVPSERVFSTAGDIVTAKRSTLSPENVDILMFLK 128
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: UPI0007B8209D (zinc finger BED domain-containing protein 1-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B8209D) HSP 1 Score: 73.6 bits (179), Expect = 1.680e-14 Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 1 MEHEQQNGKIIYPDPLN-----WWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVAL 225
+E E QN P PLN WW++N ++FP LA LARR L IPA+ SERVFS+AG VT+ R+RLT +V +L+ L
Sbjct: 88 IEAELQNFLRETPPPLNCTPTDWWKVNGIRFPGLAKLARRYLCIPATSVPSERVFSAAGLTVTRLRSRLTPDHVNMLIFL 167
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A2G9RVU8_LITCT (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RVU8_LITCT) HSP 1 Score: 74.3 bits (181), Expect = 2.070e-14 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 19 NGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVALK 228
N + DPL WW+ N K+P +A +AR LA+P S SERVFS+AG +VT TR+ L+ NV++LV LK
Sbjct: 146 NSITVDSDPLTWWKSNECKYPHIATMARCYLAVPGSSVPSERVFSTAGDIVTATRSTLSPDNVDILVFLK 215
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A8C1EL35_CYPCA (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1EL35_CYPCA) HSP 1 Score: 75.5 bits (184), Expect = 4.280e-14 Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 1 MEHEQQNGKIIYPDPLN-----WWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVAL 225
+E E QN P PLN WW++N ++FP LA LARR L IPA+ SERVFS+AG VT+ R+RLTS +V +L+ L
Sbjct: 395 IEAELQNFLRETPPPLNCTPTDWWKVNGIRFPGLAKLARRYLCIPATSVPSERVFSAAGLTVTRLRSRLTSDHVNMLIFL 474
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Match: A0A6P7FJL1_DIAVI (zinc finger BED domain-containing protein 1-like n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7FJL1_DIAVI) HSP 1 Score: 70.1 bits (170), Expect = 6.090e-14 Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 40 DPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFSSAGQMVTQTRNRLTSKNVELLVAL-KNTW 237
DPL +W++NT F P+ L+++ L IPAS +SER FS+AGQ+V+ R+R+ KNV++LV + KN W
Sbjct: 22 DPLLFWKVNTNDFEPMLELSKKYLCIPASSVESERTFSTAGQIVSDRRSRIKPKNVDMLVFINKNQW 88 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95794.16978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig95794.16978.1 >prot_H-elongata_contig95794.16978.1 ID=prot_H-elongata_contig95794.16978.1|Name=mRNA_H-elongata_contig95794.16978.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp MEHEQQNGKIIYPDPLNWWRLNTVKFPPLAALARRLLAIPASQAQSERVFback to top mRNA from alignment at H-elongata_contig95794:905..1153- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig95794.16978.1 ID=mRNA_H-elongata_contig95794.16978.1|Name=mRNA_H-elongata_contig95794.16978.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=249bp|location=Sequence derived from alignment at H-elongata_contig95794:905..1153- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig95794:905..1153- >mRNA_H-elongata_contig95794.16978.1 ID=mRNA_H-elongata_contig95794.16978.1|Name=mRNA_H-elongata_contig95794.16978.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at H-elongata_contig95794:905..1153- (Himanthalia elongata Himel1 dioecious)back to top |