prot_H-elongata_contig9464.16881.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI) HSP 1 Score: 209 bits (531), Expect = 1.600e-58 Identity = 129/203 (63.55%), Postives = 151/203 (74.38%), Query Frame = 0
Query: 5 QVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLDGDALRAARKAGGGAPLGXXXXXXXXXXXXADGN------RYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHTECRVDPRGGVPLLCAKPRGERLGHPAMFLSVGDVHIV-QLQQALEQAGVSVKFLARTLRCEG 200
++EVLCRVV+VDSEGLSDG S+KNT LAPKMLIV GGSRRAKA+LVS+VR ++ A A R+A XXXXXXXXXXXX R+VVV++A+EP+PV LDSGAFDVLLHDSLH+ LKWKQL NY VAH ECRVDPRG VPLLCAKPR ER+GHPAMFLSVG V++ Q+ Q +S F++ RC G
Sbjct: 798 ELEVLCRVVYVDSEGLSDGTSVKNTAVTLAPKMLIVTGGSRRAKAELVSYVRHAVEPAA--AGRRAXXXXXXXXXXXXXXXXXXXXXXXXXDVACRFVVVNKAMEPVPVALDSGAFDVLLHDSLHTHLKWKQLDNYGVAHVECRVDPRGDVPLLCAKPRAERVGHPAMFLSVGKVNVTPQILQVNWLETISQSFMSHH-RCLG 997
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA) HSP 1 Score: 124 bits (312), Expect = 5.360e-29 Identity = 81/247 (32.79%), Postives = 125/247 (50.61%), Query Frame = 0
Query: 5 QVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLDGDALRAARKAGGGAPLGXXXXXXXXXXXXADGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHTECRVDPR---GGV---------PLLCA---KPRGERLGHPAMFLSVGDVHIVQLQQALEQAGVSVKFLARTLRCEGGVTVRMEGTRL-ELEGPLCDAYFRVRQVVYQQYTIV 235
++ V RV ++D EGLSDGRS++N + + P+ L+++GGS +A + L R + A V R+ + + LD+ FDVL+HDSL+++L+W+ +K YE+A + V P+ GV P+L + GE G PA+F+S GDV + QL AL +AG++ A L G + V L +++GPL D YF VR ++Y+QYTIV
Sbjct: 641 ELVVRARVAYIDMEGLSDGRSVRNLLATVGPRQLVLVGGSVKAVSALSEDARDRHICSA--------------------------------VFTPRSGDTVRAALDTDVFDVLVHDSLYTRLRWQSVKGYELAQVDSAVAPQPRPSGVLGKRERPPPPILFPPQDREEGET-GRPAVFVSFGDVQLTQLSTALRKAGMTTALAAAKLTVSGTIVVTKGADGLLKIDGPLSDTYFAVRSIMYRQYTIV 854
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: UPI001F043033 (cleavage and polyadenylation specificity factor subunit 2-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F043033) HSP 1 Score: 94.0 bits (232), Expect = 2.270e-18 Identity = 66/248 (26.61%), Postives = 109/248 (43.95%), Query Frame = 0
Query: 6 VEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLDGDALRAARKAGGGAPLGXXXXXXXXXXXXADGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHTECR-----------------VDPRGGVPLLCAKPRGERLGHPAMFLSVGDVHIVQLQQALEQAGVSVKFLARTLRCEGGVTV--RMEGTRLELEGPLCDAYFRVRQVVYQQYTI 234
+ + C +++D EG SDG SIK V + P+ L+V+ GS A L + RK +D + + V E + +S + ++L DSL S L++ Q ++ E+A + + VD VP+L P E GH +F++ D + +Q L++ G+ +F L C GGV R E R+ L+G +CD Y+ +RQ++Y Q+ I
Sbjct: 536 INIKCSYLYIDFEGRSDGESIKRIVSIVKPRQLVVIHGSPDATKHLAEYCRKNIDMEV------------------------------KTVFTPNTGETVDATRESHIYQIILRDSLVSSLQFSQTRDAEIAWVDGQLVREQLKSLVHDQENMDVDTFDSVPVLEQLPLAEIPGHDQVFIN--DPRLSDFKQILQKNGIQAEFNGGVLVCCGGVIAITRNEAGRIGLDGAICDEYYVIRQMLYDQFAI 751
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: A0A1E1XLS1_9ACAR (Cleavage and polyadenylation specificity factor subunit 2 n=18 Tax=Ixodidae TaxID=6939 RepID=A0A1E1XLS1_9ACAR) HSP 1 Score: 91.3 bits (225), Expect = 1.910e-17 Identity = 70/255 (27.45%), Postives = 114/255 (44.71%), Query Frame = 0
Query: 1 EWAVQVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLDGDALRAARKAGGGAPLGXXXXXXXXXXXXADGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHTECRV-------------------DPRGGVPLLCAKPRGERLGHPAMFLSVGDVHIVQLQQALEQAGVSVKFLARTLRCEGGVTVRM-EGTRLELEGPLCDAYFRVRQVVYQQYTIV 235
E ++Q++V + F+D EG SDG S++ V+ + P+ +I++ GS A + + R GA G V R E + +S + V L DSL S L++ + KN E+A + + +PR + +L P + GH +F V ++ + +Q L + GV +F L C G V VR E R+ +EG LC+ YF+VR+++YQQY I+
Sbjct: 517 ETSLQLDVNASLQFIDFEGRSDGESVRKIVQMMKPQRVILVRGSPEATQAMAAFCRSS--------------GAVQGR-----------------VFTPRMNELVDATTESHIYQVKLRDSLVSSLQFSRAKNAELAWLDGEIATEEHLAPDGMQEDILDVDEPRDSMYILQPLPPSQVPGHATIF--VNELKLSDFKQVLLRNGVQAEFSGGVLYCNGIVAVRRNEAGRINIEGCLCEDYFKVREILYQQYAII 738
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: A0A0E0CG53_9ORYZ (Cleavage and polyadenylation specificity factor subunit 2 n=3 Tax=Oryza meridionalis TaxID=40149 RepID=A0A0E0CG53_9ORYZ) HSP 1 Score: 88.2 bits (217), Expect = 2.270e-16 Identity = 61/240 (25.42%), Postives = 107/240 (44.58%), Query Frame = 0
Query: 6 VEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLDGDALRAARKAGGGAPLGXXXXXXXXXXXXADGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHTECRVDPRGGVPLLCAKPRGERLGHPAMFLSVGDVHIVQLQQALEQAGVSVKFLARTLRCEGGVTVRMEGT----------RLELEGPLCDAYFRVRQVVYQQYTIV 235
V+V C + ++D EG SDGRS+K+ + ++AP L+++ GS A L H K D +V + E + V D ++ V L + L S + K+L +E+A + V + L P H ++ VGD+ + +Q L G+ V+F LRC +T+R G ++ +EGPLC+ Y+++R+++Y Q+ ++
Sbjct: 661 VQVKCSLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKSSD---------------------------------LHVYAPQIEETIDVTSDLCSYKVQLSEKLMSNVISKKLGEHEIAWVDAEVG-KADDKLTLLPPSSTPAAHKSVL--VGDLKLADFKQFLANKGLQVEFAGGALRCGEYITLRKIGDAGQKGSTGSQQIVIEGPLCEDYYKIRELLYSQFYLL 864
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: K3WHC0_GLOUD (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC0_GLOUD) HSP 1 Score: 87.0 bits (214), Expect = 5.450e-16 Identity = 58/234 (24.79%), Postives = 112/234 (47.86%), Query Frame = 0
Query: 6 VEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLDGDALRAARKAGGGAPLGXXXXXXXXXXXXADGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHT--ECRVDPRGGVPLLCAK-PRGERLGHPAMFLSVGDVHIVQLQQALEQAGVSVKFLARTLRCEGGVTV-RMEGTRLELEGPLCDAYFRVRQVVYQQYTIV 235
+ V R+ VD +G++DGR+I+N + N+ P+ LI++ G+ ++L V + P+ V +E + + D+ + + + +SL++ + ++++ +EVA+ + V VP+L G R H + LS G + + ++Q L +AG + KF L C GV + R + +EG L +Y+R+RQ++Y+Q+T+V
Sbjct: 541 IHVAARITHVDFDGVADGRAIRNCLSNVKPRKLILVHGTEDTTSELKRFVESSI---------------PM----------------CEAVFTPNVMECIDIESDTNVYKLAVKESLYTSVVFRKVGTHEVAYVTGQLAVTENSSVPVLQNMGEHGGRTLHEPILLSDGKMKLDVMKQVLGKAGFNAKFRGGMLVCNDGVVLKRALNNEIVMEGALSSSYYRIRQLLYEQFTLV 743
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: A0A8B8DS06_CRAVI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Crassostrea TaxID=6564 RepID=A0A8B8DS06_CRAVI) HSP 1 Score: 86.7 bits (213), Expect = 7.440e-16 Identity = 64/247 (25.91%), Postives = 112/247 (45.34%), Query Frame = 0
Query: 4 VQVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLD-----------GDALRAARKAGGGAPLGXXXXXXXXXXXXADGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHTECRVDPRGGVPLLCAKPRGERLGHPAMFLS---VGDVHIVQLQQALEQAGVSVKFLARTLRCEGGVTVRM-EGTRLELEGPLCDAYFRVRQVVYQQYTIV 235
V +++ + ++D EG SDG SIK + + P+ LI++ G+ A L H RK G+ + R++ A +D L+ D+GA ++++ ++ ++ + DP VP L A P + +GH A+F++ + D +V LQ+ G+ +F+A L C V VR E R++LEG +C+ +F++RQ++Y QY IV
Sbjct: 527 VTLDINANIQYIDFEGRSDGESIKKILLQIKPRQLILVRGTTEATEALAEHCRKNEGVVQGNIFLPHIGEVVDVTRESHIFQVRLRDYVVSALEFAKAKETELAWIDGILDLSQGKADTGA----MYEAEEGEVTEEKSRKRTDGMLNGEEDPMEVVPTLEAMPHNQFVGHKAVFINEPKLSDFKLVLLQE-----GIQAEFIAGVLICNNNVAVRRNEAGRIQLEGTICEDFFKIRQILYNQYAIV 764
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: R7V1Z3_CAPTE (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7V1Z3_CAPTE) HSP 1 Score: 85.5 bits (210), Expect = 1.830e-15 Identity = 66/243 (27.16%), Postives = 106/243 (43.62%), Query Frame = 0
Query: 6 VEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLDGDALRAARKAGGGAPLGXXXXXXXXXXXXADGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHTECRVD------------PRGGVPLLCAKPRGERLGHPAMFLSVGDVHIVQLQQALEQAGVSVKFLARTLRCEGGVTVRM-EGTRLELEGPLCDAYFRVRQVVYQQYTIV 235
+E+ ++++D EG SDG S++ + + P+ LI++ GSR + L + R D +G V R E + +S F V L DS+ S L + + ++ E+A + +D P + P + H A+F V + + +Q L GV +F A L C V VR E RL+LEG LCD Y+R+RQ++Y+Q+ IV
Sbjct: 520 LELRANILYIDFEGRSDGDSMRKIISQVRPRQLILVRGSRESTESLAAFCRDAPD---------------IGK-----------------VYTPRLNELVDATTESKIFQVRLKDSVVSALNFSKARDAEIAWIDAMLDLNQAEAMEDGENPEDEEAVPVVIPTSQIRPHGAVF--VNEPKLSDFKQTLVNLGVQAEFSAGVLICNSVVAVRKNEAGRLQLEGTLCDDYYRIRQLLYEQFAIV 728
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: A0A8K1FDQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDQ3_PYTOL) HSP 1 Score: 85.5 bits (210), Expect = 2.160e-15 Identity = 61/237 (25.74%), Postives = 112/237 (47.26%), Query Frame = 0
Query: 4 VQVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLDGDALRAARKAGGGAPLGXXXXXXXXXXXXADGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHT--ECRVDPRGGVPLLC--AKPRGERLGHPAMFLSVGDVHIVQLQQALEQAGVSVKFLARTLRCEGGVTV-RMEGTRLELEGPLCDAYFRVRQVVYQQYTIV 235
V + + RV VD GL+DGR+I+N + N+ P+ LI++ G+ +L V ++ A A V ALE + + D+ F +++ +SL++ ++++ +EVA+ E + +P+L + R H + LS G + + ++Q L +AG + KF L C GV + R + +EG L +Y+++RQ++Y Q+T+V
Sbjct: 1834 VTLMISARVTHVDFGGLADGRAIRNCLSNVKPRKLILVHGTEETTHELKRFVESTIN--ACEA-----------------------------VFTPNALECIDIESDTNVFKLVVKESLYTSSVFRKVGTHEVAYVTGEYNIGENNALPVLQHPSDSNDVRPTHEPILLSDGKLKLDVMKQVLSKAGFNAKFRGGMLVCNDGVVLKRAMNNEIIVEGALSSSYYKIRQLLYDQFTLV 2039
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Match: A0A2G8KW56_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KW56_STIJA) HSP 1 Score: 85.1 bits (209), Expect = 2.780e-15 Identity = 68/264 (25.76%), Postives = 105/264 (39.77%), Query Frame = 0
Query: 4 VQVEVLCRVVFVDSEGLSDGRSIKNTVRNLAPKMLIVLGGSRRAKADLVSHVRKQLDGDALRAARKAGGGAPLGXXXXXXXXXXXXADGNRYVVVDRALEPLPVGLDSGAFDVLLHDSLHSQLKWKQLKNYEVAHTECRVDPRGG-------------------------------VPLLCAKPRGERLGHPAMFLSVGDVHIVQLQQALEQAGVSVKFLARTLRCEGGVTVRM-EGTRLELEGPLCDAYFRVRQVVYQQYTIV 235
V +++ C + ++D EG SDG SIK V + P+ L+++ GS A L + R QL G V E + L+S + V L DSL S L +++ K+ E+ + ++D G + L A E GH +F V ++Q + + G+ +F L C V VR E RL LEG LCD YF+VR ++Y+QY ++
Sbjct: 1055 VAIDLKCSLTYIDFEGRSDGESIKKLVLQVKPRQLVIVRGSPAATQTLAEYYRLQLSGSK--------------------------------VFTPGVNEVIDATLESHIYQVKLKDSLVSSLDFQKAKDIELTWIDGQLDLETGGRSLMLEEEDETEMETTAPGLEMKKKKADDRIATLDAVSVSEETGHSQVF--VNAPRFQDVKQVMTRNGILAEFTGGVLVCNSTVAVRRHESGRLCLEGTLCDDYFKVRDLLYEQYAVI 1284 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9464.16881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig9464.16881.1 ID=prot_H-elongata_contig9464.16881.1|Name=mRNA_H-elongata_contig9464.16881.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bpback to top |