mRNA_H-elongata_contig12200.1681.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: D8LF19_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF19_ECTSI) HSP 1 Score: 561 bits (1447), Expect = 1.020e-194 Identity = 276/340 (81.18%), Postives = 308/340 (90.59%), Query Frame = 1
Query: 361 PAPAPAK-AVGLTPEEFCSSHKIMIKSDNDNFAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIMNRPGGMRVSRGAGPFVLVLAPTRELACQINEEATKFGRGSGIRSTTVYGGAPKYPQIKAIESGVQVVIATPGRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPPKRQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTELHGSPPKSDHFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERTQVSFVY 1377
PA PA A LT EFCS+HKI IKSD+D+F P PM +F++TPFGGPIR ALKAAGYP PTPTQAQSWPIA+SGRDIISVARTGSGKTLGFLLPAFHA++NRPGG + G GP+++VLAPTRELACQINEEATKFG+ +GIRSTTVYGG+PKYPQIKAI+SGVQVVIATPGRLNDI++MGKI+++NVMTLALDEADRMLDMGFEPQIRTII+A+P KRQTLFFTATWPKEVQRLARDFV +PVHITVGDAGKLNANKSI Q+I ++DERDK DKLWELLT+LH +PPK+DH KTIIFSSKKRNCDKLAQ AWDRGFAVDSLHGDREQWERT+V Y
Sbjct: 108 PATEPAGGAPALTAAEFCSTHKIAIKSDDDSFDCPVPMSSFESTPFGGPIRGALKAAGYPAPTPTQAQSWPIALSGRDIISVARTGSGKTLGFLLPAFHALLNRPGGCKPRMG-GPYIVVLAPTRELACQINEEATKFGKAAGIRSTTVYGGSPKYPQIKAIQSGVQVVIATPGRLNDIMEMGKINMTNVMTLALDEADRMLDMGFEPQIRTIIDAMPAKRQTLFFTATWPKEVQRLARDFVTNPVHITVGDAGKLNANKSITQHIHIVDERDKGDKLWELLTKLHENPPKADHGKTIIFSSKKRNCDKLAQAAWDRGFAVDSLHGDREQWERTKVMDQY 446
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: A0A7S3H7A5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7A5_9STRA) HSP 1 Score: 379 bits (974), Expect = 1.880e-123 Identity = 193/326 (59.20%), Postives = 247/326 (75.77%), Query Frame = 1
Query: 400 EEFCSSHKIMIK----SDNDNFAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIMNRPGGMRVSRGAGPFVLVLAPTRELACQINEEATKFGRGSGIRSTTVYGGAPKYPQIKAIESGVQVVIATPGRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPPKRQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTELHGSPPKSDHFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERTQV 1365
EEF S+H+I I S + ++ P PM +F +TPF PIR+AL AAG+P PTPTQAQSWPIA+SGRDII+VA+TGSGKT GFLLPAFH +++ R RGA P ++VLAPTRELACQI EEA KFGR S IRS YGGAPK QI+ I++G++V+I TPGRLND+++MG ++L V+ L LDEADRMLDMGFEPQIRTII IP +RQ+LFFTATWP+EVQ LAR+F++ PV + GD LNANK+I Q I V + +KSDKL E+L E++ + K+IIF S+K +CD+LA WD G++VD+LHGD++Q+ RT+V
Sbjct: 91 EEFRSTHQITINGLHSSGSGSYVPPAPMTSFASTPFAPPIRKALDAAGFPNPTPTQAQSWPIALSGRDIITVAKTGSGKTCGFLLPAFHLLLSAFEKGR-KRGA-PAIVVLAPTRELACQIEEEAIKFGRTSNIRSVCAYGGAPKSLQIRKIQAGIEVLICTPGRLNDLLEMGVVNLGQVLFLVLDEADRMLDMGFEPQIRTIISKIPLERQSLFFTATWPREVQTLAREFLKTPVELKFGDVNNLNANKAILQKIIVCSDNEKSDKLKEVLKEINPDNKPEEVPKSIIFVSRKSDCDRLANTLWDAGYSVDALHGDKQQFLRTRV 414
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: A0A835YJ27_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ27_9STRA) HSP 1 Score: 355 bits (911), Expect = 6.200e-115 Identity = 183/309 (59.22%), Postives = 228/309 (73.79%), Query Frame = 1
Query: 451 FAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIMNRPGGMRVSRGAGPFVLVLAPTRELACQINEEATKFGRGSGIRSTTVYGGAPKYPQIKAIESGVQVVIATPGRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPPK--RQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTELHGSPPKS--DHFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERTQV 1365
+ P P+++F A PF I+ ALKAAG+ PTPTQAQSWP+ + GRD+ISVA+TGSGKTLGFLLPAFH + + + +G GP +LVLAPTRELACQI +E+ KFGR + I+S +YGGAPK+PQI+A+ + QVVIATPGRLNDI M KISL+NV L LDEADRMLDMGFEPQIR I+ + PK RQTLFFTATWPK VQ+LAR+F+ +PV + +G L ANKSI Q I VI E DK D L ELL + +H K IIF+++KR CD+L++ W+ GF+VD+LHGD+EQ ERT V
Sbjct: 47 YEAPNPVISFGAAPFHPSIKTALKAAGFAAPTPTQAQSWPVVLQGRDLISVAKTGSGKTLGFLLPAFHRMQEKK--TQYFKGKGPSILVLAPTRELACQIYDESRKFGRLADIKSCCLYGGAPKWPQIQALATDPQVVIATPGRLNDIANMRKISLANVEFLVLDEADRMLDMGFEPQIREILGNMGPKTSRQTLFFTATWPKTVQKLAREFLSNPVQLNLGSGDSLQANKSISQTIAVIGEGDKEDALKELLASRSTVDKEGVMEHGKIIIFTARKRTCDELSRRLWNGGFSVDALHGDKEQRERTSV 353
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: A0A0L0FLW3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FLW3_9EUKA) HSP 1 Score: 357 bits (915), Expect = 1.720e-114 Identity = 182/331 (54.98%), Postives = 231/331 (69.79%), Query Frame = 1
Query: 406 FCSSHKIMIKSDNDNFAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIM----NRPGGMRVS--RGAGPFVLVLAPTRELACQINEEATKFGRGSGIRSTTVYGGAPKYPQIKAIESGVQVVIATPGRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPPKRQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTELHGSPPKS-DHFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERTQVSFVY 1377
F H I I + +P PM+T+D+TPF G ++ L A+G+PGPT +QA SWPI + G+DII+VA+TGSGKTLGFL+P FH I+ N+ G R RG P VLVLAPTRELACQI EA KFG +GIRS +YGGAPKYPQI+AIE G QV+IATPGRL DI++M KIS+ + LDEADRMLDMGF PQI I+E +P ++QTLFFTATWPK VQ+LA ++D V + G KL ANK+++QNI ++D K D+L +LLTEL + + H K IIF+++K C+ L W+ GFAVD LHGDREQ+ERT + Y
Sbjct: 104 FMKEHDIKITPGTSTYDIPHPMLTWDSTPFSGKVKANLVASGFPGPTASQAMSWPIILGGQDIIAVAKTGSGKTLGFLVPCFHHIVTSKWNQGGDFRGQPRRGEPPKVLVLAPTRELACQIEAEAKKFGMTAGIRSVCLYGGAPKYPQIRAIEQGAQVIIATPGRLCDIMEMKKISVLGIECAILDEADRMLDMGFGPQITEIMEKLPKQKQTLFFTATWPKAVQKLANTLLKDAVQVNFGAVHKLQANKNVEQNIRIVDNHSKFDELKKLLTELSETEDAAKSHPKMIIFTARKHTCNDLGNQLWESGFAVDCLHGDREQFERTNIMKQY 434
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: B8BR52_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR52_THAPS) HSP 1 Score: 343 bits (881), Expect = 1.670e-110 Identity = 183/331 (55.29%), Postives = 226/331 (68.28%), Query Frame = 1
Query: 391 LTPEEFCSSHKIMIK----SDNDNFAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIMNRPGGMRVSRGAGPFVLVLAPTRELACQINEEATKFGRGSGIRSTTVYGGAPKYPQIKAIESGVQVVIATPGRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPPK--RQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTELHGSPPKSDHFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERTQV 1365
++P E+ + I ++ S D+F P P + F PF I++ LK+AG+ PT Q+Q+WPIAI+G D+I VA+TGSGKT GFLLP+FH G GP +LVLAPTRELACQI +E KFGR GIRS YGG+PKY QI A+E GV+ VIATPGRLND+I+M K +LSNV + LDEADRMLDMGFEPQIR+I+ ++P RQTL F+ATWPKE+QRLA DF+ DP+ I VG+ LNANK I Q I + E DK D+L E+LT+L H K I+F KK +LA WD GFAVDSLHGDREQWERT+V
Sbjct: 17 ISPTEWRKENNITVRGYGSSAGDSF--PDPFIEFGDAPFSDSIQKTLKSAGFERPTFIQSQAWPIAINGSDMICVAKTGSGKTCGFLLPSFHQYFQSKATANKG-GKGPIMLVLAPTRELACQILDETQKFGRPIGIRSVCCYGGSPKYAQIAALERGVECVIATPGRLNDLIEMKKANLSNVKFVVLDEADRMLDMGFEPQIRSIMGSVPDSTNRQTLLFSATWPKEIQRLAFDFLSDPIQINVGEINVLNANKDITQKIMMCSEDDKIDRLKEILTDLK-------HSKVIVFVGKKYVAHELANQLWDEGFAVDSLHGDREQWERTKV 337
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: A0A7S2PL85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PL85_9STRA) HSP 1 Score: 340 bits (872), Expect = 3.320e-109 Identity = 181/351 (51.57%), Postives = 233/351 (66.38%), Query Frame = 1
Query: 400 EEFCSSHKIMIKSD----NDNFAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIMNRPGGMRVSRG-AGPFVLVLAPTRELACQINEEATKFGRGSGIRSTTVYGGAPKYPQIKAIESGVQVVIATPGRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPP--KRQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTELHGSPPKSD----------------------HFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERTQV 1365
EE+ ++H+I ++ N+ FA P + FD PF I++ LKAAG+ PT Q+Q+WPIA+ G D+IS+A+TGSGKT GFLLPAFH + G R GP ++VLAPTRELA QI +E KFGR GIRS YGG+PKYPQI+A++ GV+ +IATPGR+ND+I+M K LS V + LDEADRMLDMGFEPQIR+I+ +P KRQTL F+ATWPKE+Q+LA DF+ +PV I VG+ LNANK I QNI ++ + +K DKL E+LT+L S +S+ H K I+F +KK +LA WD GFA DSLHGDR QWERT+V
Sbjct: 9 EEWRTAHQITVRGHGKRINEKFA--DPFIEFDDAPFNPVIQKTLKAAGFERPTLIQSQAWPIALQGTDLISIAKTGSGKTCGFLLPAFHNFLQTKGAPGNGRNFQGPMMIVLAPTRELAIQILDETQKFGRPIGIRSVCCYGGSPKYPQIQALQRGVECIIATPGRINDLIEMRKADLSGVKFVVLDEADRMLDMGFEPQIRSILSNVPEATKRQTLLFSATWPKEIQKLAFDFLNEPVQINVGEVNALNANKDITQNIIMLSDDEKLDKLKEILTQLVDSADESEEKSAPAPTGRFAPKPVDLGGKKHAKIIVFVAKKYVAHELANQLWDDGFACDSLHGDRAQWERTKV 357
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: A0A7S0BVZ7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVZ7_9STRA) HSP 1 Score: 344 bits (882), Expect = 7.450e-109 Identity = 178/354 (50.28%), Postives = 226/354 (63.84%), Query Frame = 1
Query: 391 LTPEEFCSSHKI-MIKSDNDNFAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIMNRPGGMRVSRGAG--------------------------PFVLVLAPTRELACQINEEATKFGRGSGIRSTTVYGGAPKYPQIKAIESGVQVVIATPGRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPPKRQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTELHGSPP--KSDHFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERTQV 1365
+ P+++ I ++KS + +F P P F PF I++AL +AG+ PT QAQ+WPIA++G D+I VA+TGSGKT GFLLP+ H + + + G P +LVLAPTRELA QI EE KFGR G+RS +YGGAPKYPQI+A+ GV VIATPGR+ND+I+MG+ LS + + LDEADRMLDMGFEPQIR+++E +P KRQTL F+ATWPKE+QRLA DF+ P+ + VGD LNANK IKQNI + E +K K LL E+ K H K IIF S+K +CD LA W+ GFAVDSLHGDR QWERT+V
Sbjct: 120 INPDDWRKEQNITVVKSSDTSFQTPTPFYNFSDAPFNATIQRALTSAGFEKPTAIQAQAWPIALNGDDMICVAKTGSGKTCGFLLPSMHQYLKSGPNLTPASTGGRGSXXXXXXXXXXXXXXXXXXXXGTKPVLLVLAPTRELAVQIEEECKKFGRSVGLRSICLYGGAPKYPQIQALNRGVDFVIATPGRINDLIEMGRCDLSAIQFVVLDEADRMLDMGFEPQIRSVLEHVPEKRQTLLFSATWPKEIQRLAYDFLNTPIQVNVGDVNSLNANKDIKQNIHICMESEKFTKCTGLLKEMTSEENGGKEKHAKVIIFVSRKMSCDSLANELWEDGFAVDSLHGDRAQWERTKV 473
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: W4H177_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H177_9STRA) HSP 1 Score: 336 bits (861), Expect = 2.210e-107 Identity = 174/330 (52.73%), Postives = 226/330 (68.48%), Query Frame = 1
Query: 388 GLTPEEFCSSHKIMIKSDNDNFAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIMNRPGGMRVSRGAGPFVLVLAPTRELACQINEEATKFGRGS-GIRSTTVYGGAPKYPQIKAIESGVQVVIATPGRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPPKRQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTELHGSPPKSD-----HFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERT 1359
G + ++ +SH I + N +A P P++ F TPF I + L+AAGY PTPTQ+QSWPIA++ +D+ISVA+TGSGKT+GFLLP+FH IM + R P +LVLAPTRELA QI EA KF R +R+ V+GGAPKY Q+ ++ +GV ++ATPGRLND IQM KI LS V L LDEADRMLDMGFEPQIRTII+ IP RQTL F+ATWPK +Q++AR+F+R+PV + +GD L ANK I+Q I + E +K DKL L+ ++ ++ H KTI+F KR C++L Q WD G+AV LHGD+EQ ERT
Sbjct: 33 GTSGAQWRASHTIEVIGSNGGYACPDPILAFKDTPFSPAIIKCLEAAGYTAPTPTQSQSWPIALAKQDMISVAKTGSGKTVGFLLPSFHHIMQQKTSCR-----DPRILVLAPTRELATQIEVEAKKFSRVQPALRTACVFGGAPKYNQLNSLAAGVDCLVATPGRLNDFIQMRKIDLSKVSILVLDEADRMLDMGFEPQIRTIIDQIPTNRQTLLFSATWPKSIQKMAREFLRNPVQVNMGDINVLQANKDIQQIIDICREDEKRDKLVTLMNQIVTMTDSANTDVTLHVKTIVFFRTKRTCERLGQEFWDAGYAVGCLHGDKEQHERT 357
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: A0A1Z5K9Y7_FISSO (ATP-dependent RNA helicase DDX5/DBP2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9Y7_FISSO) HSP 1 Score: 337 bits (864), Expect = 1.240e-106 Identity = 180/348 (51.72%), Postives = 228/348 (65.52%), Query Frame = 1
Query: 394 TPEEFCSSHKIMIKSDNDNFAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIMNRPGGMRVSRG-AGPFVLVLAPTRELACQINEEATKFGRGSGIRSTTVYGGAPKYPQIKAIESGVQVVIATP-----------------GRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPPKRQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTEL------HGSPPKSDHFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERTQV 1365
+PE++ + H I + DN VP P F TPF I Q + AG+ P+ QAQSWPIA+ GRD+I++ARTGSGKTLGFLLP FH + + + +G P +LVLAPTREL+ QI EEA KFGR GIRS YGG+ K+PQI A+E GV+ VIATP GRLND+++M K+ L V L LDEADRMLDMGFEPQIRTI++ +P +RQTL F+ATWPKE+Q LA DF+++P+ I VG+ L ANK I+Q + V + +K+DKL E+L EL G P H K I+F +KK +C LA WD G+AVDSLHGDR QWERT+V
Sbjct: 70 SPEDWRTEHSITVVGRFDNGEVPAPFREFSKTPFSERILQGFQKAGFSAPSAIQAQSWPIALQGRDMINIARTGSGKTLGFLLPCFHLHLQQH--KKPLQGFTPPMLLVLAPTRELSVQIMEEAQKFGRLLGIRSVCCYGGSSKWPQISALERGVECVIATPVVLTLPSFYSTPFHDYTGRLNDLLEMKKVHLEKVSFLVLDEADRMLDMGFEPQIRTIVKHLPKERQTLLFSATWPKEIQALANDFLKNPIQINVGEVNALVANKDIQQKVIVCMDHEKADKLAEILQELLKEGAETGPPGTKVHPKAIVFVAKKISCHDLANRLWDEGYAVDSLHGDRPQWERTRV 415
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Match: A0A7S2YLW6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YLW6_9STRA) HSP 1 Score: 337 bits (863), Expect = 1.750e-106 Identity = 175/342 (51.17%), Postives = 223/342 (65.20%), Query Frame = 1
Query: 391 LTPEEFCSSHKIMIK---SDNDNFAVPPPMVTFDATPFGGPIRQALKAAGYPGPTPTQAQSWPIAISGRDIISVARTGSGKTLGFLLPAFHAIMNRPGGMRVSRGAGPFVLVLAPTRELACQINEEATKFGRGSGIRSTTVYGGAPKYPQIKAIESGVQVVIATPGRLNDIIQMGKISLSNVMTLALDEADRMLDMGFEPQIRTIIEAIPPKRQTLFFTATWPKEVQRLARDFVRDPVHITVGDAGKLNANKSIKQNICVIDERDKSDKLWELLTELHGSPPKSD----------HFKTIIFSSKKRNCDKLAQGAWDRGFAVDSLHGDREQWERTQVSFVY 1377
LTPE++ + H I I+ ++ P P F PF +++A AG+ PT Q+Q+WPIA+ +D+I +A+TGSGKT GFLLPAFH + + R P +LVLAPTREL+ QI EEA KFGR GIR+ YGGA KYPQI A+E GV+ VIATPGRLND+++M K LS + L LDEADRMLDMGFEPQIR+I+ +P RQTL F+ATWP+E+Q LA DF+RDP+ I VG+ L ANK IKQ I + + +K DKL ++L EL +D H K I+F +KK +C LA WD GFAVDSLHGDR QWERT+V +
Sbjct: 91 LTPEQWRAEHHITIQGHGAERSTKEYPAPFKLFKEAPFNSRVQEAFAKAGFEKPTAIQSQAWPIALMNKDMICIAKTGSGKTCGFLLPAFHQHLEK--SERKQGYTPPMMLVLAPTRELSVQIMEEAQKFGRQLGIRTVCCYGGASKYPQISALERGVECVIATPGRLNDLLEMRKADLSKIQFLVLDEADRMLDMGFEPQIRSIVAKVPEVRQTLLFSATWPREIQALAHDFLRDPIQINVGEVNALVANKDIKQEIVMCRDDEKFDKLIDILKELTKEAEPADGPTPAGGGKHHAKVIVFVAKKISCHDLANRLWDDGFAVDSLHGDRAQWERTRVMTAF 430 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12200.1681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12200.1681.1 >prot_H-elongata_contig12200.1681.1 ID=prot_H-elongata_contig12200.1681.1|Name=mRNA_H-elongata_contig12200.1681.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=459bp PLNLHRILTEITMDANKAAAKNLKKLLKKKAKAASAEASAGRLRTPSMDLback to top mRNA from alignment at H-elongata_contig12200:157..2981- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12200.1681.1 ID=mRNA_H-elongata_contig12200.1681.1|Name=mRNA_H-elongata_contig12200.1681.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2825bp|location=Sequence derived from alignment at H-elongata_contig12200:157..2981- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12200:157..2981- >mRNA_H-elongata_contig12200.1681.1 ID=mRNA_H-elongata_contig12200.1681.1|Name=mRNA_H-elongata_contig12200.1681.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2754bp|location=Sequence derived from alignment at H-elongata_contig12200:157..2981- (Himanthalia elongata Himel1 dioecious)back to top |