mRNA_H-elongata_contig121875.1674.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: A0A6H5L844_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L844_9PHAE) HSP 1 Score: 180 bits (456), Expect = 2.080e-47 Identity = 143/397 (36.02%), Postives = 184/397 (46.35%), Query Frame = 1
Query: 1 QANLSLGLRFGHASEVGSRRYMEDRTTAIGDIFQP--------RAPRYIGNRRIEVGASDSPCSL---------LVSDGTGDASTPSPTLYPSV--PPSPSGVGDRGVEDVG-GGEASHS------------------------TPVLKTP--AAFFAVYDGHDGDEVAEALHRKFHEVLAKQECFWDSVPKALEHSCYEMDAACLNGQLQRLQQRRRLR----------------------------------------------------AADFSDDDDNDT---GAVAPVSGRRETE-----GATPVLARGKA--VSSDRDARSRLERAPPNRTGGSTAAVAVITRIGEAATIYVSNVGDCRAVLSRGGVAIDLTSDHRFSRIDERTRIKEAGG 867
QANL++G+R+GH++E+GSRR MEDRT A+ DIF+ R+ + + I ++ SP S G +TP +V P + +G G ED G GG A+ + +P L TP AAFF VYDGHDGD VAEAL + H+++AKQ+CF DS+ A+E CYEMD ACL Q + L + R +A S G++ G E E G P+ +R + SS D RSR A P TGG+TA VAV T++G+ IY NVGDCRAVL R GVAIDLTSDHR SR DER R+KEAGG
Sbjct: 699 QANLTVGVRYGHSAEIGSRRVMEDRTVAVADIFKADATPSFRSRSEGFFPSSIILSRSNSSPRSSGKDEAARRRFFPPGAVAQATPCAVATVAVGDPAATAGTGAMAPEDTGMGGLAATNEEKETTAEKGGASGREEKQRSPPMSPSLSTPLCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQKCFTDSISAAIERGCYEMDIACLEAQFRMLGRDRXXXXXXXXXXXXXXXXXXXGETLSAGXXXXXXXXXXXXDAXXXXXXXXXXXXXXXSAAVSSPRGGGCDACGSILENPGGGEVEDYGSGGGKPLASRRRPREASSSSDVRSRPSGASPGMTGGATAVVAVATKVGKQTVIYAGNVGDCRAVLCRRGVAIDLTSDHRPSRDDERARVKEAGG 1095
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: D8LIK7_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK7_ECTSI) HSP 1 Score: 174 bits (440), Expect = 3.110e-45 Identity = 143/416 (34.38%), Postives = 180/416 (43.27%), Query Frame = 1
Query: 1 QANLSLGLRFGHASEVGSRRYMEDRTTAIGDIFQP--------RAPRYIGNRRIEVGASDSPCSLLVSDGTGDASTPSPTLYPSVPPSPS--GVGDRGVEDVG---------GGEAS---------------------HSTPVLKTP-----AAFFAVYDGHDGDEVAEALHRKFHEVLAKQECFWDSVPKALEHSCYEMDAACLNGQLQRLQQRRRLRAADFSDDDDNDT---------------------------------------------------------------------GAVAPVSGRRETEGATPV----------LA---RGKAVSSDRDARSRLERAPPNRTGGSTAAVAVITRIGEAATIYVSNVGDCRAVLSRGGVAIDLTSDHRFSRIDERTRIKEAGG 867
QANL++G+R+GH++E+GSRR MEDRT A+ DIF+ R+ Y + I S SP S D P+ + + P + + VGD G GG A+ S P+ +P AAFF VYDGHDGD VAEAL + H+++AKQ+CF DS+ A+EH CYEMD ACL+ Q + L + R GA +S + EG V LA R + SS D RSRL P TGG+TA VAV T++G+ IYV NVGDCRAVL R GVAIDLTSDHR SR DER R+KEAGG
Sbjct: 1736 QANLTVGVRYGHSAEIGSRRVMEDRTVAVADIFKADATPSFRSRSEGYFPSSTILSRNSSSPGSGGQDDAARRRFFPAGAVAQATPGAVATVAVGDPAAASTGVVVPADTDTGGLAATKEEKETTEGRGGASGQEQKQRSPPMSPSPSTPLCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQKCFTDSISAAIEHGCYEMDTACLDAQFRVLGRDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRGGGXXXCGACGSMSENQGGEGGDEVEDCGGGVGKPLAPRRRPREASSASDVRSRLSGTSPGMTGGATAVVAVATKVGKQTVIYVGNVGDCRAVLCRRGVAIDLTSDHRPSRDDERARVKEAGG 2151
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: A0A7S0T394_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T394_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 2.150e-12 Identity = 66/197 (33.50%), Postives = 98/197 (49.75%), Query Frame = 1
Query: 286 EASHSTPV-LKTPAAFFAVYDGHDGDEVAEALHRKFHEVLAKQECFWDS-VPKALEHSCYEMDAACLNGQLQRLQQRRRLRAADFSDDDDNDTGAVAPVSGRRETEGATPVLARGKAVS-SDRDARSRLERAPPNRTGGSTAAVAVITRIGEAATIYVSNVGDCRAVLSRGGVAIDLTSDHRFSRIDERTRIKEAGG 867
E +H+T + L AFF VYDGH G EVA + R HEV + + +P+AL S MDA ++ + R L+ + + G V +S + +LAR +A +D + R P G T VAV+ +T+ V+N GD RAVL R G A++++ DH+ + DER RI++AGG
Sbjct: 37 EDAHATVLGLDEDTAFFGVYDGHGGKEVAIYVSRHLHEVFKSNDAYKKGDIPQALIDSFLAMDANMIH-----ISGRDELQEL-VGKGGEREGGGVNDLSSKMRQ----AILARARANGDADVEGDGRPWEGPQ---AGCTCVVAVV----RGSTLVVANAGDSRAVLCRRGTAVEMSRDHKPTDEDERARIQKAGG 216
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: C1EH95_MICCC (Protein-serine/threonine phosphatase n=3 Tax=Micromonas TaxID=38832 RepID=C1EH95_MICCC) HSP 1 Score: 75.9 bits (185), Expect = 5.460e-12 Identity = 69/198 (34.85%), Postives = 92/198 (46.46%), Query Frame = 1
Query: 286 EASHSTPV-LKTPAAFFAVYDGHDGDEVAEALHRKFHEVLAKQECFW-DSVPKALEHSCYEMDAACLNGQLQRLQQRRRLRAADFSDDDDNDTGAVAPVSGRRETEGATPVLARGKAVSSDRDARSRLERAPP--NRTGGSTAAVAVITRIGEAATIYVSNVGDCRAVLSRGGVAIDLTSDHRFSRIDERTRIKEAGG 867
E +HST + L AFF VYDGH G EVA + R HEV + E + +P+ L + MD L+ + + L + + D G S R+ +LAR +A D D L+ P GST VAV+ + V+N GD RAVLSR G A+ L+ DH+ DER RI AGG
Sbjct: 37 EDAHSTVLGLDEDTAFFGVYDGHGGKEVAVYISRHLHEVFKECESYKRGDIPQGLIDAFLAMDTNMLH-----VSGKDELN--ELAGKSDGGRGGADLSSKMRQA-----ILARARANGDDVDFEDDLDDEGPWEGPQAGSTCVVAVV----RGDKLVVANAGDSRAVLSRRGEALALSRDHKPMDDDERARIVNAGG 218
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: A0A1Z5R3V2_SORBI (Protein-serine/threonine phosphatase n=3 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1Z5R3V2_SORBI) HSP 1 Score: 74.7 bits (182), Expect = 1.660e-11 Identity = 63/182 (34.62%), Postives = 81/182 (44.51%), Query Frame = 1
Query: 328 FFAVYDGHDGDEVAEALHRKFHEVLAKQECFWDSVPKALEHSCYEMDAACLNGQLQRLQQRRRLRAADFSDDDDNDTGAVAPVSGRRETEGATPVLARGKAVSSDRDARSRLERAPPNRTGGSTAAVAVITRIGEAATIYVSNVGDCRAVLSRGGVAIDLTSDHRFSRIDERTRIKEAGGEL 873
FFAVYDGH G VAEA + H VLA++ L D AA F+ D TG +P P ++D + P RT GSTA VAV+ + I V+N GD RAVLSRGGVA+ L++DH+ R DE R++ AGG +
Sbjct: 125 FFAVYDGHGGARVAEACRERMHVVLAEE--------LGLRRGVGSDDLRW-----------EEAMAASFARVDGEVTGGFSP-----------PXXXXXXQTAADAADTNAGAGNLPYRTVGSTAVVAVVGQ----RRIVVANCGDSRAVLSRGGVAVPLSTDHKPDRPDEMQRVEAAGGRV 272
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: A0A811RSM4_9POAL (Protein-serine/threonine phosphatase n=3 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811RSM4_9POAL) HSP 1 Score: 74.3 bits (181), Expect = 2.330e-11 Identity = 63/182 (34.62%), Postives = 78/182 (42.86%), Query Frame = 1
Query: 328 FFAVYDGHDGDEVAEALHRKFHEVLAKQECFWDSVPKALEHSCYEMDAACLNGQLQRLQQRRRLRAADFSDDDDNDTGAVAPVSGRRETEGATPVLARGKAVSSDRDARSRLERAPPNRTGGSTAAVAVITRIGEAATIYVSNVGDCRAVLSRGGVAIDLTSDHRFSRIDERTRIKEAGGEL 873
FFAVYDGH G VAEA + H VLA++ V L AA F+ D TG AP A + P RT GSTA VAV+ + I V+N GD RAVLSRGGVA+ L++DH+ R DE R++ AGG +
Sbjct: 133 FFAVYDGHGGARVAEACRERMHVVLAEEVGLRRGVGSDLPWE--------------------EAMAASFARVDGEVTGGFAPXXXXXXXXXXXXXXAGAGNL--------------PYRTVGSTAVVAVVGQ----RRIVVANCGDSRAVLSRGGVAVPLSTDHKPDRPDEMQRVEAAGGRV 276
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: A0A812NQS4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NQS4_9DINO) HSP 1 Score: 73.2 bits (178), Expect = 1.030e-10 Identity = 66/216 (30.56%), Postives = 92/216 (42.59%), Query Frame = 1
Query: 325 AFFAVYDGHDGDEVAEALHRKFHEVLAKQECFWDS--VPKALEHSCYEMDA-----------------------ACL----------NGQLQRLQQRRRLRAADFSDDDDNDTGAVAPVSGRRETEGATPVLARGKAVSSDRDARSRLERAPPNRTGGSTAAVAVITRIGEAATIYVSNVGDCRAVLSRGGVAIDLTSDHRFSRIDERTRIKEAGG 867
A+F ++DGH+GD VAEAL + H VLA Q F D + ALE + E+DA AC+ G L R+ A++ T + V G T+ A R + +S + A R S A V G +Y++N GDCRAVLS G+A++LT DH+ E+ RI+ AGG
Sbjct: 836 AYFGIFDGHNGDAVAEALAARLHLVLAAQGEFEDEGDMSTALEGAFAELDAEICEQQARASLQGTASAACAGATACVAVLRWQAVGAGGDLPAAPPTPRMAASEAC------TPPASAVGGFSFTDCAAGTGVRARGMSMGTASPXXXXXAAALRRSQSAATSPVFGHCGRELVLYMANAGDCRAVLSHEGLAVNLTQDHKPKVQAEKARIEAAGG 1045
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: A0A8K1CBS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBS9_PYTOL) HSP 1 Score: 72.8 bits (177), Expect = 1.390e-10 Identity = 62/202 (30.69%), Postives = 93/202 (46.04%), Query Frame = 1
Query: 328 FFAVYDGHDGDEVAEALHRKFHEVLAKQECFWDSVPKALEHSCYEMDAACLNGQLQRLQQRRRLRAAD---------------FSDDDDNDTGAVAPVSGRRETEGATPVLARGKAVSSDRDARSRLERAPPNRTGGSTAAVAVITRIGEA------ATIYVSNVGDCRAVLSRG-GVAIDLTSDHRFSRIDERTRIKEAGG 867
FFAVYDGH+GD+ A L ++ H + F + C +D L Q + + +R+R + F +D+D++ + R T + + G +V+ + RS L P GS A AV+ + E T+YV+N GDCRAVL G+A+DLT DH+ S ER RI+ +GG
Sbjct: 1439 FFAVYDGHNGDDTARFLQKELHHRFLRHSDFPRDPLTTIRDVCELVDEEILEKQNRSVPKRKRTEMEEEIHSINDDDFGEFDGFVEDEDDECHPRGTKAAR--TPSVDSIGSMGSSVAPE--PRSALM---PISFSGSAAVFAVVAKRHEEPDKPAPTTLYVANSGDCRAVLCTSHGLAVDLTKDHKASLDSERERIEASGG 1633
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: A0A0Q3QTE4_BRADI (Protein-serine/threonine phosphatase n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3QTE4_BRADI) HSP 1 Score: 71.6 bits (174), Expect = 1.880e-10 Identity = 65/189 (34.39%), Postives = 84/189 (44.44%), Query Frame = 1
Query: 328 FFAVYDGHDGDEVAEALHRKFHEVLAKQECFWDSVPKALEHSCYEMDAACLNGQLQRLQQRRRLRAADFSDDDDNDTGAVAPVSGRR------ETEGATPVLARGKAVSSDRDARSRLE-RAPPNRTGGSTAAVAVITRIGEAATIYVSNVGDCRAVLSRGGVAIDLTSDHRFSRIDERTRIKEAGGEL 873
FFAVYDGH G VAEA + H VLA++ RRRLRA D GA+ R E A+ G+ V + R + +RT GSTA VAV+ + I V+N GD RAVLSR GVA+ L++DH+ R DE R++ AGG +
Sbjct: 116 FFAVYDGHGGARVAEACRERMHVVLAEELA------------------------------RRRLRA---------DAGAIGDEEDVRVRCCWKEAMAASFARVDGEVVEAAAAGRDDADVDESGSRTVGSTAVVAVVG----SRRIVVANCGDSRAVLSRAGVAVPLSTDHKPDRPDELQRVEAAGGRV 261
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Match: A0A5D6YEV9_9STRA (cGMP-dependent protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEV9_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.090e-9 Identity = 64/225 (28.44%), Postives = 99/225 (44.00%), Query Frame = 1
Query: 325 AFFAVYDGHDGDEVAEALHRKFHEVLAKQECFWDSVPKALEHSCYEMDAACLNGQLQRLQQRRR---------------------LRAADFSDDDDNDTGAVAPVSGRRETEGATPVLARGKAVSSDRDARSRLER-APPNRTGGSTAAVA---------------------VITRIGEAATIYVSNVGDCRAVL-SRGGVAIDLTSDHRFSRIDERTRIKEAGG 867
AFF VYDGH+G++ A L ++ H + F D A+ +C +D L+ Q + + +R+ + DDDD + P+S GA V A V + R+ R + ER A G + AAVA +A ++V+NVGDCRAVL + G+A++LT DH+ + +E+ RI+E+GG
Sbjct: 1397 AFFGVYDGHNGEDTAVWLQKELHHRVLSHPQFTDEPKSAIFEACDTLDHEILDAQNRSMLPKRKRTMVNGDLXXXXXXXXXXXXXXEVQEICDDDDM-ACHLQPIS----FSGAVSVFA----VLAKRNKRQKTERDAAGGEPGATPAAVADAKSEREASXXXXXXXXXXXXXXXXXXDATMLFVTNVGDCRAVLCTADGLAVELTKDHKAALPEEKARIEESGG 1612 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig121875.1674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig121875.1674.1 >prot_H-elongata_contig121875.1674.1 ID=prot_H-elongata_contig121875.1674.1|Name=mRNA_H-elongata_contig121875.1674.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=293bp QANLSLGLRFGHASEVGSRRYMEDRTTAIGDIFQPRAPRYIGNRRIEVGAback to top mRNA from alignment at H-elongata_contig121875:98..1970+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig121875.1674.1 ID=mRNA_H-elongata_contig121875.1674.1|Name=mRNA_H-elongata_contig121875.1674.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1873bp|location=Sequence derived from alignment at H-elongata_contig121875:98..1970+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig121875:98..1970+ >mRNA_H-elongata_contig121875.1674.1 ID=mRNA_H-elongata_contig121875.1674.1|Name=mRNA_H-elongata_contig121875.1674.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1758bp|location=Sequence derived from alignment at H-elongata_contig121875:98..1970+ (Himanthalia elongata Himel1 dioecious)back to top |