mRNA_H-elongata_contig91710.16630.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: D7G461_ECTSI (JMJD6 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G461_ECTSI) HSP 1 Score: 243 bits (621), Expect = 3.600e-77 Identity = 110/120 (91.67%), Postives = 115/120 (95.83%), Query Frame = 1
Query: 1 RRYRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
RRY CKLKCGEDDDGY+VKVK+KYFLRYM+HQ DDSPLY+FDSHFDDH+VAKGLLEDF VP YFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP
Sbjct: 121 RRYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPHYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 240
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: A0A0W8DCB3_PHYNI (Dynein light chain 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DCB3_PHYNI) HSP 1 Score: 194 bits (492), Expect = 8.030e-62 Identity = 83/120 (69.17%), Postives = 103/120 (85.83%), Query Frame = 1
Query: 1 RRYRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
+ Y++ +LKCGEDD G ++++K KYF+ YM +Q DDSPLY+FDS FDDH K LL+D++VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT++H+DPLGTSAWNT++ GRK WVLFPP
Sbjct: 6 KNYKRVQLKCGEDDYGKSIRMKFKYFVTYMNNQTDDSPLYIFDSTFDDHKDTKPLLDDYKVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLIVGRKRWVLFPP 125
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: A0A6V1R424_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R424_HETAK) HSP 1 Score: 201 bits (510), Expect = 1.130e-60 Identity = 93/120 (77.50%), Postives = 101/120 (84.17%), Query Frame = 1
Query: 1 RRYRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
R+Y K KCGEDDDGY+VKV++K+FL Y+E Q DDSPLYVFDS FDD LL DF VPSYFP+DLF LVGER+RPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSG K WVLFPP
Sbjct: 11 RQYGDAKFKCGEDDDGYSVKVRMKHFLDYVERQADDSPLYVFDSGFDDKKETAPLLGDFAVPSYFPEDLFQLVGERKRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGIKRWVLFPP 130
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: A0A4D9CR63_9STRA (JmjC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR63_9STRA) HSP 1 Score: 200 bits (508), Expect = 4.110e-60 Identity = 88/120 (73.33%), Postives = 106/120 (88.33%), Query Frame = 1
Query: 1 RRYRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
RR R+ KCGEDDDG +V+V++K+F +Y+ QKDDSPLY+FDS +DD+ AK LL+D++VPSYFPDD FSLVGERRRPPYRWFLVGP+RSGTS+HIDPLGTSAWNTV++GRK WVLFPP
Sbjct: 106 RRIRKYTFKCGEDDDGRSVRVRLKHFFKYLAKQKDDSPLYIFDSTYDDNKEAKVLLDDYKVPSYFPDDFFSLVGERRRPPYRWFLVGPRRSGTSLHIDPLGTSAWNTVLTGRKRWVLFPP 225
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: A0A3M6VB54_9STRA (JmjC domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB54_9STRA) HSP 1 Score: 197 bits (501), Expect = 6.590e-59 Identity = 83/118 (70.34%), Postives = 102/118 (86.44%), Query Frame = 1
Query: 7 YRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
Y+ +LKCGEDD G ++++K KYF+ Y+ HQ DDSPLY+FDS FDDH+ K LL+D++VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT++H+DPLGTSAWNT++ GRK WVLFPP
Sbjct: 189 YKNVELKCGEDDHGKSIRMKFKYFMTYLNHQTDDSPLYIFDSTFDDHEDTKPLLDDYKVPKYFPEDLFSLVGESRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLIVGRKRWVLFPP 306
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: A0A813B7I6_9DINO (Jmjd6 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B7I6_9DINO) HSP 1 Score: 191 bits (486), Expect = 7.520e-59 Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 1
Query: 10 RQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
R K KCGEDDDGYAVK+K+KYFLRYMEHQ+DDSP+Y+FDS FD+ AK LL + VP YF +DLF LVGE RRPPYRWFL+GPKRSGTS H DPL TSAWN +V GRK WVLFPP
Sbjct: 52 RHRKFKCGEDDDGYAVKMKLKYFLRYMEHQRDDSPMYIFDSTFDEDKRAKTLLSSYSVPEYFNEDLFRLVGESRRPPYRWFLIGPKRSGTSPHTDPLATSAWNALVVGRKRWVLFPP 168
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: G4ZR36_PHYSP (JmjC domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=G4ZR36_PHYSP) HSP 1 Score: 195 bits (496), Expect = 1.720e-58 Identity = 83/120 (69.17%), Postives = 102/120 (85.00%), Query Frame = 1
Query: 1 RRYRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
+ Y++ LKCGEDD+G +++K KYF+ Y+ HQ DDSPLY+FDS FDDH K LL+D++VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT++H+DPLGTSAWNT++ GRK WVLFPP
Sbjct: 154 KNYKRVMLKCGEDDNGKTIRMKFKYFMTYLNHQTDDSPLYIFDSTFDDHKDTKPLLDDYKVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLLVGRKRWVLFPP 273
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: A0A836CFU6_9STRA (JMJD6 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFU6_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.330e-58 Identity = 89/141 (63.12%), Postives = 109/141 (77.30%), Query Frame = 1
Query: 1 RRYRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQK---------------------DDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
R Y + ++KCGEDDDGY++KV++K+F+ Y+++Q+ DDSPLY+FDSHFD+HDV K LL+++RVPSYFPDDLF LVGERRRPPYRWFLVGPKRSGT HIDPLGTSAWNTV+ GRK WV+FPP
Sbjct: 210 RVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPP 350
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: A0A484E8M1_BRELC (JmjC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8M1_BRELC) HSP 1 Score: 194 bits (494), Expect = 2.410e-58 Identity = 83/120 (69.17%), Postives = 104/120 (86.67%), Query Frame = 1
Query: 1 RRYRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
R+Y++ + KCGEDD G ++++K+KYFL Y+ +Q DDSPLY+FDS FDDH K LLED++VP YFP+DLFSLVGE RRPPYRWFL+GPKRSGT++HIDPLGTSAWNT++ GRK W+LFPP
Sbjct: 141 RKYKRVEFKCGEDDYGKSIRMKLKYFLIYLTYQIDDSPLYIFDSSFDDHVDTKSLLEDYQVPKYFPEDLFSLVGEDRRPPYRWFLIGPKRSGTTLHIDPLGTSAWNTLIVGRKRWILFPP 260
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Match: V9EZE5_PHYPR (JmjC domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9EZE5_PHYPR) HSP 1 Score: 194 bits (492), Expect = 5.520e-58 Identity = 83/120 (69.17%), Postives = 103/120 (85.83%), Query Frame = 1
Query: 1 RRYRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDVAKGLLEDFRVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPP 360
+ Y++ +LKCGEDD G ++++K KYF+ YM +Q DDSPLY+FDS FDDH K LL+D++VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT++H+DPLGTSAWNT++ GRK WVLFPP
Sbjct: 150 KNYKRVQLKCGEDDYGKSIRMKFKYFVTYMNNQTDDSPLYIFDSTFDDHKDTKPLLDDYKVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLIVGRKRWVLFPP 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig91710.16630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig91710.16630.1 >prot_H-elongata_contig91710.16630.1 ID=prot_H-elongata_contig91710.16630.1|Name=mRNA_H-elongata_contig91710.16630.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp RRYRQCKLKCGEDDDGYAVKVKVKYFLRYMEHQKDDSPLYVFDSHFDDHDback to top mRNA from alignment at H-elongata_contig91710:764..1752+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig91710.16630.1 ID=mRNA_H-elongata_contig91710.16630.1|Name=mRNA_H-elongata_contig91710.16630.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=989bp|location=Sequence derived from alignment at H-elongata_contig91710:764..1752+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig91710:764..1752+ >mRNA_H-elongata_contig91710.16630.1 ID=mRNA_H-elongata_contig91710.16630.1|Name=mRNA_H-elongata_contig91710.16630.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at H-elongata_contig91710:764..1752+ (Himanthalia elongata Himel1 dioecious)back to top |