mRNA_H-elongata_contig9471.16885.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig9471.16885.1
Unique NamemRNA_H-elongata_contig9471.16885.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A6H5JIE6_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE6_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.630e-37
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTRE 498
            RRKDVDQIQDEL  EEEKGEE  FEVDDDLPGQGQFYCTPCARHFTD++T+  H++SKLHKRR+KDVAQEQYTQ EAERGAGMT+E
Sbjct:   31 RRKDVDQIQDELMVEEEKGEEMVFEVDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKE 116
[Close]
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A024G9F2_9STRA (C2H2-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9F2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 6.890e-31
Identity = 61/93 (65.59%), Postives = 76/93 (81.72%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 519
            R +DVDQIQD+L+ E ++ +   FE+D+DLPG GQ+YCTPCARHF D  TR +HV++K+HKRRLKDV QEQYTQ EA+ GAG TRE+Y PAHP
Sbjct:   27 RSRDVDQIQDDLKLESQQNKPLKFEIDEDLPGLGQYYCTPCARHFIDATTRDLHVRTKVHKRRLKDVRQEQYTQREADLGAGKTREEYVPAHP 119
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BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A662Y0F3_9STRA (C2H2-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0F3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.930e-30
Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 519
            R +DVDQIQD+LR E+ KG+   FE D+DLPG GQFYCTPC RHF D  TR VH+K+K+HKRRLKDVAQ+QYTQ EA  GAG T E Y PAHP
Sbjct:   28 RSRDVDQIQDDLRVEKLKGKPLAFEEDEDLPGLGQFYCTPCGRHFIDAITRDVHIKTKVHKRRLKDVAQKQYTQKEAMLGAGKTVETYTPAHP 120
[Close]
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: W2FRC2_PHYPR (C2H2-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2FRC2_PHYPR)

HSP 1 Score: 124 bits (310), Expect = 9.590e-30
Identity = 62/93 (66.67%), Postives = 74/93 (79.57%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 519
            R +D+DQIQD+LR E+  G+   FE D+DLPG GQFYCTPC RHF D KTR VH+K+K+HKRRLKDVAQ+QYTQ+EA +GAG   E Y PAHP
Sbjct:   29 RARDIDQIQDDLRVEKLTGKSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMQGAGKGVETYKPAHP 121
[Close]
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A8K1FHU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHU3_PYTOL)

HSP 1 Score: 123 bits (309), Expect = 1.200e-29
Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPP 510
            R +D+DQIQD+L+ E+  G+  +FEVD+DLPG GQ+YCTPC RHF D KTR VH+K KLHKRR+KDVAQEQYTQ EAE GAG + EKY P
Sbjct:   27 RGRDIDQIQDDLKLEKLSGKAMSFEVDEDLPGLGQYYCTPCGRHFIDAKTRDVHIKGKLHKRRMKDVAQEQYTQAEAEAGAGRSVEKYVP 116
[Close]
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A024UJ99_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJ99_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.510e-29
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 519
            R +D+DQIQD+L+ EEE G +  FE+D+DLPG GQ+YCTPC RHF     R VH+ SK+HKRR+KDVAQEQYTQ EAER AG + E Y PAHP
Sbjct:   27 RSRDIDQIQDDLKKEEETGVKMTFELDEDLPGLGQYYCTPCGRHFITANARDVHIASKVHKRRMKDVAQEQYTQKEAERAAGKSIETYTPAHP 119
[Close]
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A3R7IPL6_9STRA (C2H2-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IPL6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.310e-29
Identity = 62/93 (66.67%), Postives = 73/93 (78.49%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 519
            R +D+DQIQD+L  E   G++  FE D+DLPG GQFYCTPC RHF D  TR VHVK+K+HKRRLKDVAQ+QYTQ+EA  GAG + EKY PAHP
Sbjct:   29 RSRDIDQIQDDLCVETISGKKMAFEEDEDLPGLGQFYCTPCGRHFIDATTRDVHVKTKVHKRRLKDVAQKQYTQNEAMMGAGKSVEKYTPAHP 121
[Close]
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A0P1ACD5_PLAHL (Zinc finger protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACD5_PLAHL)

HSP 1 Score: 122 bits (305), Expect = 4.680e-29
Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAH 516
            R +D+DQIQD+LR E+  G+ TNFE D+DLPG GQFYCTPC RHF D KTR VH+K+K+HKRRLKDVAQ+QYTQ+EA + AG   E Y  AH
Sbjct:   29 RARDIDQIQDDLRVEKMTGKTTNFEEDEDLPGLGQFYCTPCGRHFIDSKTRDVHLKTKVHKRRLKDVAQKQYTQNEANQAAGKGIETYKLAH 120
[Close]
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A329S597_9STRA (C2H2-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S597_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.430e-29
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 519
            R +D+DQIQD+L  E+  G+   FE D+DLPG GQFYCTPC RHF D KTR VH+K+K+HKRRLKDVAQ+QYTQ+EA  GAG   E Y PAHP
Sbjct:   29 RARDIDQIQDDLSVEKMTGKSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMEGAGKGIETYKPAHP 121
[Close]
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: F0WBU9_9STRA (Uncharacterized protein AlNc14C53G4140 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBU9_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.110e-28
Identity = 58/93 (62.37%), Postives = 74/93 (79.57%), Query Frame = 1 
Query:  241 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 519
            R +DVDQIQD+L+ E ++ +   FE+D+DLPG GQ+YCTPCARHF D  TR +H+++K+HKRRLKDV QEQYTQ EA+ GAG TRE+Y  A P
Sbjct:   27 RHRDVDQIQDDLKLETQQKKPLKFEIDEDLPGLGQYYCTPCARHFIDASTRELHIRTKVHKRRLKDVLQEQYTQREADLGAGKTREQYEAARP 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIE6_9PHAE3.630e-3783.72C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A024G9F2_9STRA6.890e-3165.59C2H2-type domain-containing protein n=1 Tax=Albugo... [more]
A0A662Y0F3_9STRA4.930e-3068.82C2H2-type domain-containing protein n=1 Tax=Nothop... [more]
W2FRC2_PHYPR9.590e-3066.67C2H2-type domain-containing protein n=9 Tax=Phytop... [more]
A0A8K1FHU3_PYTOL1.200e-2967.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UJ99_9STRA1.510e-2964.52C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
A0A3R7IPL6_9STRA3.310e-2966.67C2H2-type domain-containing protein n=3 Tax=Phytop... [more]
A0A0P1ACD5_PLAHL4.680e-2966.30Zinc finger protein n=1 Tax=Plasmopara halstedii T... [more]
A0A329S597_9STRA6.430e-2965.59C2H2-type domain-containing protein n=1 Tax=Phytop... [more]
F0WBU9_9STRA1.110e-2862.37Uncharacterized protein AlNc14C53G4140 n=1 Tax=Alb... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9471contigH-elongata_contig9471:2292..8209 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score160.2
Seed ortholog evalue1e-36
Seed eggNOG ortholog2880.D7FMT7
Preferred nameZNF593
KEGG rclassRC00055,RC00523
KEGG koko:K01875,ko:K14821
KEGG ReactionR03662,R08218
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000054,GO:0000055,GO:0000278,GO:0000281,GO:0000282,GO:0000910,GO:0000981,GO:0003674,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006355,GO:0006357,GO:0006403,GO:0006405,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0007049,GO:0007163,GO:0008104,GO:0008150,GO:0008270,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015031,GO:0015833,GO:0015931,GO:0019219,GO:0019222,GO:0022402,GO:0022613,GO:0030010,GO:0030684,GO:0030687,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033750,GO:0034613,GO:0042254,GO:0042886,GO:0043021,GO:0043023,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043392,GO:0044085,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045893,GO:0045935,GO:0045944,GO:0046872,GO:0046907,GO:0046914,GO:0048518,GO:0048522,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051098,GO:0051100,GO:0051101,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0051254,GO:0051301,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0061640,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0140110,GO:1902680,GO:1903025,GO:1903026,GO:1903047,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2000677,GO:2000678,GO:2001141
EggNOG free text desc.ribosomal large subunit binding
EggNOG OGsCOG5112@1,KOG3408@2759
EC6.1.1.11
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03009,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionU1 zinc finger protein
Ec32 orthologEc-21_000210.1
Exons4
Model size1861
Cds size609
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9471.16885.1prot_H-elongata_contig9471.16885.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig9471 2292..6957 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931342.3980265-CDS-H-elongata_contig9471:2291..23871622931342.3980265-CDS-H-elongata_contig9471:2291..2387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9471 2292..2387 +
1691679797.4075484-CDS-H-elongata_contig9471:2291..23871691679797.4075484-CDS-H-elongata_contig9471:2291..2387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9471 2292..2387 +
1622931342.411725-CDS-H-elongata_contig9471:4177..43231622931342.411725-CDS-H-elongata_contig9471:4177..4323Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9471 4178..4323 +
1691679797.4179392-CDS-H-elongata_contig9471:4177..43231691679797.4179392-CDS-H-elongata_contig9471:4177..4323Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9471 4178..4323 +
1622931342.4297135-CDS-H-elongata_contig9471:5657..58431622931342.4297135-CDS-H-elongata_contig9471:5657..5843Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9471 5658..5843 +
1691679797.4259965-CDS-H-elongata_contig9471:5657..58431691679797.4259965-CDS-H-elongata_contig9471:5657..5843Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9471 5658..5843 +
1622931342.4450011-CDS-H-elongata_contig9471:6776..69571622931342.4450011-CDS-H-elongata_contig9471:6776..6957Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9471 6777..6957 +
1691679797.4341784-CDS-H-elongata_contig9471:6776..69571691679797.4341784-CDS-H-elongata_contig9471:6776..6957Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9471 6777..6957 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931342.4639413-UTR-H-elongata_contig9471:6957..82091622931342.4639413-UTR-H-elongata_contig9471:6957..8209Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9471 6958..8209 +
1691679797.444277-UTR-H-elongata_contig9471:6957..82091691679797.444277-UTR-H-elongata_contig9471:6957..8209Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9471 6958..8209 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig9471.16885.1

>prot_H-elongata_contig9471.16885.1 ID=prot_H-elongata_contig9471.16885.1|Name=mRNA_H-elongata_contig9471.16885.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
MVTKTLLPRDLNESRQRRAAGVEAIEEGDAFWVSVEWRVAEISRRVAGDG
CWPAQIEGEQRGTQGQEQGVQEGARNQKQVRRKDVDQIQDELRTEEEKGE
ETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQE
QYTQDEAERGAGMTREKYPPAHPAVFETATVAEGGSKSVADAIDVDHEDS
DL*
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mRNA from alignment at H-elongata_contig9471:2292..8209+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig9471.16885.1 ID=mRNA_H-elongata_contig9471.16885.1|Name=mRNA_H-elongata_contig9471.16885.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5918bp|location=Sequence derived from alignment at H-elongata_contig9471:2292..8209+ (Himanthalia elongata Himel1 dioecious)
ATGGTGACTAAGACCCTCTTGCCCAGAGACCTCAACGAATCTCGTCAACG
CAGAGCAGCTGGTGTGGAAGCCATAGAGGAGGGGGATGCCTTTTGGGTAA
GTGACTAAAAACGCTAAGGACTTCGCTCCTGCGCCATACGTCACCGCAAG
CCGGAAAGTTTATGGTTTAGTCCATATAGACCATTCGTTGCGGGAATTCA
ACGATCTCGAACGCACAGCTCTCGGGTGCATCTCGTTTTCCCCTATAGCA
ACCCCCCCTACTCAGGGTCTCTTTGCTGCTGTAGCCATCTTTTGTAGACT
TAAGATCGCTGACGGAGAGTACGCACGCTGCCGGTGAGCACATCGAGAGT
CACTCATGGCACGTCGCTCATAGCGCGCGCACGCATCACGGCAGAACGAG
GCGGATCCCAGCGCCAGTGCCGGCGGGGAAACAGGATGTCTTTTCCCTTC
TTCCTTCGGCCGTTGTCATCCAGCGTACCCTCGTTTGCACACGCTCAACT
CGAGACTGAACGGACACGTGCTTACGCTTAAGCTTTGACATCTCTGGTTT
GTCTTGAGGTGGATGTTTTGGCCGAGCCGAGATGGTTGCGGATTATTTAC
GCCAATGAGTGACGAGTAACATCTACCCGGAGATTTCCGGGAAAATTCCG
CAAAACGCTCAATAGACCGCCCACGGAACGTCTATCGCGTTGGGGTTTGT
TTGTTTTTTCACAACGATGGCGTTACTAAGTCGAGGGATCACGCCTCCCC
AAATCTGCAACGCTTTCGGTAGCAACGCCGACCAGTAGACGAGGGGGAAT
AGCGCAAGACGGCAGATTAAGGGGCGGCGCGTCTCATGACGAAACGGATC
GCTGCAGAGAAAGTCAGGACTGGACTACGGCATGCAGTAAAACGTAGTAT
GTCCGAACGTGACGGGAATTATCAAGGAAATGATAGCCCAAAGCAAGCGT
GCTCGTGCTGGTTTGCTCGCCATAGTTGATTAACCACGAGTGGCGCGCAC
TTGTACCCCCCGGGCGTTTTTTTGCTTGCCGATGTCACATTGCCTTTCTC
TAGCGTTACGAGGGAGGGTTGTCTTTTTGTTGTGATTGAATCGGTGGCTC
TTCGTTCAATCGTTCGTCGATAGGCCCGCCAGCCTCACGCGGTTAGTGGA
CAACTGTCTGTCTCCTCTAATTATTTTCTTTTCTTTGGGAATGTCGCTTT
TTCAGAGTATCATGTATCATTGCCGTTTCATTTTGTATATTTTCCTTCCG
GATGATATTTTTCGACCTTTCTAGAAACCTTGTGACCACGGGCTGTATTT
TGACATCAGCTTTTAATGTAAGAATTCAATCAAGCACCTTAAACCCCAAA
AGCTTGCAGTCTCGACAAACGCTCGCCCCCGCCCCGATCCCAGCTGCATA
TTTCTAGCGCCTCCCTAAACCTGCAAAACCTCTAGCACTCATATTCTCTC
TCGGGTGCGTAATTTTATGAGACAGGCGAGAGAGAGAGACAGGTTCCTAG
TTCGTTTAAGAGACCCCGGGGATACGAATCCCCTTTCTTTCGGAGACGTA
ACCTGATCACATATTGAAGCTCTCTAGTCTAACGGAGAGTGCTTGCCCTG
TGTAATACCACTGGTGCACTCCGTTCGATGTTCGATAAATTCGGAGAGAA
GGGCACTTCCAGAAGAAAAAATTACCCTCCCCCAAATAGCTATCGATGTA
GCTCGAAGAGTCACACACCTACTACTCTATAATAGGTACTGTCTGTATAA
ATGTTTAACGTCTCAAATACGGAAAGCATATATCATGTCAAAGTCCCTAA
TGAGTCGGGCCGCGCCTTTTGATTGGCTGGGTGGCATTTTGTGCTGCTGC
TGCTTCTTCGTTCTTATTTCGTCCTCTACCCTCTAGGTAAGTGTTGAGTG
GAGGGTTGCAGAGATAAGTAGGCGTGTCGCAGGAGATGGGTGTTGGCCAG
CGCAAATCGAAGGGGAGCAAAGGGGGACACAGGGCCAAGAACAAGGTGTA
CAAGAAGGCGCACGCAACCAAAAACAGGTAAGGTGCGTGGTGAGATGCGG
ATAGACTATGACATGATAGAATATAATAGGATCGCTTAAGTCGTGGAGGT
TGAGGTTTAGAGCAATGTGGCGTGGAAGGAAAGAGTAAGCCAACAATTCG
AATAATCACATATGACGGTTTTGTTCTTAAATTTAGTAATGTCCACATTC
GAACCTGACGATTGTTGGTCACCTGGACTGTACCCGTACGGTGCTAAGAA
GGTGTGGATGTTCGGAGGGTTTTAATGAGTTTCATATGTTTTTTAGTAAA
ACTGTTAGGAAAAGAAGAAAAACTCTCTCACTCTCTCTTTAATAGATTTG
AATATAAATAAAGTATAAATAGAGTCGGTTATCAAATACCGTGCAGCTCC
CCTTGCCATCGCGTGAAGCACTCGGGGGAGATGGGGGGGGGGGGCATCCT
TGAAATAAAGTTCGGACTGAAATCGTGGTTTCATGGTTTGGAGAGGAGAG
GAATTCACCCTTTATTCTCAAGTTTGCCTTAGGAGAGGAATCACACGACA
CGATGTTGTTGGTATGCATTGCGTATTTTCCCTTGCTTGGTTTACGTATC
ACGTATCGCAAGACCAAGAAAAAAATATCGGGAAGTTAGTTCATGCAGTG
TGTGTGTGTCCAGTCAGTTAGCTCAAACGCCTGTCGAAGAGTTTTGCCCC
TCTCCCCAGAGTGGTAAAATACATACTGTTATATAGGCTGTCTGCTGAGC
CACGAATTGTTGGAAAGCCCTAGAGCAAACATAGACTGTTGAGAGTGCTC
TGCGAGGATTTTTCATGAGCAGGTTATAATCCGAGTGTACCACACACGTA
CCGTGGCGTACATGGTACGCGAGCGGCGCTTGTCATGCGTCCGCGCCGAG
ATCAAAGTCCCCTTTCCGATCCTTGGTAATTTAGTATACGAAATAGTATA
CAGTATACTATATATAGTATGGAGTATACTAAATAGTACTAGTATACTAT
ATATAGTATGGAGTATACTATATACCAGGTATTGAAGTTACGCCCTCTGA
ATGTGCAGCATTTAGTTATTGTACCTGGTGTGCCCAATTTCCAATCCAAT
TCCGAGATTAACCCATGGCATGTCCTGTTTGGCGTAGCGAACGCCAGAAA
TGCTGGTATAATTCTTGTGTGAAACACGCCACGGTCTGACGGTCGAAAAC
CCGACATATCACTCCATAGCCCCATTTTTGTAAATACGTGGTCTATCTCC
GTTAGGATACATATGGCGTACGTTTAGAATACCACCCCCTCCCCCCCTCT
TCCCCCGTACGACAACCCGAAATATCCTGTATGTACCGCCATCGCCACTT
CTCATCTTCCGGCCAGACGAAAAGACGTCGACCAGATCCAGGACGAGCTG
AGGACGGAGGAGGAAAAAGGAGAGGAAACAAATTTCGAAGTTGACGATGA
TCTGCCCGGGCAGGGTCAGTTCTACTGCACGCCATGCGCACGTCATTTCA
CAGATGAGAAGACGAGGGTGGTGCACGTCAAGTCTAAGCTGCACAAGCGC
AGGTGTGGGTGTTGGTGTGTGGAGGCGTGCGGCAGGGGGGGATATCGTAA
CATGTTTAAAACGCCCCCCCAAACACACACAATTTTTCTCTCCCTACAGT
ATTTTTATTTGAAACGTTAATGTGGGTTAGGTTGTAAGAGCCCCAAGATT
TCCTGAGAGTTTAGGCCGAGGCCGCCCCTGTTAGAAAGGGCACGTAGGAA
CTTAAGCTTGACCCTTTTTTGCCAAAATGGTTTGCTTACACCCAAATATG
CGGTGTAAGATGACTGAGAAGGATATCGGTGCTAGGATGTGATGACCATA
GCAACGAAAGATACGCGGTAGAAACTAGCAGCGTAGTTTGAATTAAAATA
TGTCGCGACGAGGTTTCAGCCTACGTCGTATTTTGGGTTCCCATAATCTG
AGTGCGTTACACCCTGTAGCCTACCACACGGTAATTAGAATTATAATATG
GTAATGATGATATGATGATAATATGGTGATGATATGATGATAATATGGTA
ATAATAATATGATGATGTGGTAATAATGTTGTAATAATGTGATACTATGA
TGATAATATGGTGATGATATGGTGATAATATGGTAATAATATGATGATAA
TATGGTAATAATATGATGATAATATGGTAATAATATGATGATAATATGGT
AATAATATGATGATAATATGGTAATAATGGGATAGTAAGAAGGTACTAGT
AATAGTGCCGCCGTGCAGCGCACAGTAAACCCTGGGGTCGCCAAGCAACT
TTTTTTTTAGATGAGACTGTGGAGACGATGTTGATAGGTCAGTCGCTTCA
CCTCCACGGCTCTCTAGCTCTCATTTGATCCCACTCCCCTCAAGACTCTC
TCTCTCACCAGGACTTTTCCCACTGATGCATTCCTACACGCGCCCTCCCC
ATCCACCTCCACAATTATCGACTGTACTATTTCAGATTGAAGGACGTGGC
GCAAGAGCAGTACACGCAGGATGAGGCCGAGCGTGGGGCGGGGATGACAA
GAGAAAAATACCCGCCGGCTCATCCTGCTGTCTTCGAGACGGCGACAGTG
GCGGAGGGGGGGTCGAAGAGCGTCGCGGATGCCATCGACGTGGACCACGA
AGACTCGGATCTTTGAATGTTCCCGTTTGGTTTGGGTTATGGCTTCTTAT
CCACACCTACACATGTCGAGGTATAGATACTGTGTATATATATGTGTGTG
TTTGTGTGTGTGTGTGTACGACTTTCGGTCGGTGTCTGGGAAGGGAGGGT
ATACTAAGCGCTTCCCTGTCGTGTGTGTGTGTGTGTTCGACTTTCTGCCG
GTGTCTGGGAAGGGAGGGTATACTAAGCGCTTCCCTGTCGTAGCTGTACT
TTGCTGAGTATGGGGATACTCGTGAGCTTCTGAGATACTGTTATAAGGTT
TGCCACGCTGGTGAAAACGAGCGCCACATTTGCGCGTTTACGCTCCTCGT
GCACACTATGACAATGTCAAAAGGTTAAGATTTTCGACTCTCTCGCCACT
ACGTTGTTCTGGAGTAGCTCTAGAGCTACAGGGTTATCCCGACGTGGGAG
GGGGCCATGTATTGTTCTTTCTTTTAAAACATGAACTTATTCCAACCCTC
CAAACATCCACACCTTCTTAGCACCGTGAGAGGTACAGTCCAGGGGATCA
ACTATCGCCGGGTTCGAATATATACATTACTGCATTTTTGAGTACAAAAT
CGTCACTTGTGATTTATCGTGTTCCCCAATAGTAATGGCGTCATCGGGTC
GACGGTATAATATCGAGGATCCCATTATTATCATCATACCGTACACTTCT
ATCATTCATCATTCATCATGTGGGGACTATGATGCGAAACCGGAGCTATA
GCTACAGTATAGCTTAGAGAGTGGTGGGCTATAAAGAGGAAGAGAAGTTT
TAATGAAGTTTTTCGGTATTTTACTAGAATATCGAGTTCCAAGTTTTTAA
AACTAAGAATAGTAAAGGGCTGACTTTCATGGGAATGGGAATCTTAGTTG
ACAAGTAGGGATGTGTATGCATTATGTTACAATACATTTGAGACGTAGTA
TCGTTCGATCGGATTTACTCCGCGCACCATTTCTGAAAGAACAAGAAAAC
ATGAATAGTGATCTGCTACCCAGACTCCGTCCTTTCATGTAAAACCGATG
TGTGTCGTCGGTTGGCGGTGGGGTTTGGTGTATCGTCGATATGTACAGTG
TATCACGATATACACTCCAGACTTTCGGCGTCGGGGAGGCCCACTCACCA
GCTACTGGGGGGCGATTTTCTTGCGCGATTCGCGCGCTCGCTATATATAA
AATATTTTGTCAAGCCGTGACAATACGTAACCCTAGTATTTTGTAGAAAT
AATGTATCGCTGCCAACC
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Coding sequence (CDS) from alignment at H-elongata_contig9471:2292..8209+

>mRNA_H-elongata_contig9471.16885.1 ID=mRNA_H-elongata_contig9471.16885.1|Name=mRNA_H-elongata_contig9471.16885.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig9471:2292..8209+ (Himanthalia elongata Himel1 dioecious)
ATGGTGACTAAGACCCTCTTGCCCAGAGACCTCAACGAATCTCGTCAACG
CAGAGCAGCTGGTGTGGAAGCCATAGAGGAGGGGGATGCCTTTTGGATGG
TGACTAAGACCCTCTTGCCCAGAGACCTCAACGAATCTCGTCAACGCAGA
GCAGCTGGTGTGGAAGCCATAGAGGAGGGGGATGCCTTTTGGGTAAGTGT
TGAGTGGAGGGTTGCAGAGATAAGTAGGCGTGTCGCAGGAGATGGGTGTT
GGCCAGCGCAAATCGAAGGGGAGCAAAGGGGGACACAGGGCCAAGAACAA
GGTGTACAAGAAGGCGCACGCAACCAAAAACAGGTAAGGTAAGTGTTGAG
TGGAGGGTTGCAGAGATAAGTAGGCGTGTCGCAGGAGATGGGTGTTGGCC
AGCGCAAATCGAAGGGGAGCAAAGGGGGACACAGGGCCAAGAACAAGGTG
TACAAGAAGGCGCACGCAACCAAAAACAGGTAAGACGAAAAGACGTCGAC
CAGATCCAGGACGAGCTGAGGACGGAGGAGGAAAAAGGAGAGGAAACAAA
TTTCGAAGTTGACGATGATCTGCCCGGGCAGGGTCAGTTCTACTGCACGC
CATGCGCACGTCATTTCACAGATGAGAAGACGAGGGTGGTGCACGTCAAG
TCTAAGCTGCACAAGCGCAGACGAAAAGACGTCGACCAGATCCAGGACGA
GCTGAGGACGGAGGAGGAAAAAGGAGAGGAAACAAATTTCGAAGTTGACG
ATGATCTGCCCGGGCAGGGTCAGTTCTACTGCACGCCATGCGCACGTCAT
TTCACAGATGAGAAGACGAGGGTGGTGCACGTCAAGTCTAAGCTGCACAA
GCGCAGATTGAAGGACGTGGCGCAAGAGCAGTACACGCAGGATGAGGCCG
AGCGTGGGGCGGGGATGACAAGAGAAAAATACCCGCCGGCTCATCCTGCT
GTCTTCGAGACGGCGACAGTGGCGGAGGGGGGGTCGAAGAGCGTCGCGGA
TGCCATCGACGTGGACCACGAAGACTCGGATCTTTGAATTGAAGGACGTG
GCGCAAGAGCAGTACACGCAGGATGAGGCCGAGCGTGGGGCGGGGATGAC
AAGAGAAAAATACCCGCCGGCTCATCCTGCTGTCTTCGAGACGGCGACAG
TGGCGGAGGGGGGGTCGAAGAGCGTCGCGGATGCCATCGACGTGGACCAC
GAAGACTCGGATCTTTGA
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