mRNA_H-elongata_contig88971.16407.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: D7FUB7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUB7_ECTSI) HSP 1 Score: 343 bits (879), Expect = 5.530e-114 Identity = 178/226 (78.76%), Postives = 191/226 (84.51%), Query Frame = 1
Query: 1 VTGRRLSAHYPVLLLM-ASAPQEHLQGYKLPQVWTDLVRPEEVGDLMRTTCNRPLKVVNMIASEIKAVPYSSEDWSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQEIGLLIEDPFQSALSLEIMCNTLYSDVMQTTG-QDPTLPQQPITMQGGIAAVDFANTRVPLEGEVLPLSARCRHP 672
V GRRL LL A QEHLQGYKLP+VW DL+RPEEV DLM T CNRPLKVVNMI+ EIK+VPY EDWSSRERLAILSMCNKL TIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVV LATWALFGIQEIGLLIEDPFQSALSL+IMCN++Y+DVMQT G DPTLPQQPI MQ GIA D +TRV + +V+PLSARC+HP
Sbjct: 234 VFGRRLVQRIANLLACHAVILQEHLQGYKLPRVWEDLLRPEEVRDLMTTNCNRPLKVVNMISREIKSVPYRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVFLATWALFGIQEIGLLIEDPFQSALSLDIMCNSVYTDVMQTVGVADPTLPQQPIPMQVGIAVADLQDTRV--DQDVVPLSARCKHP 457
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: A0A6V2T5N7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2T5N7_HETAK) HSP 1 Score: 184 bits (466), Expect = 1.660e-52 Identity = 96/179 (53.63%), Postives = 124/179 (69.27%), Query Frame = 1
Query: 28 YPVLLLMASAPQEHLQGYKLPQVWTDLVRPEEVGDLMRTTCNRPLKVVNMIASEIKAVPYSSEDWSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQEIGLLIEDPFQSALSLEIMCNTLYSDVMQTTGQDPTLP 564
+P++L QEHLQG + P + E+ +L R + NRPL +VN IA +K V YS+ W+SRERLA+L++ N LSDTIG CERLVQTPVPL Y RHT+RFL++W LPL + G+MG P +GL WALFGIQEIGL IEDPF+ AL LE++ +T+Y+DV+QT G LP
Sbjct: 235 FPIVL------QEHLQGGEKPHRTEYFLEAEDYLELGRAS-NRPLCLVNKIAKVVKGVEYSAA-WTSRERLALLALVNSLSDTIGACERLVQTPVPLAYTRHTNRFLSLWVLSLPLTLAGDMGWGAVPAMGLVAWALFGIQEIGLTIEDPFRRALKLEVIADTIYADVIQTMGSRDVLP 405
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: A0A7S3ZCR8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCR8_9EUKA) HSP 1 Score: 157 bits (397), Expect = 1.240e-44 Identity = 73/150 (48.67%), Postives = 102/150 (68.00%), Query Frame = 1
Query: 127 GDLMRTTCNRPLKVVNMIASEIKAVPYSSED------------WSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQEIGLLIEDPFQSALSLEIMCNTLYSDVMQT 540
+ ++ NRPL + N++A+E+ +P E +SSRERLA+L M + ++ IGGCER+VQTPVPL+Y RHTSRFLT WC LP+ +V E+G A PV L WA+FGIQEIGL+IE+PF+ AL+L + CNT++ D+ +T
Sbjct: 1 AESLKRVSNRPLYIANLLAAEVHGIPDQGETHARSSPGSGGVGFSSRERLAMLKMVDDMTGYIGGCERIVQTPVPLNYARHTSRFLTFWCLALPMALVSELGFAVVPVTALVVWAMFGIQEIGLMIEEPFRRALALHVFCNTIHHDIEET 150
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: A0A7S4DXN2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXN2_9EUKA) HSP 1 Score: 164 bits (415), Expect = 5.270e-44 Identity = 85/163 (52.15%), Postives = 118/163 (72.39%), Query Frame = 1
Query: 61 QEHLQGYKLPQ---VWTDLVRPEEVGDLMRTTCNRPLKVVNMIASEIKAVPYSSEDWSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQEIGLLIEDPFQSALSLEIMCNTLYSDVMQT 540
++HL ++L + V L+ P++ L R T NRPL V+ M+ I +P S ++SRERLA+L +KL++ +G ER+VQTPVPL+Y RHTSRFLT WC LP+ IVGE+G A+ PV+ L TWAL+GIQEIGL+IE+PF+ +LSL + CNT+Y+DVM+T
Sbjct: 290 KQHLTEFRLNESRFVEQVLLSPQDRIALGRAT-NRPLAVLLMLGQAIHEIP-DSPTFASRERLAMLRTVDKLTECMGAAERIVQTPVPLNYARHTSRFLTFWCLTLPIAIVGELGFASIPVMALVTWALYGIQEIGLMIEEPFRRSLSLHVFCNTIYTDVMET 450
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: A0A7S2V428_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V428_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.100e-40 Identity = 73/149 (48.99%), Postives = 105/149 (70.47%), Query Frame = 1
Query: 106 LVRPEEVGDLMRTTCNRPLKVVNMIASEIKAVPYSSEDWSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQEIGLLIEDPFQS--ALSLEIMCNTLYSDVMQTTG 546
L+ P +V + M+ NRPL V+ +A E KA P ++ W+SRERL ++ M ++LS+ +G CERL+Q PVPL Y RHTSRFLTIW LPL++ +MG+AT P +G+ +W L+GIQE+GL+IEDPF++ L LE N ++ D++ T G
Sbjct: 132 LLPPGDVSE-MKHASNRPLWVLGKLAVECKATPLNALTWTSRERLTLVKMLDRLSEGLGACERLIQIPVPLAYARHTSRFLTIWVMSLPLMMAKDMGIATVPALGVISWGLYGIQELGLIIEDPFKNRQVLRLEHFSNRIFQDILDTLG 279
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: A0A7S2G241_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G241_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.630e-40 Identity = 82/174 (47.13%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 28 YPVLLLMASAPQEHLQGYKLPQVWTDLVRPEEVGDLMRTTCNRPLKVVNMIASEIKAVP--YSSED--WSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQEIGLLIEDPFQSALSLEIMCNTLYSDVMQ 537
YP +L EH+ T+L+ E+ +L R N+PL ++ ++ EIKA+P +S + +SSRERL L + ++ ++I CERLVQTPVPL+YVRHTSR LTIWC LPL + E+GM T PV+ +WALFGIQEIGL+IE+PF+ +L LE+M T+ DVM+
Sbjct: 87 YPYILF------EHVTTKTCKNQVTNLLTREDKQELKRMG-NKPLFILFLLGREIKAIPDQHSGDQIMFSSRERLTFLKLVEQMGNSISQCERLVQTPVPLNYVRHTSRLLTIWCLTLPLALASELGMITVPVLFCISWALFGIQEIGLMIEEPFRRSLRLEVMTKTISDDVME 253
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: A0A7S0W3I9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W3I9_9CRYP) HSP 1 Score: 148 bits (374), Expect = 6.670e-38 Identity = 83/189 (43.92%), Postives = 114/189 (60.32%), Query Frame = 1
Query: 4 TGRRLS---AHYPVLLLMASAPQEHLQGYKLPQVWTDLVRPEEVGDL--MRTTCNRPLKVVNMIASEIKAVPYSSEDWSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQEIGLLIEDPFQSA------LSLEIMCNTLYSDVMQ 537
T RR++ +PV L Q+H G+ P+ DL+R DL +RT NRP+ + N +A +PYS E W+SRERLA++++ N++S +G CERLVQTP+PLHY RHTSRFL ++ LPL +V E+G P V W LFG+QEIGL+IE+PF + L L I C T+ DV +
Sbjct: 339 TSRRMADLICAFPVAL------QQHALGFLGPEQEDDLMRLVGEPDLEIIRTAANRPVCIANRMALVAHEIPYS-EQWTSRERLAMMALVNEISKCVGSCERLVQTPIPLHYARHTSRFLAVFTLTLPLFLVQEVGFMAVPAVACVVWCLFGVQEIGLMIENPFATTKEGNWGLPLNIFCKTVRHDVWE 520
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: A0A7S0XTE6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XTE6_HEMAN) HSP 1 Score: 146 bits (369), Expect = 2.530e-37 Identity = 82/189 (43.39%), Postives = 113/189 (59.79%), Query Frame = 1
Query: 4 TGRRLS---AHYPVLLLMASAPQEHLQGYKLPQVWTDLVRPEEVGDL--MRTTCNRPLKVVNMIASEIKAVPYSSEDWSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQEIGLLIEDPFQSA------LSLEIMCNTLYSDVMQ 537
T RR++ +PV L Q+H G+ P+ DL+R DL +RT NRP+ + N +A +PYS + W+SRERLA++ + N++S +G CERLVQTP+PLHY RHTSRFL ++ LPL +V E+G P V W LFG+QEIGL+IE+PF + L L I C T+ DV +
Sbjct: 356 TSRRMADLICAFPVAL------QQHALGFLGPEQEHDLMRLVGEPDLEIIRTAANRPVCIANRMALVAHEIPYSDQ-WTSRERLAMMGLVNEISKCVGSCERLVQTPIPLHYARHTSRFLAVFTLTLPLFLVQEVGFMAVPAVACVVWCLFGVQEIGLMIENPFATTKEGNWGLPLNIFCKTVRHDVWE 537
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: L1IYQ9_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IYQ9_GUITC) HSP 1 Score: 140 bits (353), Expect = 4.090e-37 Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 1
Query: 55 APQEHLQGYKLPQVWTDLVR---PEEVGDLMRTTCNRPLKVVNMIASEI-KAVPYSSEDWSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQ-EIGLLIEDPFQSALSLEIM 507
A + HL+G+ P +L R P + +++ NRPL +V ++S I VPY S+ W+SRERLA+L M N+L +GGCER+VQTP+PLHY RHT RF+ ++C LPLV +GEMG+ P V W L+G+Q EIGLLIE+PF S E+M
Sbjct: 132 ALKHHLEGFMGPDQEEELARLLNPLDRPGVLQAV-NRPLYIVQAMSSVITNDVPYQSDRWTSRERLAVLGMINELGKCVGGCERIVQTPIPLHYARHTGRFMGLFCLTLPLVFIGEMGLLAVPAVACVVWCLYGVQQEIGLLIENPFSR--STEVM 284
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Match: A0A7S1UCQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCQ9_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.960e-36 Identity = 81/184 (44.02%), Postives = 118/184 (64.13%), Query Frame = 1
Query: 7 GRRLSAHYPVLLLMASAPQEHLQGYKLPQVWTDLVRPEEVGDLMRTTCNRPLKVVNMIASEIKAVPY----SSED-----WSSRERLAILSMCNKLSDTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEMGMATAPVVGLATWALFGIQEIGLLIEDPFQSALSLEIMCNTLYSDV 531
GR L A +P +L +EHL G + + L + E+ + NRP+ ++N +++ + VP S+E+ +SSRERL++L+M L +G ERLVQTPVPL Y RHTSRFL++WC LP V+VGE+G+ T P++ L TWALFGIQEIGL+IE+PF +L L ++C+++ DV
Sbjct: 105 GRMLCA-FPWVL------REHLTGLPASK-YLSLEKKEKRA--LAEARNRPMYIINKLSAALAMVPDQDVGSAEELPGHAFSSRERLSLLNMLKSLGQRVGAAERLVQTPVPLMYARHTSRFLSMWCLTLPFVLVGELGLWTVPLMTLVTWALFGIQEIGLMIENPFGVSLKLSVICDSISLDV 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88971.16407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig88971.16407.1 >prot_H-elongata_contig88971.16407.1 ID=prot_H-elongata_contig88971.16407.1|Name=mRNA_H-elongata_contig88971.16407.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=224bp VTGRRLSAHYPVLLLMASAPQEHLQGYKLPQVWTDLVRPEEVGDLMRTTCback to top mRNA from alignment at H-elongata_contig88971:259..2172+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig88971.16407.1 ID=mRNA_H-elongata_contig88971.16407.1|Name=mRNA_H-elongata_contig88971.16407.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1914bp|location=Sequence derived from alignment at H-elongata_contig88971:259..2172+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig88971:259..2172+ >mRNA_H-elongata_contig88971.16407.1 ID=mRNA_H-elongata_contig88971.16407.1|Name=mRNA_H-elongata_contig88971.16407.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1344bp|location=Sequence derived from alignment at H-elongata_contig88971:259..2172+ (Himanthalia elongata Himel1 dioecious)back to top |