prot_H-elongata_contig9471.16885.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9471.16885.1
Unique Nameprot_H-elongata_contig9471.16885.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A6H5JIE6_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE6_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 5.600e-41
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTRE 166
            RRKDVDQIQDEL  EEEKGEE  FEVDDDLPGQGQFYCTPCARHFTD++T+  H++SKLHKRR+KDVAQEQYTQ EAERGAGMT+E
Sbjct:   31 RRKDVDQIQDELMVEEEKGEEMVFEVDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKE 116          
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A024G9F2_9STRA (C2H2-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9F2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.020e-34
Identity = 61/93 (65.59%), Postives = 76/93 (81.72%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 173
            R +DVDQIQD+L+ E ++ +   FE+D+DLPG GQ+YCTPCARHF D  TR +HV++K+HKRRLKDV QEQYTQ EA+ GAG TRE+Y PAHP
Sbjct:   27 RSRDVDQIQDDLKLESQQNKPLKFEIDEDLPGLGQYYCTPCARHFIDATTRDLHVRTKVHKRRLKDVRQEQYTQREADLGAGKTREEYVPAHP 119          
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A662Y0F3_9STRA (C2H2-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0F3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.430e-33
Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 173
            R +DVDQIQD+LR E+ KG+   FE D+DLPG GQFYCTPC RHF D  TR VH+K+K+HKRRLKDVAQ+QYTQ EA  GAG T E Y PAHP
Sbjct:   28 RSRDVDQIQDDLRVEKLKGKPLAFEEDEDLPGLGQFYCTPCGRHFIDAITRDVHIKTKVHKRRLKDVAQKQYTQKEAMLGAGKTVETYTPAHP 120          
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: W2FRC2_PHYPR (C2H2-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2FRC2_PHYPR)

HSP 1 Score: 124 bits (310), Expect = 7.080e-33
Identity = 62/93 (66.67%), Postives = 74/93 (79.57%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 173
            R +D+DQIQD+LR E+  G+   FE D+DLPG GQFYCTPC RHF D KTR VH+K+K+HKRRLKDVAQ+QYTQ+EA +GAG   E Y PAHP
Sbjct:   29 RARDIDQIQDDLRVEKLTGKSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMQGAGKGVETYKPAHP 121          
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A8K1FHU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHU3_PYTOL)

HSP 1 Score: 123 bits (309), Expect = 9.160e-33
Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPP 170
            R +D+DQIQD+L+ E+  G+  +FEVD+DLPG GQ+YCTPC RHF D KTR VH+K KLHKRR+KDVAQEQYTQ EAE GAG + EKY P
Sbjct:   27 RGRDIDQIQDDLKLEKLSGKAMSFEVDEDLPGLGQYYCTPCGRHFIDAKTRDVHIKGKLHKRRMKDVAQEQYTQAEAEAGAGRSVEKYVP 116          
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A024UJ99_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJ99_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.190e-32
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 173
            R +D+DQIQD+L+ EEE G +  FE+D+DLPG GQ+YCTPC RHF     R VH+ SK+HKRR+KDVAQEQYTQ EAER AG + E Y PAHP
Sbjct:   27 RSRDIDQIQDDLKKEEETGVKMTFELDEDLPGLGQYYCTPCGRHFITANARDVHIASKVHKRRMKDVAQEQYTQKEAERAAGKSIETYTPAHP 119          
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A3R7IPL6_9STRA (C2H2-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IPL6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.750e-32
Identity = 62/93 (66.67%), Postives = 73/93 (78.49%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 173
            R +D+DQIQD+L  E   G++  FE D+DLPG GQFYCTPC RHF D  TR VHVK+K+HKRRLKDVAQ+QYTQ+EA  GAG + EKY PAHP
Sbjct:   29 RSRDIDQIQDDLCVETISGKKMAFEEDEDLPGLGQFYCTPCGRHFIDATTRDVHVKTKVHKRRLKDVAQKQYTQNEAMMGAGKSVEKYTPAHP 121          
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A0P1ACD5_PLAHL (Zinc finger protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACD5_PLAHL)

HSP 1 Score: 122 bits (305), Expect = 4.010e-32
Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAH 172
            R +D+DQIQD+LR E+  G+ TNFE D+DLPG GQFYCTPC RHF D KTR VH+K+K+HKRRLKDVAQ+QYTQ+EA + AG   E Y  AH
Sbjct:   29 RARDIDQIQDDLRVEKMTGKTTNFEEDEDLPGLGQFYCTPCGRHFIDSKTRDVHLKTKVHKRRLKDVAQKQYTQNEANQAAGKGIETYKLAH 120          
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: A0A329S597_9STRA (C2H2-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S597_9STRA)

HSP 1 Score: 121 bits (304), Expect = 5.670e-32
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 173
            R +D+DQIQD+L  E+  G+   FE D+DLPG GQFYCTPC RHF D KTR VH+K+K+HKRRLKDVAQ+QYTQ+EA  GAG   E Y PAHP
Sbjct:   29 RARDIDQIQDDLSVEKMTGKSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMEGAGKGIETYKPAHP 121          
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Match: K3X4G9_GLOUD (ELMO domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4G9_GLOUD)

HSP 1 Score: 129 bits (323), Expect = 8.730e-32
Identity = 63/93 (67.74%), Postives = 76/93 (81.72%), Query Frame = 0
Query:   81 RRKDVDQIQDELRTEEEKGEETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQEQYTQDEAERGAGMTREKYPPAHP 173
            R +D+DQIQD+++ E+ KG+   FE D+DLPG GQFYCTPCARHF D  TR VH+K+K+HKRR+KDVAQ+QYTQ EAE GAG T EKY PAHP
Sbjct:  342 RARDIDQIQDDMKLEQVKGKPMEFEKDEDLPGLGQFYCTPCARHFIDAVTRDVHLKTKVHKRRMKDVAQKQYTQKEAELGAGKTVEKYTPAHP 434          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9471.16885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIE6_9PHAE5.600e-4183.72C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A024G9F2_9STRA4.020e-3465.59C2H2-type domain-containing protein n=1 Tax=Albugo... [more]
A0A662Y0F3_9STRA3.430e-3368.82C2H2-type domain-containing protein n=1 Tax=Nothop... [more]
W2FRC2_PHYPR7.080e-3366.67C2H2-type domain-containing protein n=9 Tax=Phytop... [more]
A0A8K1FHU3_PYTOL9.160e-3367.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UJ99_9STRA1.190e-3264.52C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
A0A3R7IPL6_9STRA2.750e-3266.67C2H2-type domain-containing protein n=3 Tax=Phytop... [more]
A0A0P1ACD5_PLAHL4.010e-3266.30Zinc finger protein n=1 Tax=Plasmopara halstedii T... [more]
A0A329S597_9STRA5.670e-3265.59C2H2-type domain-containing protein n=1 Tax=Phytop... [more]
K3X4G9_GLOUD8.730e-3267.74ELMO domain-containing protein n=1 Tax=Globisporan... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..98
NoneNo IPR availableGENE3D3.30.160.60coord: 101..165
e-value: 2.8E-27
score: 96.4
NoneNo IPR availablePANTHERPTHR46095FAMILY NOT NAMEDcoord: 71..173
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 115..141
e-value: 2.7E-8
score: 33.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 118..140
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 103..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9471contigH-elongata_contig9471:2292..6957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9471.16885.1mRNA_H-elongata_contig9471.16885.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9471 2292..8209 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9471.16885.1 ID=prot_H-elongata_contig9471.16885.1|Name=mRNA_H-elongata_contig9471.16885.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
MVTKTLLPRDLNESRQRRAAGVEAIEEGDAFWVSVEWRVAEISRRVAGDG
CWPAQIEGEQRGTQGQEQGVQEGARNQKQVRRKDVDQIQDELRTEEEKGE
ETNFEVDDDLPGQGQFYCTPCARHFTDEKTRVVHVKSKLHKRRLKDVAQE
QYTQDEAERGAGMTREKYPPAHPAVFETATVAEGGSKSVADAIDVDHEDS
DL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022755Znf_C2H2_jaz
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf