prot_H-elongata_contig8997.16485.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8997.16485.1
Unique Nameprot_H-elongata_contig8997.16485.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length297
Homology
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BLAST of mRNA_H-elongata_contig8997.16485.1 vs. uniprot
Match: D7FUA9_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUA9_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 5.810e-75
Identity = 159/318 (50.00%), Postives = 200/318 (62.89%), Query Frame = 0 
Query:    1 MYLCLEKAIDMEALEKNGMPMDWSGVLEGEEVVKVFYPKKDKDFDVNEYVKRMGYDRDRDVDKVDKTMFSGLTEEMKKNLAENLPRSSYTEKDDMIPVVSGPKVSPVIDTGVLGV------QASAFPLEPGHISPANDGVGNDDGNGRG--EASPSSTGDVDPGGSPRGNGEVAG---------------DASPDIPLEPNPAVEASRPPRELTARQREVASGLRDTYKRLLGSGMFQR-NPDGTSAEIPDMDELAREYEEDGFMPKDSDFSDEELRKNEAMSMSVMSG----GLDDEF---DFDANDPAVRAAFGLE 287
            +YLCLEK  DMEAL  N MP DW GVLEGEE + V+YP KDKDFDV EYVKRMGYDR+RD+ KVDK MFS LT EMK+NL   LP+SS+T+KDDMIPV++ PKVSPVIDTGVLG+      +  A P E  +++   DG  ++ G G    +A     G  + G +P   G  AG               DA  ++P++   A        ELT RQREVA+GLR TY++L+ +GM Q  NPDGT A++PDM+E+AR YE +GFM K+ DFS+EEL K   M            LDD+    D D +DPA R+AFGL+
Sbjct:  287 LYLCLEKVADMEALAANSMPQDWVGVLEGEEPLNVYYPDKDKDFDVGEYVKRMGYDRERDIGKVDKAMFSDLTAEMKENLQTTLPKSSFTDKDDMIPVMADPKVSPVIDTGVLGLPTPPPREPEAVPDETVNVNA--DGTVSNGGGGAAAIDAEVVREGSWEAGFAPDLGGAAAGGGPDDSAYSPAGFRADADFNVPMKDGEAG-------ELTERQREVAAGLRRTYEKLVKTGMVQETNPDGTPAKMPDMEEMARAYETEGFMFKEGDFSEEELSKYMDMXXXXXXXXAGLALDDDLPGGDIDLDDPATRSAFGLD 595
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8997.16485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUA9_ECTSI5.810e-7550.00CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8997contigH-elongata_contig8997:6225..9077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8997.16485.1mRNA_H-elongata_contig8997.16485.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8997 5756..9107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8997.16485.1 ID=prot_H-elongata_contig8997.16485.1|Name=mRNA_H-elongata_contig8997.16485.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp
MYLCLEKAIDMEALEKNGMPMDWSGVLEGEEVVKVFYPKKDKDFDVNEYV
KRMGYDRDRDVDKVDKTMFSGLTEEMKKNLAENLPRSSYTEKDDMIPVVS
GPKVSPVIDTGVLGVQASAFPLEPGHISPANDGVGNDDGNGRGEASPSST
GDVDPGGSPRGNGEVAGDASPDIPLEPNPAVEASRPPRELTARQREVASG
LRDTYKRLLGSGMFQRNPDGTSAEIPDMDELAREYEEDGFMPKDSDFSDE
ELRKNEAMSMSVMSGGLDDEFDFDANDPAVRAAFGLEGEKKGNGKP*
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