prot_H-elongata_contig9540.16946.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9540.16946.1
Unique Nameprot_H-elongata_contig9540.16946.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length208
Homology
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: D8LRM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM7_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 2.890e-121
Identity = 167/208 (80.29%), Postives = 185/208 (88.94%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 208
            W IP+AHR AVTCCAV +DS A FLVTG+EDGSV+VW LRTR+LLL FSEHQKGV  VLVDV  P LVHSAG DCTVLTYDLRKE+R +AHMTR GAFQ MTQR+DSENELITCD+HGRLL WDCDY  PVQA+QDPS++RLSCVSVSPSGRY+ALGGD+E +K+LDL  NCE VACGRAHAGAITSVQWTRDERQL+SAAEDCTLA+
Sbjct:  137 WAIPKAHRAAVTCCAVRFDSSASFLVTGAEDGSVSVWSLRTRELLLRFSEHQKGVTTVLVDVASPNLVHSAGTDCTVLTYDLRKEKRTVAHMTRGGAFQGMTQRIDSENELITCDIHGRLLTWDCDYPAPVQAMQDPSKQRLSCVSVSPSGRYMALGGDDELVKVLDLATNCETVACGRAHAGAITSVQWTRDERQLISAAEDCTLAI 344          
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S2UWQ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ1_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.050e-79
Identity = 113/208 (54.33%), Postives = 157/208 (75.48%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 208
            W IP AHR A+T  AVH+D   G++VTG++DG+V +W LR+R++LL F+EHQKGV  V+VDV  P LVHSAG DC VLTYD++KERR +AHM REGAF  ++QR+DSE EL+TCD  GR+  WDCD + P QALQDPS+ R+  VSVSPSG ++A+GG++  +K+LDL  + + +A GR H+  ++ V W+ DE+Q++S  +DC + +
Sbjct:  452 WHIPNAHRAAITSLAVHHDERLGYIVTGAKDGAVRLWNLRSREMLLQFTEHQKGVSKVIVDVRLPKLVHSAGLDCAVLTYDIQKERRTVAHMVREGAFLGLSQRVDSEQELVTCDAAGRIFFWDCDVQGPTQALQDPSRDRIRAVSVSPSGHFMAIGGEDHLVKVLDLTADGDILAVGRGHSAPVSDVFWSPDEKQIISIGDDCCVCI 659          
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S2FKB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKB8_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.340e-76
Identity = 114/208 (54.81%), Postives = 149/208 (71.63%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 208
            WEIP AHR AVT  A H D+   ++++G EDGSV +W LR+R+L+L F EH+KGV  VLVDV  P LVHSAG DC+V TYDLRKERR +AHM REGAF  +TQRLDSE EL+TCD++GRLL WDCD  +PVQ LQ P +  + CVSVSP+GRY+A+ GD   + + DL    + +A G  H+  +  + W+ DE+Q++S  +DC + V
Sbjct:  234 WEIPNAHRGAVTTVATHSDASLSYVLSGGEDGSVRIWALRSRELMLQFVEHKKGVSQVLVDVKSPNLVHSAGLDCSVFTYDLRKERRCVAHMVREGAFTGLTQRLDSEQELVTCDMNGRLLFWDCDVPDPVQVLQSPQRMTMRCVSVSPTGRYLAICGDFL-VNVFDLRGGVQLMAQGLGHSEPVRDLYWSPDEKQVISVGDDCCICV 440          
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S2BHX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHX7_9STRA)

HSP 1 Score: 246 bits (627), Expect = 6.610e-74
Identity = 114/208 (54.81%), Postives = 149/208 (71.63%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 208
            WEIP AHR AVT  A H D+   ++++G EDGSV +W LR+R+L+L F EH+KGV  VLVDV  P LVHSAG DC+V TYDLRKERR +AHM REGAF  +TQRLDSE EL+TCD++GRLL WDCD  +PVQ LQ P +  + CVSVSP+GRY+A+ GD   + + DL    + +A G  H+  +  + W+ DE+Q++S  +DC + V
Sbjct:  513 WEIPNAHRGAVTTVATHSDASLSYVLSGGEDGSVRIWALRSRELMLQFVEHKKGVSQVLVDVKSPNLVHSAGLDCSVFTYDLRKERRCVAHMVREGAFTGLTQRLDSEQELVTCDMNGRLLFWDCDVPDPVQVLQSPQRMTMRCVSVSPTGRYLAICGDFL-VNVFDLRGGVQLMAQGLGHSEPVRDLYWSPDEKQVISVGDDCCICV 719          
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S2SRF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRF7_9STRA)

HSP 1 Score: 237 bits (605), Expect = 5.290e-71
Identity = 107/208 (51.44%), Postives = 148/208 (71.15%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 208
            W +P AHR  VT  A H D+   +LV+G EDG+V VW LR+R+LLL F+EH+K V  VLVDV  P+L+HS+  DC +LTYD+++ERR +AHMTREGAF  +TQRLDSE ELITCD++GRLL WDCD   PVQALQ PS+ ++   S+SP+GR++A+ GD   + + DL    + +     H+  + SV+W+ DE+Q++S  EDC + +
Sbjct:  464 WHLPNAHRGPVTAVATHSDASLSYLVSGGEDGAVRVWSLRSRELLLQFTEHKKPVTRVLVDVKSPHLIHSSSLDCQLLTYDVKRERRTVAHMTREGAFTGLTQRLDSEQELITCDMNGRLLFWDCDVANPVQALQSPSRMKMKFASMSPTGRFLAVCGDFL-VNVFDLTRGIQLIVQAHGHSEPVASVEWSPDEKQIVSVGEDCCVCI 670          
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A835ZHC1_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC1_9STRA)

HSP 1 Score: 213 bits (543), Expect = 7.660e-62
Identity = 106/220 (48.18%), Postives = 142/220 (64.55%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDP-----------SQKRLSCVSVSPSGRYVALGGDEEEIKILDLVN-NCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 208
            W I  AHR AVT  AV  D+   +L+TGSEDG V VW LRTR L+  F+EH++GV AV VDV  P+ VHSAG D T  TYDLRKE+R+  H  R G F S+TQR DSE+ELIT D  G +L WDCD R+PV A +             +  R+ CV+VSPSGR++A  GD+  +K++DL + +   VACG  H+  + ++ W+ DE+Q++S   DC++ V
Sbjct:  480 WAIATAHRGAVTAVAVQLDAAVAYLLTGSEDGEVRVWSLRTRALMAQFAEHKRGVSAVAVDVALPHRVHSAGLDGTTFTYDLRKEQRVGTHAIRGGGFLSLTQRRDSEHELITGDALGDVLAWDCDARDPVMAARSXXXXXXXXXXXXAPPRVRCVAVSPSGRFLAASGDDGVVKVMDLGDEHWRVVACGHGHSDGVAALAWSCDEKQIISGGVDCSICV 699          
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: F0YE13_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE13_AURAN)

HSP 1 Score: 206 bits (524), Expect = 4.470e-60
Identity = 103/213 (48.36%), Postives = 136/213 (63.85%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNC-----EAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 208
            W IP AHR  V+  A H +    +LVTGSEDGSV VW L TR++++ F+EH KGV  ++VD   P L HS G DC V T+DLR E+R ++HM REGAF  ++QR DSE ELITCD +GR+L WDCD  EP+  +       ++CV+VSPSGRY  L  DE  + I +L  N      + +A G AH+  +T VQW+ DERQL+S   D  + +
Sbjct:  349 WAIPTAHRRPVSAIACHVEQKLAYLVTGSEDGSVRVWNLSTREVMMQFAEHHKGVTGLVVDAADPRLFHSGGLDCAVFTHDLRSEKRTVSHMMREGAFTGLSQRKDSERELITCDANGRVLFWDCDVPEPILGVSVDGTT-VACVAVSPSGRYFVLCRDEM-LTIFELDANSATAHPKPIAEGWAHSANVTKVQWSPDERQLVSIGADSCICI 559          
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S3M844_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M844_9STRA)

HSP 1 Score: 198 bits (504), Expect = 9.810e-59
Identity = 91/196 (46.43%), Postives = 128/196 (65.31%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQ 196
            W IP AHR   T  AVH D    + V+G  DG+V VW+   R+L+  ++EH++GV  VL+D+  P +VHS G DC+VL++DL+  RRI+ H+   GA   MTQR DSE EL+T D  GRLL WD D R+PV A+QDPS+  +    +S SGR++A  GD+  +K+LD  N+ + ++ G+ H+  I S+ WT DERQ
Sbjct:  204 WSIPTAHRDGTTSVAVHLDPTLQYFVSGGGDGAVRVWKFSNRELVTQYTEHRRGVSKVLIDIKSPNIVHSVGGDCSVLSFDLKAARRIICHIVNTGAMLDMTQRKDSELELVTADSLGRLLYWDIDIRDPVMAVQDPSRTAIRACEISHSGRFLAFAGDDNALKVLD-TNSQQMISLGQVHSSPILSLTWTPDERQ 398          
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S3ZQS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQS9_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.270e-58
Identity = 101/212 (47.64%), Postives = 139/212 (65.57%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEE----EIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 208
            W IP AHR  V+      ++   +LVTGS DGSV VW L TR++++ F+EH KGV  +L+D  +P+L HSAG+DC   T+D+ KE+R + HM REGAF  +TQR+DSE EL+TCD  GR+L WDCD  EPV ++    Q  ++CV+VSPSG+Y AL  DE     E+ +L      + +A G AH+  ++SVQW+ DERQL+S   D  + V
Sbjct:  487 WTIPTAHRKPVSAITCWVETKLAYLVTGSLDGSVRVWNLSTREMMMQFAEHLKGVTGLLIDAINPHLFHSAGSDCAAFTHDISKEKRTVGHMMREGAFTGLTQRIDSEQELVTCDASGRVLFWDCDAPEPVLSININGQS-VTCVAVSPSGKYFALCRDEMVTVFELNVLATAPP-KCIADGWAHSAVVSSVQWSPDERQLVSIGIDSCICV 696          
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A6G0W6V4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6V4_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.530e-58
Identity = 98/208 (47.12%), Postives = 136/208 (65.38%), Query Frame = 0
Query:    1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 208
            W I  AHR  VT  A +       +V+G+ DG VNVW L TR+LLL F EH++GV  VLVD+T P+ VHS G D  +  YDL+ ERR++ H  REGAFQ+M+QRLDSENE++T    GR+L WDCD  E V+ + DP++  ++ + VSPSGR++A GG++  +K+ D+  +   +A    H+G I  V W+ DERQL+S   DC + V
Sbjct:  408 WHISGAHRGDVTSVAANDK----VIVSGASDGGVNVWSLTTRELLLQFHEHKRGVTQVLVDLTKPHWVHSCGLDRALFIYDLKAERRVVVHQVREGAFQAMSQRLDSENEIVTGGADGRMLFWDCDVTEHVKLMVDPNRTGIASIQVSPSGRFLATGGEDCYVKVFDIQTDA-LLAYALGHSGGIQKVAWSPDERQLVSVGNDCCVCV 610          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM7_ECTSI2.890e-12180.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UWQ1_9STRA2.050e-7954.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2FKB8_9STRA1.340e-7654.81Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2BHX7_9STRA6.610e-7454.81Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SRF7_9STRA5.290e-7151.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZHC1_9STRA7.660e-6248.18Quinon protein alcohol dehydrogenase-like superfam... [more]
F0YE13_AURAN4.470e-6048.36Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3M844_9STRA9.810e-5946.43Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3ZQS9_9STRA1.270e-5847.64Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6G0W6V4_9STRA4.530e-5847.12Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 171..205
e-value: 11.0
score: 10.4
coord: 84..124
e-value: 350.0
score: 1.0
coord: 3..38
e-value: 0.17
score: 21.0
coord: 41..81
e-value: 3.7
score: 13.4
coord: 127..167
e-value: 3.2
score: 13.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 5..37
e-value: 3.8E-4
score: 21.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 178..208
score: 9.138
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 4..47
score: 11.411
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 100..208
e-value: 1.2E-17
score: 66.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..99
e-value: 8.0E-17
score: 63.3
NoneNo IPR availablePANTHERPTHR13720:SF46coord: 1..208
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 1..208
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 25..39
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 4..208
score: 23.756
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9540contigH-elongata_contig9540:6037..7622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9540.16946.1mRNA_H-elongata_contig9540.16946.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9540 6037..7622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9540.16946.1 ID=prot_H-elongata_contig9540.16946.1|Name=mRNA_H-elongata_contig9540.16946.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=208bp
WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSE
HQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQS
MTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPS
GRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSA
AEDCTLAV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf