prot_H-elongata_contig95344.16942.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95344.16942.1
Unique Nameprot_H-elongata_contig95344.16942.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length79
Homology
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: A0A6H5KCM6_9PHAE (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM6_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 4.010e-38
Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = 0
Query:    5 QLRRLFCVLSRYETLSATSDGYQMAFPAAGFRLLRQLLAVECECFASPLNNTLPSRFCSVAFDADKFFGSEGNFF 79
            QLRRLFCVLSRYETLSATSDGYQMAFPA+GFRLLR L++V+CECFASPLN TL SRFCSVA+D DKFFGSEGNFF
Sbjct:   36 QLRRLFCVLSRYETLSATSDGYQMAFPASGFRLLRHLVSVDCECFASPLNCTL-SRFCSVAYDTDKFFGSEGNFF 109          
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: D7FSB3_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB3_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 9.310e-35
Identity = 65/74 (87.84%), Postives = 70/74 (94.59%), Query Frame = 0
Query:    6 LRRLFCVLSRYETLSATSDGYQMAFPAAGFRLLRQLLAVECECFASPLNNTLPSRFCSVAFDADKFFGSEGNFF 79
            LRRLFCVLSRYETLSATSDGYQMAFPA+GFRLLR L++V+CECFASPLN TL SRFCSVA+D DKFFGSEGNFF
Sbjct:  413 LRRLFCVLSRYETLSATSDGYQMAFPASGFRLLRHLVSVDCECFASPLNCTL-SRFCSVAYDTDKFFGSEGNFF 485          
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: A0A7S0VBN6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VBN6_9CHLO)

HSP 1 Score: 73.6 bits (179), Expect = 1.780e-13
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    9 LFCVLSRYETLSATSD---GYQMAFPAAGFRLLRQLLAVECECFASPLNNTLPSRFCSVAFDADKFFGSEGNFF 79
            ++CVL RY +L+       G+QMA P   +  LR    ++ ECFASPLN TLP +FCS  FD D+ FGS+GNFF
Sbjct:  433 IWCVLHRYNSLAGPEGHGGGWQMAMPPPVYEYLRHTFQIQVECFASPLNCTLP-KFCSAFFDTDEPFGSQGNFF 505          
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: A0A6T8JQC7_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8JQC7_HEMAN)

HSP 1 Score: 71.2 bits (173), Expect = 9.970e-13
Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 0
Query:    8 RLFCVLSRYETLSATSDGYQMAFPAAGFRLLRQLLAVECECFASPLNNTLPSRFCSVAFDADKFFGSEGNFF 79
            RLFC+L RYE++  T  GYQ + P A F  L+    VE ECFASPLN TLPS + S   D D FFGS G+FF
Sbjct:  174 RLFCLLQRYESIGGT--GYQASAPKAVFDCLKDEFGVEHECFASPLNCTLPS-WGSAFKDTDSFFGSHGSFF 242          
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: A0A7J6LN67_PEROL (mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LN67_PEROL)

HSP 1 Score: 71.2 bits (173), Expect = 1.060e-12
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    7 RRLFCVLSRYETL----SATSDGYQMAFPAAGFRLLRQLLAVECECFASPLNNTLPSRFCSVAFDADKFFGSEGNFF 79
            +R++ +L RY TL    S    G+Q+A PAA   L++    V  ECFASPLN T+PS FCS+ +D D+FFGS G+FF
Sbjct:  200 QRIWLLLHRYNTLFGSKSGEGRGWQLATPAAAMELMKVRCDVTHECFASPLNATMPS-FCSLFYDTDRFFGSVGSFF 275          
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: A0A7J6NNL3_PEROL (mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NNL3_PEROL)

HSP 1 Score: 70.9 bits (172), Expect = 1.490e-12
Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    8 RLFCVLSRYETL----SATSDGYQMAFPAAGFRLLRQLLAVECECFASPLNNTLPSRFCSVAFDADKFFGSEGNFF 79
            R++ +L RY TL    S    G+Q+A PAA   L++    V  ECFASPLN T+PS FCS+ +D D+FFGS G+FF
Sbjct:  217 RIWLLLHRYNTLFGSKSGEGRGWQLATPAAAMELMKVRYDVTHECFASPLNATMPS-FCSLFYDTDRFFGSVGSFF 291          
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: C5KBX9_PERM5 (PCIF1_WW domain-containing protein (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KBX9_PERM5)

HSP 1 Score: 68.6 bits (166), Expect = 2.540e-12
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    7 RRLFCVLSRYETLSATS----DGYQMAFPAAGFRLLRQLLAVECECFASPLNNTLPSRFCSVAFDADKFFGSEGNFF 79
            +R++ +L RY TL  +      G+Q+A PA    L++    V  ECFASPLN T+PS FCS+ +D D+FFGS G+FF
Sbjct:   12 QRIWLLLHRYNTLFGSKCGEGRGWQLATPAEAMELMQVRYGVSHECFASPLNATMPS-FCSLFYDTDRFFGSVGSFF 87          
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: A0A482S948_9ARCH (PCIF1_WW domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S948_9ARCH)

HSP 1 Score: 62.0 bits (149), Expect = 2.690e-11
Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0
Query:   12 VLSRYETLSATSDGYQMAFPAAGFRLLRQLLAVECECFASPLN 54
            +LSRYETLS  S+GYQMAFP  GF  LR+   V  ECFASPLN
Sbjct:    1 MLSRYETLSGKSEGYQMAFPDVGFAYLRETWGVNTECFASPLN 43          
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: A0A7S1X499_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X499_9CHLO)

HSP 1 Score: 64.3 bits (155), Expect = 2.990e-10
Identity = 38/71 (53.52%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    9 LFCVLSRYETLSATSDGYQMAFPAAGFRLLRQLLAVECECFASPLNNTLPSRFCSVAFDADKFFGSEGNFF 79
            L+C+L+RYE LS    GYQ A   AGFR LR  +AV+ ECFASPLN       CS   D D  FGS G+FF
Sbjct:  210 LWCLLARYEALSG--HGYQAALCEAGFRALRSAMAVDFECFASPLNCHYGPH-CSAFPDTDAPFGSLGSFF 277          
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Match: A0A196SNR9_BLAHN (PCIF1_WW domain-containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SNR9_BLAHN)

HSP 1 Score: 64.3 bits (155), Expect = 3.190e-10
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 0
Query:    9 LFCVLSRYETLSATSDGYQMAFPAAGFRLLRQLLAVECECFASPLNN-TLPSRFCSVAFDADKFFGSEGNFF 79
            L  +L RY T+S T  GYQMA P + F LL+    ++ ECFASP+N+  L + +CS   D D  FGS+G+FF
Sbjct:  245 LLLLLLRYNTISGTVRGYQMALPTSVFELLQSKYHLQHECFASPMNSCALLNSYCSRFRDTDAPFGSKGSFF 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95344.16942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5KCM6_9PHAE4.010e-3888.00PCIF1_WW domain-containing protein n=1 Tax=Ectocar... [more]
D7FSB3_ECTSI9.310e-3587.84PCIF1_WW domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S0VBN6_9CHLO1.780e-1350.00Hypothetical protein (Fragment) n=1 Tax=Polytomell... [more]
A0A6T8JQC7_HEMAN9.970e-1355.56Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7J6LN67_PEROL1.060e-1249.35mRNA (2'-O-methyladenosine-N(6)-)-methyltransferas... [more]
A0A7J6NNL3_PEROL1.490e-1250.00mRNA (2'-O-methyladenosine-N(6)-)-methyltransferas... [more]
C5KBX9_PERM52.540e-1246.75PCIF1_WW domain-containing protein (Fragment) n=1 ... [more]
A0A482S948_9ARCH2.690e-1167.44PCIF1_WW domain-containing protein n=1 Tax=archaeo... [more]
A0A7S1X499_9CHLO2.990e-1053.52Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A196SNR9_BLAHN3.190e-1047.22PCIF1_WW domain-containing protein n=1 Tax=Blastoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022035PCIF1, WW domainPFAMPF12237PCIF1_WWcoord: 6..79
e-value: 2.8E-22
score: 79.1
NoneNo IPR availablePANTHERPTHR21727:SF0PHOSPHORYLATED CTD-INTERACTING FACTOR 1coord: 5..79
IPR039881mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase PCIF1-likePANTHERPTHR21727PHOSPHORYLATED CTD INTERACTING FACTOR 1coord: 5..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95344contigH-elongata_contig95344:1195..2039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95344.16942.1mRNA_H-elongata_contig95344.16942.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95344 1195..2039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95344.16942.1 ID=prot_H-elongata_contig95344.16942.1|Name=mRNA_H-elongata_contig95344.16942.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp
STVHQLRRLFCVLSRYETLSATSDGYQMAFPAAGFRLLRQLLAVECECFA
SPLNNTLPSRFCSVAFDADKFFGSEGNFF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022035PCIF1_WW
IPR039881PCIF1-like