mRNA_H-elongata_contig8938.16440.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 124 bits (312), Expect = 2.430e-33 Identity = 61/70 (87.14%), Postives = 64/70 (91.43%), Query Frame = 1
Query: 1 DPLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLLRHSWKIVE 210
DPLDWWRV+ ADFP+LA LARRVLAIPATQAESERLFS GNIVTK RN LAP+TVELLVLLRHSWKIVE
Sbjct: 222 DPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 291
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 102 bits (253), Expect = 2.750e-25 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1
Query: 28 SADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLLRHSWKIVE 210
S DFP+LA LARRVLAIPATQA+SERLFS GNIVTK RN LAP+TVELLVLLRHSWKIVE
Sbjct: 151 STDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 211
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.800e-16 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 4 PLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLLRHS 195
PL+WWRVK+ ++P LA LARRVL IPA QA+SER+FS G +VTKTR ++ P V L+V LR++
Sbjct: 480 PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 3.310e-16 Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 1 DPLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLLRHSWKIVE 210
+PLD WR K ++P LA LARRVLAIP++QA+SER+FS G VT TR++L VELLV LR+ W +V+
Sbjct: 482 NPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVD 551
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: A0A420IYG9_9PEZI (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Golovinomyces cichoracearum TaxID=62708 RepID=A0A420IYG9_9PEZI) HSP 1 Score: 74.7 bits (182), Expect = 2.660e-15 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 1 DPLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLLRHSWKI 204
DPL +W+ S+ P LAILARRVLAIPAT A ER FS + NI+T+ R +L P+TV+ L+LL+ SW +
Sbjct: 58 DPLLYWKNNSSRLPILAILARRVLAIPATSASIERAFSVSNNIITRNRTRLLPNTVKKLILLK-SWDL 124
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: R7TXD1_CAPTE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=2 Tax=Capitella teleta TaxID=283909 RepID=R7TXD1_CAPTE) HSP 1 Score: 72.4 bits (176), Expect = 4.400e-15 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 1 DPLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLL 186
DPL WW K A +P++A++AR +LA+PA+ +ER+FS GNIVT R KL S V+ L+ L
Sbjct: 26 DPLKWWAAKEAAYPSVAVIARHILAVPASSVPAERIFSLAGNIVTNKRTKLTSSNVDSLIFL 87
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: R7UJ35_CAPTE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UJ35_CAPTE) HSP 1 Score: 71.6 bits (174), Expect = 4.890e-15 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 1 DPLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLL 186
DPL WW K A +P++A++AR +LA+PA+ +ER+FS GNIVT R KL S V+ L+ L
Sbjct: 3 DPLKWWAAKEAAYPSVAVIARHILAVPASSVPAERIFSLGGNIVTNKRTKLTSSNVDSLIFL 64
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: UPI002013FBC1 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013FBC1) HSP 1 Score: 75.5 bits (184), Expect = 2.580e-14 Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 1 DPLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLL 186
DPL WWRV +P L I+AR+ L +PAT A SERLFS GNIVT TR+ L P+ V +LV L
Sbjct: 440 DPLAWWRVHKISYPQLCIMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKPAKVNILVFL 501
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: A0A6P6NAP0_CARAU (zinc finger BED domain-containing protein 1-like n=7 Tax=Clupeocephala TaxID=186625 RepID=A0A6P6NAP0_CARAU) HSP 1 Score: 75.5 bits (184), Expect = 2.620e-14 Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 1 DPLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLL 186
DPL WWRV +P L I+AR+ L +PAT A SERLFS GNIVT TR+ L P+ V +LV L
Sbjct: 599 DPLAWWRVHKISYPQLCIMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKPAKVNILVFL 660
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Match: UPI001C5718BC (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Cyprinus carpio TaxID=7962 RepID=UPI001C5718BC) HSP 1 Score: 75.1 bits (183), Expect = 2.680e-14 Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 1 DPLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKLAPSTVELLVLL 186
DPL WWRV +P L I+AR+ L +PAT A SERLFS GNIVT TR+ L P V +LV L
Sbjct: 295 DPLAWWRVHKISYPQLCIMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKPEKVNILVFL 356 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8938.16440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8938.16440.1 >prot_H-elongata_contig8938.16440.1 ID=prot_H-elongata_contig8938.16440.1|Name=mRNA_H-elongata_contig8938.16440.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp DPLDWWRVKSADFPNLAILARRVLAIPATQAESERLFSYTGNIVTKTRNKback to top mRNA from alignment at H-elongata_contig8938:6450..6659- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8938.16440.1 ID=mRNA_H-elongata_contig8938.16440.1|Name=mRNA_H-elongata_contig8938.16440.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=210bp|location=Sequence derived from alignment at H-elongata_contig8938:6450..6659- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8938:6450..6659- >mRNA_H-elongata_contig8938.16440.1 ID=mRNA_H-elongata_contig8938.16440.1|Name=mRNA_H-elongata_contig8938.16440.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=420bp|location=Sequence derived from alignment at H-elongata_contig8938:6450..6659- (Himanthalia elongata Himel1 dioecious)back to top |