mRNA_H-elongata_contig9540.16946.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: D8LRM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM7_ECTSI) HSP 1 Score: 357 bits (915), Expect = 2.890e-121 Identity = 167/208 (80.29%), Postives = 185/208 (88.94%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 624
W IP+AHR AVTCCAV +DS A FLVTG+EDGSV+VW LRTR+LLL FSEHQKGV VLVDV P LVHSAG DCTVLTYDLRKE+R +AHMTR GAFQ MTQR+DSENELITCD+HGRLL WDCDY PVQA+QDPS++RLSCVSVSPSGRY+ALGGD+E +K+LDL NCE VACGRAHAGAITSVQWTRDERQL+SAAEDCTLA+
Sbjct: 137 WAIPKAHRAAVTCCAVRFDSSASFLVTGAEDGSVSVWSLRTRELLLRFSEHQKGVTTVLVDVASPNLVHSAGTDCTVLTYDLRKEKRTVAHMTRGGAFQGMTQRIDSENELITCDIHGRLLTWDCDYPAPVQAMQDPSKQRLSCVSVSPSGRYMALGGDDELVKVLDLATNCETVACGRAHAGAITSVQWTRDERQLISAAEDCTLAI 344
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S2UWQ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ1_9STRA) HSP 1 Score: 259 bits (661), Expect = 2.050e-79 Identity = 113/208 (54.33%), Postives = 157/208 (75.48%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 624
W IP AHR A+T AVH+D G++VTG++DG+V +W LR+R++LL F+EHQKGV V+VDV P LVHSAG DC VLTYD++KERR +AHM REGAF ++QR+DSE EL+TCD GR+ WDCD + P QALQDPS+ R+ VSVSPSG ++A+GG++ +K+LDL + + +A GR H+ ++ V W+ DE+Q++S +DC + +
Sbjct: 452 WHIPNAHRAAITSLAVHHDERLGYIVTGAKDGAVRLWNLRSREMLLQFTEHQKGVSKVIVDVRLPKLVHSAGLDCAVLTYDIQKERRTVAHMVREGAFLGLSQRVDSEQELVTCDAAGRIFFWDCDVQGPTQALQDPSRDRIRAVSVSPSGHFMAIGGEDHLVKVLDLTADGDILAVGRGHSAPVSDVFWSPDEKQIISIGDDCCVCI 659
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S2FKB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKB8_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.340e-76 Identity = 114/208 (54.81%), Postives = 149/208 (71.63%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 624
WEIP AHR AVT A H D+ ++++G EDGSV +W LR+R+L+L F EH+KGV VLVDV P LVHSAG DC+V TYDLRKERR +AHM REGAF +TQRLDSE EL+TCD++GRLL WDCD +PVQ LQ P + + CVSVSP+GRY+A+ GD + + DL + +A G H+ + + W+ DE+Q++S +DC + V
Sbjct: 234 WEIPNAHRGAVTTVATHSDASLSYVLSGGEDGSVRIWALRSRELMLQFVEHKKGVSQVLVDVKSPNLVHSAGLDCSVFTYDLRKERRCVAHMVREGAFTGLTQRLDSEQELVTCDMNGRLLFWDCDVPDPVQVLQSPQRMTMRCVSVSPTGRYLAICGDFL-VNVFDLRGGVQLMAQGLGHSEPVRDLYWSPDEKQVISVGDDCCICV 440
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S2BHX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHX7_9STRA) HSP 1 Score: 246 bits (627), Expect = 6.610e-74 Identity = 114/208 (54.81%), Postives = 149/208 (71.63%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 624
WEIP AHR AVT A H D+ ++++G EDGSV +W LR+R+L+L F EH+KGV VLVDV P LVHSAG DC+V TYDLRKERR +AHM REGAF +TQRLDSE EL+TCD++GRLL WDCD +PVQ LQ P + + CVSVSP+GRY+A+ GD + + DL + +A G H+ + + W+ DE+Q++S +DC + V
Sbjct: 513 WEIPNAHRGAVTTVATHSDASLSYVLSGGEDGSVRIWALRSRELMLQFVEHKKGVSQVLVDVKSPNLVHSAGLDCSVFTYDLRKERRCVAHMVREGAFTGLTQRLDSEQELVTCDMNGRLLFWDCDVPDPVQVLQSPQRMTMRCVSVSPTGRYLAICGDFL-VNVFDLRGGVQLMAQGLGHSEPVRDLYWSPDEKQVISVGDDCCICV 719
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S2SRF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRF7_9STRA) HSP 1 Score: 237 bits (605), Expect = 5.290e-71 Identity = 107/208 (51.44%), Postives = 148/208 (71.15%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 624
W +P AHR VT A H D+ +LV+G EDG+V VW LR+R+LLL F+EH+K V VLVDV P+L+HS+ DC +LTYD+++ERR +AHMTREGAF +TQRLDSE ELITCD++GRLL WDCD PVQALQ PS+ ++ S+SP+GR++A+ GD + + DL + + H+ + SV+W+ DE+Q++S EDC + +
Sbjct: 464 WHLPNAHRGPVTAVATHSDASLSYLVSGGEDGAVRVWSLRSRELLLQFTEHKKPVTRVLVDVKSPHLIHSSSLDCQLLTYDVKRERRTVAHMTREGAFTGLTQRLDSEQELITCDMNGRLLFWDCDVANPVQALQSPSRMKMKFASMSPTGRFLAVCGDFL-VNVFDLTRGIQLIVQAHGHSEPVASVEWSPDEKQIVSVGEDCCVCI 670
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A835ZHC1_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC1_9STRA) HSP 1 Score: 213 bits (543), Expect = 7.660e-62 Identity = 106/220 (48.18%), Postives = 142/220 (64.55%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDP-----------SQKRLSCVSVSPSGRYVALGGDEEEIKILDLVN-NCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 624
W I AHR AVT AV D+ +L+TGSEDG V VW LRTR L+ F+EH++GV AV VDV P+ VHSAG D T TYDLRKE+R+ H R G F S+TQR DSE+ELIT D G +L WDCD R+PV A + + R+ CV+VSPSGR++A GD+ +K++DL + + VACG H+ + ++ W+ DE+Q++S DC++ V
Sbjct: 480 WAIATAHRGAVTAVAVQLDAAVAYLLTGSEDGEVRVWSLRTRALMAQFAEHKRGVSAVAVDVALPHRVHSAGLDGTTFTYDLRKEQRVGTHAIRGGGFLSLTQRRDSEHELITGDALGDVLAWDCDARDPVMAARSXXXXXXXXXXXXAPPRVRCVAVSPSGRFLAASGDDGVVKVMDLGDEHWRVVACGHGHSDGVAALAWSCDEKQIISGGVDCSICV 699
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: F0YE13_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE13_AURAN) HSP 1 Score: 206 bits (524), Expect = 4.470e-60 Identity = 103/213 (48.36%), Postives = 136/213 (63.85%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNC-----EAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 624
W IP AHR V+ A H + +LVTGSEDGSV VW L TR++++ F+EH KGV ++VD P L HS G DC V T+DLR E+R ++HM REGAF ++QR DSE ELITCD +GR+L WDCD EP+ + ++CV+VSPSGRY L DE + I +L N + +A G AH+ +T VQW+ DERQL+S D + +
Sbjct: 349 WAIPTAHRRPVSAIACHVEQKLAYLVTGSEDGSVRVWNLSTREVMMQFAEHHKGVTGLVVDAADPRLFHSGGLDCAVFTHDLRSEKRTVSHMMREGAFTGLSQRKDSERELITCDANGRVLFWDCDVPEPILGVSVDGTT-VACVAVSPSGRYFVLCRDEM-LTIFELDANSATAHPKPIAEGWAHSANVTKVQWSPDERQLVSIGADSCICI 559
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S3M844_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M844_9STRA) HSP 1 Score: 198 bits (504), Expect = 9.810e-59 Identity = 91/196 (46.43%), Postives = 128/196 (65.31%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQ 588
W IP AHR T AVH D + V+G DG+V VW+ R+L+ ++EH++GV VL+D+ P +VHS G DC+VL++DL+ RRI+ H+ GA MTQR DSE EL+T D GRLL WD D R+PV A+QDPS+ + +S SGR++A GD+ +K+LD N+ + ++ G+ H+ I S+ WT DERQ
Sbjct: 204 WSIPTAHRDGTTSVAVHLDPTLQYFVSGGGDGAVRVWKFSNRELVTQYTEHRRGVSKVLIDIKSPNIVHSVGGDCSVLSFDLKAARRIICHIVNTGAMLDMTQRKDSELELVTADSLGRLLYWDIDIRDPVMAVQDPSRTAIRACEISHSGRFLAFAGDDNALKVLD-TNSQQMISLGQVHSSPILSLTWTPDERQ 398
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A7S3ZQS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQS9_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.270e-58 Identity = 101/212 (47.64%), Postives = 139/212 (65.57%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEE----EIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 624
W IP AHR V+ ++ +LVTGS DGSV VW L TR++++ F+EH KGV +L+D +P+L HSAG+DC T+D+ KE+R + HM REGAF +TQR+DSE EL+TCD GR+L WDCD EPV ++ Q ++CV+VSPSG+Y AL DE E+ +L + +A G AH+ ++SVQW+ DERQL+S D + V
Sbjct: 487 WTIPTAHRKPVSAITCWVETKLAYLVTGSLDGSVRVWNLSTREMMMQFAEHLKGVTGLLIDAINPHLFHSAGSDCAAFTHDISKEKRTVGHMMREGAFTGLTQRIDSEQELVTCDASGRVLFWDCDAPEPVLSININGQS-VTCVAVSPSGKYFALCRDEMVTVFELNVLATAPP-KCIADGWAHSAVVSSVQWSPDERQLVSIGIDSCICV 696
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Match: A0A6G0W6V4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6V4_9STRA) HSP 1 Score: 202 bits (513), Expect = 4.530e-58 Identity = 98/208 (47.12%), Postives = 136/208 (65.38%), Query Frame = 1
Query: 1 WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEHQKGVRAVLVDVTHPYLVHSAGADCTVLTYDLRKERRIMAHMTREGAFQSMTQRLDSENELITCDVHGRLLIWDCDYREPVQALQDPSQKRLSCVSVSPSGRYVALGGDEEEIKILDLVNNCEAVACGRAHAGAITSVQWTRDERQLLSAAEDCTLAV 624
W I AHR VT A + +V+G+ DG VNVW L TR+LLL F EH++GV VLVD+T P+ VHS G D + YDL+ ERR++ H REGAFQ+M+QRLDSENE++T GR+L WDCD E V+ + DP++ ++ + VSPSGR++A GG++ +K+ D+ + +A H+G I V W+ DERQL+S DC + V
Sbjct: 408 WHISGAHRGDVTSVAANDK----VIVSGASDGGVNVWSLTTRELLLQFHEHKRGVTQVLVDLTKPHWVHSCGLDRALFIYDLKAERRVVVHQVREGAFQAMSQRLDSENEIVTGGADGRMLFWDCDVTEHVKLMVDPNRTGIASIQVSPSGRFLATGGEDCYVKVFDIQTDA-LLAYALGHSGGIQKVAWSPDERQLVSVGNDCCVCV 610 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9540.16946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9540.16946.1 >prot_H-elongata_contig9540.16946.1 ID=prot_H-elongata_contig9540.16946.1|Name=mRNA_H-elongata_contig9540.16946.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=208bp WEIPQAHRTAVTCCAVHYDSPAGFLVTGSEDGSVNVWELRTRKLLLGFSEback to top mRNA from alignment at H-elongata_contig9540:6037..7622+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9540.16946.1 ID=mRNA_H-elongata_contig9540.16946.1|Name=mRNA_H-elongata_contig9540.16946.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1586bp|location=Sequence derived from alignment at H-elongata_contig9540:6037..7622+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9540:6037..7622+ >mRNA_H-elongata_contig9540.16946.1 ID=mRNA_H-elongata_contig9540.16946.1|Name=mRNA_H-elongata_contig9540.16946.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1248bp|location=Sequence derived from alignment at H-elongata_contig9540:6037..7622+ (Himanthalia elongata Himel1 dioecious)back to top |