prot_H-elongata_contig8958.16456.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8958.16456.1
Unique Nameprot_H-elongata_contig8958.16456.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length217
Homology
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BLAST of mRNA_H-elongata_contig8958.16456.1 vs. uniprot
Match: D7FNQ1_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ1_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 8.540e-63
Identity = 118/203 (58.13%), Postives = 134/203 (66.01%), Query Frame = 0 
Query:    2 LACAEGDVCAVRAIIDVGGARASARVETKVLASSTPLHIASRYGHAGAAAALLELGAVVDARDTIGMXXXXXXXXXXXXXXXXXXXXXXXXXXX--EGPGGATAYDAARMAGFDDACALLKKRSPAGD--ASATMMRKALEAWLKSLGCEDFLGRFVRVGYDDLQFIAVQGLTEEDLDCIGVPREKLGLRKKLLAMYGVGKFL 200
            LACAEG V  VRAI+++GGAR S   +TKVLASS+PLH+ASRYGHAG AA LLELGAVVDARDT G                              E P  A A D A MAGFDDA  LL+ R+ AG+    A   RK L +WL  LGC +FLGRF+R GYDDLQF+A QGLTE DLDC+GVP +KLGLRKKLLAM+GV  FL
Sbjct:   46 LACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVASRYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLEAGADASSSFEAPYAAKALDMAEMAGFDDAATLLRSRALAGEDGGEAVRRRKTLASWLGVLGCREFLGRFLRAGYDDLQFMASQGLTEADLDCVGVPGDKLGLRKKLLAMHGVEGFL 248
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BLAST of mRNA_H-elongata_contig8958.16456.1 vs. uniprot
Match: A0A7S2FWK0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FWK0_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.600e-16
Identity = 90/198 (45.45%), Postives = 114/198 (57.58%), Query Frame = 0 
Query:    2 LACAEGDVCAVRAIIDVGGARASARVETKVLASS------TPLHIASRYGHAGAAAALLELGAVVDARDTIGMXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPGGATAYDAARMAGFDDACALLKKRSPAGDASATMMRKALEAWLKSLGCEDFLGRFVRVGYDDLQFIAVQGLTEEDLDCIGVPREKLGLRKKLLAM 193
            L  AEG+   V A++  G     ARV+     ++      T LHIA+RYGHA   +AL+  GA V+ RD  G    XXXXXXXXXXXXXXXXXXXXXXXX                  +  ALL+ R  + +AS       L +WL+SLGC  +  RF+  GYD  Q+I+  GL E+D+D + VPR KLGLRKKLLA+
Sbjct:   44 LLAAEGNKAGVEAVLTAG-----ARVDFHAQPAAPGVPWQTALHIAARYGHAEVVSALVSAGADVNLRDGSGFAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRELAALLRTRKASPEASD---HDKLASWLESLGCAKYTTRFLDAGYD-FQYISEHGLAEDDIDLVQVPRTKLGLRKKLLAL 232
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BLAST of mRNA_H-elongata_contig8958.16456.1 vs. uniprot
Match: A0A482UJW8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UJW8_9ARCH)

HSP 1 Score: 60.5 bits (145), Expect = 1.240e-8
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0 
Query:  143 SLGCEDFLGRFVRVGYDDLQFIAVQGLTEEDLDCIGVPREKLGLRKKLLAMYGVGKF 199
            +LG  ++L RF+  GYD L FI   GL++ DLDCIGVP  K+GLR+K+  ++G+ +F
Sbjct:    9 TLGGSEYLQRFLDAGYD-LPFIHTHGLSDVDLDCIGVPVNKMGLRRKMSKLHGLDRF 64
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8958.16456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNQ1_ECTSI8.540e-6358.13Chain A, Crystal Structure Of A Designed Full Cons... [more]
A0A7S2FWK0_9STRA5.600e-1645.45Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A482UJW8_9ARCH1.240e-849.12Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 34..49
score: 35.99
coord: 82..96
score: 34.04
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 66..95
e-value: 0.036
score: 23.2
coord: 33..62
e-value: 0.089
score: 21.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 66..98
score: 11.915
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 33..65
score: 11.728
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 131..194
e-value: 6.6E-13
score: 50.6
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 130..191
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..94
e-value: 2.0E-10
score: 41.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..119
score: 23.87
IPR001660Sterile alpha motif domainPFAMPF07647SAM_2coord: 137..191
e-value: 5.5E-5
score: 23.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..125
e-value: 7.9E-24
score: 86.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..121
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 22..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8958contigH-elongata_contig8958:1302..2362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8958.16456.1mRNA_H-elongata_contig8958.16456.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8958 1290..2362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8958.16456.1 ID=prot_H-elongata_contig8958.16456.1|Name=mRNA_H-elongata_contig8958.16456.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=217bp
MLACAEGDVCAVRAIIDVGGARASARVETKVLASSTPLHIASRYGHAGAA
AALLELGAVVDARDTIGMTSLHFAAAKGHLRTIDVLLSGGADASAEGPGG
ATAYDAARMAGFDDACALLKKRSPAGDASATMMRKALEAWLKSLGCEDFL
GRFVRVGYDDLQFIAVQGLTEEDLDCIGVPREKLGLRKKLLAMYGVGKFL
GKLHDEKRDRATSGRST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR013761SAM/pointed_sf
IPR020683Ankyrin_rpt-contain_dom
IPR001660SAM
IPR036770Ankyrin_rpt-contain_sf