mRNA_H-elongata_contig94862.16901.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE) HSP 1 Score: 110 bits (276), Expect = 1.760e-26 Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIVTVRGVVAFGVLDKY 267
EVLRYRG+ ++P NPL WW+ ATF LL EL+ R+L +PASSA+ ERLFSKA L T R+ L G RVAQ+VT+RG VA GVLDKY
Sbjct: 486 EVLRYRGVTSMNPDGNPLTWWDQHKATFPLLRELSHRILCVPASSAASERLFSKAGLTLTKQRSLLAGNRVAQLVTLRGAVAAGVLDKY 574
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: A0A1A8HNA6_NOTKU (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8HNA6_NOTKU) HSP 1 Score: 59.7 bits (143), Expect = 5.500e-10 Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 22 MPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIV 225
MP++DP +PL+WW++ + F L LA + LSIPA+SA ERLFS A V T R LK V +++
Sbjct: 2 MPEVDPDTDPLQWWKSNKSNFSRLSHLAKKYLSIPATSAPSERLFSVAGGVVTCSRACLKPEAVDRLI 69
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: A0A1A8RC75_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8RC75_9TELE) HSP 1 Score: 62.0 bits (149), Expect = 5.940e-10 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIV 225
E+ Y +P++DP +PL+WW++ + F L LA + LSIPA+SA ERLFS A V T R LK V +++
Sbjct: 88 ELATYLLLPEVDPDTDPLQWWKSNTSNFSRLSHLAKKYLSIPATSAPSERLFSVAGGVVTCSRACLKPEAVDRLI 162
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: UPI000DC13F08 (zinc finger BED domain-containing protein 1-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC13F08) HSP 1 Score: 62.4 bits (150), Expect = 1.160e-9 Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIVTVR 234
E RY P+++ ENP WW+ + + + LA ++L IPASSAS ER+FS+A + T RNK+ ++ +V ++
Sbjct: 162 EFTRYLSEPQINHNENPCLWWKARENVYPTISVLAKKILCIPASSASSERVFSRAGNIITPKRNKMTPHHLSALVFLK 239
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: A0A6J1T6I8_FRAOC (uncharacterized protein LOC113213631 n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1T6I8_FRAOC) HSP 1 Score: 63.2 bits (152), Expect = 1.200e-9 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKE--NPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIVTVRGV 240
E+ RY MP + K+ NP+E+ ET F + E+A VL I A+S ERLFS A L+ T LRN+L G +V ++V +R V
Sbjct: 326 ELQRYLDMPNCNRKKFPNPIEYLETIKDKFPYIYEVAREVLPIVATSTPCERLFSHAGLIFTQLRNRLHGSKVDELVFLRSV 407
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: A0A1A8NAT3_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8NAT3_9TELE) HSP 1 Score: 62.0 bits (149), Expect = 1.320e-9 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIV 225
E+ Y +P++DP +PL+WW++ + F L LA + LSIPA+SA ERLFS A V T R LK V +++
Sbjct: 143 ELATYLLLPEVDPDTDPLQWWKSNKSNFSRLSHLAKKYLSIPATSAPSERLFSVAGGVVTCSRACLKPEAVDRLI 217
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: UPI001BD4F48F (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD4F48F) HSP 1 Score: 61.6 bits (148), Expect = 4.320e-9 Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIV 225
EV Y MP + +++PL+WW+ + F L +LA +VL +PA+S S ERLFS + + T R+ L ++ +V
Sbjct: 445 EVSAYTSMPTIPVEKDPLQWWKANEDEFPRLAKLARKVLCVPATSVSSERLFSSSGNIQTVFRSSLTPDKLNMLV 519
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: UPI0014461CE7 (zinc finger BED domain-containing protein DAYSLEEPER-like n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI0014461CE7) HSP 1 Score: 59.7 bits (143), Expect = 4.340e-9 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIV 225
E+ Y LD +ENPL+WW + L +LA + LSIPA+SA ER+FS + T LR+ LK V ++V
Sbjct: 85 ELQSYLQCADLDSEENPLDWWREHQRVYPRLSKLAKKYLSIPATSAPSERVFSTGGNIVTCLRSSLKPESVDRLV 159
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: A0A836J761_9HYME (ZBED1 protein (Fragment) n=1 Tax=Acromyrmex insinuator TaxID=230686 RepID=A0A836J761_9HYME) HSP 1 Score: 60.5 bits (145), Expect = 9.540e-9 Identity = 28/80 (35.00%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIVTVRGV 240
E+ +Y + NPLE+W+T A + L ++A + L++ A+S ERLFSKA L+ +++RN+LK R+ + ++ V
Sbjct: 233 ELRQYLHQSVIPRHSNPLEYWQTLKAVYPTLFKIAKQYLAVVATSVPTERLFSKAGLIKSDIRNRLKSSRLNSLFFLQSV 312
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Match: A0A151IMY6_9HYME (Zinc finger BED domain-containing protein 4 (Fragment) n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151IMY6_9HYME) HSP 1 Score: 60.1 bits (144), Expect = 1.220e-8 Identity = 27/80 (33.75%), Postives = 51/80 (63.75%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELVSTNLRNKLKGPRVAQIVTVRGV 240
E+ +Y + NPL++W+T A + +L ++A + L++ A+S ERLFSKA L+ +++RN+LK R+ ++ ++ V
Sbjct: 216 ELRQYLHQSVIPRHSNPLQYWQTLKAIYPILFKIAKQYLAVVATSVPAERLFSKAGLIKSDIRNRLKPSRLNSLLFLQSV 295 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94862.16901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig94862.16901.1 >prot_H-elongata_contig94862.16901.1 ID=prot_H-elongata_contig94862.16901.1|Name=mRNA_H-elongata_contig94862.16901.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp MPKLDPKENPLEWWETTDATFLLLCELATRVLSIPASSASPERLFSKAELback to top mRNA from alignment at H-elongata_contig94862:678..947- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig94862.16901.1 ID=mRNA_H-elongata_contig94862.16901.1|Name=mRNA_H-elongata_contig94862.16901.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=270bp|location=Sequence derived from alignment at H-elongata_contig94862:678..947- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig94862:678..947- >mRNA_H-elongata_contig94862.16901.1 ID=mRNA_H-elongata_contig94862.16901.1|Name=mRNA_H-elongata_contig94862.16901.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at H-elongata_contig94862:678..947- (Himanthalia elongata Himel1 dioecious)back to top |