prot_H-elongata_contig94024.16835.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94024.16835.1
Unique Nameprot_H-elongata_contig94024.16835.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length196
Homology
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: D7FQT3_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT3_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 2.970e-126
Identity = 179/195 (91.79%), Postives = 188/195 (96.41%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 195
            MAV YDGGVIMGADSRTSTGTYVANRVSDKITSLHD+IYACRSGSAADTQA++DYVRYFLASHS ELGRLP VKTAA + RGLCY NKDRLLAGMIIAGWDPVDGG+VYEIPLGGT++KQKFAIGGSGSTYIYGHVD+AFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVS EYIPGD+LPFGP
Sbjct:   24 MAVQYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAITDYVRYFLASHSVELGRLPLVKTAAKMARGLCYNNKDRLLAGMIIAGWDPVDGGTVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSCEYIPGDQLPFGP 218          
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: A0A836CD01_9STRA (Proteasome endopeptidase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD01_9STRA)

HSP 1 Score: 340 bits (871), Expect = 5.470e-117
Identity = 165/195 (84.62%), Postives = 182/195 (93.33%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 195
            MA  YDGGVIMGADSRTSTGTYVANRVSDKIT+LHDYIYACRSGSAADTQA+SDYVRYFL+SHSAE+GRLP VKTAA+L R +CY NKD LLAGMIIAGWDPV GGSVYEIPLGGT++KQ+FAIGGSGSTYIYGHVD+A+KE MTKEEA+ FVRKAI+HAMARDGSSGGVIR+V IDK GV REYIPG++LP+GP
Sbjct:   22 MACMYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAISDYVRYFLSSHSAEVGRLPTVKTAANLARRICYNNKDNLLAGMIIAGWDPVHGGSVYEIPLGGTIMKQQFAIGGSGSTYIYGHVDAAYKEGMTKEEAKIFVRKAIAHAMARDGSSGGVIRIVTIDKDGVEREYIPGNELPYGP 216          
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: W7TIP5_9STRA (Proteasome subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIP5_9STRA)

HSP 1 Score: 316 bits (809), Expect = 1.750e-107
Identity = 152/195 (77.95%), Postives = 174/195 (89.23%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 195
            MAV +DGGV++GADSRTSTGTYVANRVSDK+T+LH +IY CRSGSAADTQA++DYVRYFLASH+ +LGR PAV TAA L+  L Y+NKD LLAG+II GWDP DGG VY + LGGT+ +QKF+IGGSGSTYIYGHVD AFKENMT+EE Q FV+KAISHAMARDGSSGGVIRMV IDK+GVSRE+IPGDKLP+GP
Sbjct:   26 MAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALADYVRYFLASHAIDLGRTPAVYTAAKLMSTLIYRNKDNLLAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKENMTREECQNFVKKAISHAMARDGSSGGVIRMVTIDKSGVSREFIPGDKLPYGP 220          
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: A0A7S3M7L5_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7L5_9STRA)

HSP 1 Score: 299 bits (765), Expect = 7.370e-101
Identity = 140/195 (71.79%), Postives = 171/195 (87.69%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 195
            MAVT+DGGV++GADSRTSTG+YVANRVSDKI  +HDY++ACRSGSAADTQAVSDYV+Y++ SHS ELGRLP VKT A+L+R +CY NKDR+ AGMI  GWDP +GG VYEIPLGGT+++QKFA+GGSGS+YIYG VDS ++E M+KEE + FV+ AISHAMARDGSSGGVIR+VVID++G+ +E + GD LPF P
Sbjct:   21 MAVTFDGGVVLGADSRTSTGSYVANRVSDKIVPIHDYVWACRSGSAADTQAVSDYVKYYINSHSTELGRLPRVKTCANLMRKICYNNKDRMQAGMICGGWDPYEGGQVYEIPLGGTMMQQKFALGGSGSSYIYGLVDSTYREGMSKEECKVFVKTAISHAMARDGSSGGVIRLVVIDQSGIEKEVVLGDNLPFKP 215          
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: A0A7S2WTH2_9STRA (Proteasome endopeptidase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTH2_9STRA)

HSP 1 Score: 297 bits (760), Expect = 4.880e-100
Identity = 136/195 (69.74%), Postives = 170/195 (87.18%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 195
            MA  +DGGV++GADSR STGTY+ANRVSDK+ +LHD I+ CRSGSAADTQA+SDYVRY+L+SH+ E+ R P VKTAA+L R + Y+NKD LLAG+I+ GWDPV+GGSVY IPLGGT++K  FAIGGSGSTYIYGHVD+ +KE M++EEAQ FV+K+I+HAMARDGSSGG+IR+V +D  GV R+Y+PGD+LP+GP
Sbjct:   25 MACCFDGGVVLGADSRVSTGTYIANRVSDKVAALHDTIFMCRSGSAADTQAISDYVRYWLSSHATEVNRPPTVKTAATLARRIAYENKDALLAGVIVGGWDPVEGGSVYVIPLGGTLMKMPFAIGGSGSTYIYGHVDAQYKEGMSREEAQAFVKKSIAHAMARDGSSGGIIRLVTVDANGVERDYVPGDQLPYGP 219          
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: A0A812V0V3_SYMMI (Proteasome subunit beta n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V0V3_SYMMI)

HSP 1 Score: 288 bits (737), Expect = 6.790e-97
Identity = 133/193 (68.91%), Postives = 168/193 (87.05%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 193
            MAV +DGGV++GADSRTSTG+YVANRVSDKI  +HDYI+ACRSGSAADTQAV DYV+Y+L +HS EL RLP V+TAA+L+R +CY NKD ++AG+I  GWDP +GG VYE+PLGGT+++QKFA+GGSGS+YIYG VDS F+E MTKEE + FV+K+I+HAM+RDGSSGGV+R+ VID+ GV RE + G++LPF
Sbjct:    1 MAVEFDGGVVLGADSRTSTGSYVANRVSDKIVPIHDYIWACRSGSAADTQAVVDYVKYYLDAHSGELNRLPRVQTAANLMRLICYNNKDNMMAGLICGGWDPYEGGQVYEVPLGGTLVRQKFAVGGSGSSYIYGLVDSTFREGMTKEECKDFVKKSIAHAMSRDGSSGGVVRLTVIDRGGVERECVLGNELPF 193          
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: F0W411_9STRA (Proteasome subunit beta n=2 Tax=Albugo TaxID=65356 RepID=F0W411_9STRA)

HSP 1 Score: 288 bits (738), Expect = 9.830e-97
Identity = 137/193 (70.98%), Postives = 165/193 (85.49%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 193
            +AV +DGGV++GADSRTSTG YVANRVSDK+T LHD IY CRSGSAADTQA+SDYVRYFL+SHS ++G+LP V TAA+L R LCY NKDRLLAG+I+AGWDPV GG VY IP+GG ++KQ FAIGGSGSTYIYG VD+A++ +MT+EE Q FV+K ++HAMARDGSSGGVIR V I K  V+RE+  G++LPF
Sbjct:   22 IAVKFDGGVVLGADSRTSTGAYVANRVSDKLTGLHDRIYCCRSGSAADTQALSDYVRYFLSSHSLDVGKLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPVHGGQVYSIPIGGAMVKQNFAIGGSGSTYIYGLVDAAYRPDMTQEECQAFVKKMLAHAMARDGSSGGVIRTVTITKDSVTREFTSGEQLPF 214          
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: A0A2D4BVR2_PYTIN (Proteasome subunit beta n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BVR2_PYTIN)

HSP 1 Score: 286 bits (733), Expect = 5.870e-96
Identity = 138/193 (71.50%), Postives = 165/193 (85.49%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 193
            +AV +DGGV++GADSRTSTGTY+ANRVSDK+T LHD IY CRSGSAADTQA+SDYVR+FLASH+ +LGR P V TAA+L R LCY NKDRLLAG+I+AG DPV GG V+ IP+GG +++Q FAIGGSGSTYIYG+VDSA++ NMTKEE Q FV+KA++HAMARDGSSGGVIRMV I    V RE++ G +LPF
Sbjct:   23 IAVRFDGGVVLGADSRTSTGTYIANRVSDKLTPLHDRIYCCRSGSAADTQALSDYVRHFLASHAMDLGRRPKVHTAANLFRSLCYNNKDRLLAGIIVAGVDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGYVDSAYRPNMTKEECQSFVKKALAHAMARDGSSGGVIRMVTITADDVVREFVSGTELPF 215          
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: K3WDU5_GLOUD (Proteasome subunit beta n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WDU5_GLOUD)

HSP 1 Score: 286 bits (732), Expect = 8.620e-96
Identity = 135/193 (69.95%), Postives = 164/193 (84.97%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 193
            +AV +DGGV++GADSRTSTGTY+ANRVSDK+T LHD I+ CRSGSAADTQA+SDYV+YFL+SH+ +LGRLP V TAA+L R LCY NKDRLLAG+I+AGWDP+ GG V+ +P+GG +++Q FAIGGSGSTYIYG VD+ +K  MTKEE Q+FV+KA++HAMARDGSSGGVIR V I K  V RE+  GD LPF
Sbjct:   24 IAVRFDGGVVLGADSRTSTGTYIANRVSDKLTPLHDRIFCCRSGSAADTQALSDYVKYFLSSHAVDLGRLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPIKGGQVFSVPIGGAMVEQDFAIGGSGSTYIYGLVDAEYKPGMTKEECQKFVKKALAHAMARDGSSGGVIRTVTITKDEVVREFTSGDALPF 216          
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Match: A0A7S2V2Y9_9STRA (Proteasome endopeptidase complex n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Y9_9STRA)

HSP 1 Score: 286 bits (733), Expect = 1.570e-95
Identity = 136/195 (69.74%), Postives = 163/195 (83.59%), Query Frame = 0
Query:    1 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGWDPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 195
            MA  Y+GGV++GADSRTSTGTYVANR S+K+T L D I+ CRSGSAADT+AV+DYV+YFL SHS E+G  P V++AA LVR LCY+NKD L+AGMII GWDPVDGG VY +PLGGT+++Q  AIGGSGSTYIYGHVD+A++  M+KEE   FV KAISHAMARDGSSGGVIR+V ID  G+ ++Y  GDKLP+GP
Sbjct:   52 MACEYEGGVVVGADSRTSTGTYVANRASNKVTYLADNIFGCRSGSAADTEAVTDYVKYFLESHSTEIGGPPRVRSAAHLVRKLCYENKDALMAGMIIGGWDPVDGGQVYSVPLGGTLMRQPVAIGGSGSTYIYGHVDAAYRPGMSKEECHAFVAKAISHAMARDGSSGGVIRLVSIDANGIEKQYFAGDKLPYGP 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94024.16835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT3_ECTSI2.970e-12691.79Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A836CD01_9STRA5.470e-11784.62Proteasome endopeptidase complex n=1 Tax=Tribonema... [more]
W7TIP5_9STRA1.750e-10777.95Proteasome subunit beta n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S3M7L5_9STRA7.370e-10171.79Proteasome subunit beta n=1 Tax=Spumella elongata ... [more]
A0A7S2WTH2_9STRA4.880e-10069.74Proteasome endopeptidase complex n=1 Tax=Rhizochro... [more]
A0A812V0V3_SYMMI6.790e-9768.91Proteasome subunit beta n=1 Tax=Symbiodinium micro... [more]
F0W411_9STRA9.830e-9770.98Proteasome subunit beta n=2 Tax=Albugo TaxID=65356... [more]
A0A2D4BVR2_PYTIN5.870e-9671.50Proteasome subunit beta n=2 Tax=Pythium TaxID=4797... [more]
K3WDU5_GLOUD8.620e-9669.95Proteasome subunit beta n=2 Tax=Pythiaceae TaxID=4... [more]
A0A7S2V2Y9_9STRA1.570e-9569.74Proteasome endopeptidase complex n=1 Tax=Fibrocaps... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000243Peptidase T1A, proteasome beta-subunitPRINTSPR00141PROTEASOMEcoord: 137..148
score: 48.67
coord: 162..173
score: 62.69
coord: 126..137
score: 71.02
coord: 5..20
score: 57.1
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 1..176
e-value: 6.2E-42
score: 143.2
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 1..194
e-value: 3.9E-78
score: 263.6
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 1..183
IPR037559Proteasome subunit beta Pre3PANTHERPTHR11599:SF4PROTEASOME SUBUNIT BETA TYPEcoord: 1..190
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 1..190
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 1..48
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 1..176
score: 46.295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94024contigH-elongata_contig94024:990..2275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94024.16835.1mRNA_H-elongata_contig94024.16835.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94024 431..2529 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94024.16835.1 ID=prot_H-elongata_contig94024.16835.1|Name=mRNA_H-elongata_contig94024.16835.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp
MAVTYDGGVIMGADSRTSTGTYVANRVSDKITSLHDYIYACRSGSAADTQ
AVSDYVRYFLASHSAELGRLPAVKTAASLVRGLCYKNKDRLLAGMIIAGW
DPVDGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSAFKENMTKEEAQ
QFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000243Pept_T1A_subB
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR037559Proteasome_beta_Pre3
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type