mRNA_H-elongata_contig88946.16402.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7G568_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G568_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 5.100e-138 Identity = 178/227 (78.41%), Postives = 206/227 (90.75%), Query Frame = 1
Query: 31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
ND+HK+LI Q+DVWGGAAK +PRIFCG++TY NHDTK+KAIK+TWASRCDGFVAFSD+VDL VPSFKIKHEGPEEW+NMWQKSRAIWKYI+ HY +D+DWFVLGGDDIF+IVENLRKYLLS+DIKKAAGG +GG+ PMYLGRRFRPKG++ RIFNSGGA+Y+LNQ +++LLASHLDD +C H++CSWEDV VA CLRQHGVVA DTRD LGRERFHPFTP H+
Sbjct: 101 NDSHKQLIAQVDVWGGAAKTAPRIFCGVYTYHANHDTKIKAIKETWASRCDGFVAFSDQVDLAVPSFKIKHEGPEEWDNMWQKSRAIWKYIDRHYINDFDWFVLGGDDIFLIVENLRKYLLSDDIKKAAGGFKDGGSVPMYLGRRFRPKGNNDRIFNSGGAAYLLNQKSVRLLASHLDDPSCHPHQQCSWEDVNVAACLRQHGVVAHDTRDGLGRERFHPFTPGQHL 327
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: A0A6H5JMC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC5_9PHAE) HSP 1 Score: 372 bits (956), Expect = 4.610e-126 Identity = 164/227 (72.25%), Postives = 200/227 (88.11%), Query Frame = 1
Query: 31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
ND+HK+++ +DVW GA+K PRIFCGIFT++KNH TKVKAIK+TWA+ CDGFVAFSD D ++ +F+I+HEGPEE++NMWQKSRAIWKYINFHYK+D+DWF+LGGDD+F+IVENLRKYLLS+DI +AAGG +NGG NPMYLGRR RP DD IFNSGGASYVLNQA+++LLAS+LD++ACQ H+K SWEDV VA CL+++GVVAFDTRD GRERFHP+TPA H
Sbjct: 125 NDDHKEMLSHVDVWEGASKTMPRIFCGIFTHKKNHFTKVKAIKETWAANCDGFVAFSDAADPDLHTFQIEHEGPEEYDNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDDIMRAAGGRINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVRLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDESGRERFHPYTPAVHF 351
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FK30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK30_ECTSI) HSP 1 Score: 367 bits (942), Expect = 4.910e-125 Identity = 168/226 (74.34%), Postives = 197/226 (87.17%), Query Frame = 1
Query: 34 DNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
D+HKKL+ QIDVW GA + +PRIFCGI+T++ NH TKVKA+K+TWAS CDGFVAFSD DL + +FKIKHEGPEE++NMWQK+RAIWKYINFHYKDD+DWFVLGGDD+F+IVENLRKYLLS++IK AAGGL NGG NPMYLGRRFR G+DR I+N+GG SYVLNQA++ LLASHLDD+ACQ H WED+ VA CL+++GV AFDTRDALGRERFHPFTPA H
Sbjct: 52 DDHKKLLAQIDVWEGAEEGAPRIFCGIYTHENNHATKVKAVKETWASHCDGFVAFSDVTDLELHTFKIKHEGPEEYSNMWQKARAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKYLLSDEIKGAAGGLENGGPNPMYLGRRFRFIGEDR-IYNNGGPSYVLNQASVGLLASHLDDDACQPHAAKHWEDILVAWCLKKNGVEAFDTRDALGRERFHPFTPAAHF 276
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FK28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK28_ECTSI) HSP 1 Score: 369 bits (947), Expect = 9.300e-124 Identity = 165/227 (72.69%), Postives = 197/227 (86.78%), Query Frame = 1
Query: 31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
ND+HKK++ +DVW GA+K PRIFCGIFT++KNH TKVKAIK+TWA CDGFVAFSD D ++ +F+I+HEGPEE+ NMWQKSRAIWKYINFHYK+D+DWF+LGGDD+F+IVENLRKYLLS++I AAGG +NGG NPMYLGRR RP DD IFNSGGASYVLNQA++ LLAS+LD++ACQ H+K SWEDV VA CL+++GVVAFDTRDA GRERFHP+TPA H
Sbjct: 177 NDDHKKMLTHVDVWEGASKTMPRIFCGIFTHRKNHFTKVKAIKETWAVNCDGFVAFSDAADPDLHTFQIEHEGPEEYGNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDEIMHAAGGGINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVGLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDASGRERFHPYTPAVHF 403
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FTE6_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE6_ECTSI) HSP 1 Score: 368 bits (944), Expect = 3.290e-123 Identity = 164/226 (72.57%), Postives = 189/226 (83.63%), Query Frame = 1
Query: 34 DNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
D+HKKL+DQ VW GA K +PR+FCGI+T+Q NH TKVKAIK+TWAS CDGFVAFSD DL + +F IKHEGPEE+ NMWQKSRAIWKYINFHYKDD+DWFVLGGDD+FIIVENLRKYLLS ++K+AAGGL NGGT P+YLGRR R GDD RI+N+GGASYVLNQA++ LLA HLDD+ CQ H K WEDV + CL+++GV FDTRD LGRERFHPFTP H
Sbjct: 204 DDHKKLLDQTHVWQGARKTTPRVFCGIYTHQNNHATKVKAIKETWASHCDGFVAFSDAADLELQTFMIKHEGPEEYTNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFIIVENLRKYLLSEEVKRAAGGLENGGTTPVYLGRRLRGFGDDNRIYNNGGASYVLNQASVGLLADHLDDDDCQPHTKKPWEDVLIGSCLKKNGVEPFDTRDNLGRERFHPFTPGAHF 429
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FK31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK31_ECTSI) HSP 1 Score: 358 bits (918), Expect = 2.490e-120 Identity = 161/227 (70.93%), Postives = 192/227 (84.58%), Query Frame = 1
Query: 31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
ND+HKKL+ Q+DVW A SPR+FCGI+T+Q NH TKV AIK+TWA CDGFVAFSD D + SFKIKHEGPEE++NMWQKSRAIWKYINFHYKDD+DWFVLGGDD+F+I+ENLRKYLLS++I +AAGGL NGGTNPM+LGRR + G+ RI+N+GGASYV+NQA++ LL +HLDD CQ H K SWEDV V+ CL+ +GV+AFDTRD LGRERFHPF+PA HI
Sbjct: 126 NDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHQNNHATKVMAIKETWARHCDGFVAFSDVADDAILSFKIKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIMENLRKYLLSDEIIRAAGGLQNGGTNPMFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSQCQPHTKQSWEDVLVSRCLKVNGVMAFDTRDDLGRERFHPFSPAVHI 352
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: A0A6H5JVG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG9_9PHAE) HSP 1 Score: 339 bits (869), Expect = 8.010e-113 Identity = 160/240 (66.67%), Postives = 191/240 (79.58%), Query Frame = 1
Query: 31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRK-YLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDV------------QVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
ND+HKKL+ Q+DVW A SPR+FCGI+T+ KNH TKV AIK+TWA CDGFVAFSD D + S IKHEGPEE++NMWQKSRAIWKYINFHYKDD+DWFVLGGDD+F+IVENLRK YLLS++I +AAGGL NGGTNP++LGRR + G+ RI+N+GGASYV+NQA++ LL +HLDD CQ H K SWEDV +V+ CLR +GV+AFDTRD LGRERFHPF+PA HI
Sbjct: 121 NDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHHKNHATKVMAIKETWARHCDGFVAFSDVADDAILS--IKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKVYLLSDEIIRAAGGLQNGGTNPIFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSRCQPHAKQSWEDVLVSISRASFKKTEVSRCLRNNGVMAFDTRDGLGRERFHPFSPAVHI 358
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: A0A6H5L1N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N0_9PHAE) HSP 1 Score: 347 bits (889), Expect = 1.810e-112 Identity = 159/231 (68.83%), Postives = 189/231 (81.82%), Query Frame = 1
Query: 28 RNDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVK---AIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
RND+HKKL+ Q+ VW GAAK +PRIFCGI T +NH T VK AIK+TWAS CDGFVAFSDK D ++ + KIK EG EE NMWQK RAIWKYINFHYK+D+DWF+LGGDD+F+I ENLRKYLLS+++K A GG+ NGGTNPMYLGRR R G+D R++N+G ASYVLNQA++ LLASHLDD+ CQ HRK WED+ V+ CL+++GV AFDTRD LGRERFHPFTPA H
Sbjct: 213 RNDDHKKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKVGRAIKETWASHCDGFVAFSDKTDQDLNTLKIKREGLEEDGNMWQKIRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGINNGGTNPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHF 443
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FK39_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK39_ECTSI) HSP 1 Score: 350 bits (897), Expect = 5.920e-112 Identity = 157/227 (69.16%), Postives = 187/227 (82.38%), Query Frame = 1
Query: 31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
ND+H+KL+ Q+ VW GAAK +PRIFCGI T +NH T VKAIK+TWAS CDGFVAFSDK D + + KIK EG EE NMWQKSRAIWKYINFHYK+D+DWF+LGGDD+F+I ENLRKYLLS+++K A GG+ NGG NPMYLGRR R G+D R++N+G ASYVLNQA++ LLASHLDD+ CQ HRK WED+ V+ CL+++GV AFDTRD LGRERFHPFTPA H
Sbjct: 193 NDDHQKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKAIKETWASHCDGFVAFSDKTDQELSTLKIKREGLEEEGNMWQKSRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGIKNGGANPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHF 419
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: A0A7S2V9L2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9L2_9STRA) HSP 1 Score: 266 bits (681), Expect = 1.230e-86 Identity = 123/213 (57.75%), Postives = 150/213 (70.42%), Query Frame = 1
Query: 70 WGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHH 708
W K P+I C +T K H TKVKA K TWASRCDGF+ SD D VPS K+ H+GPEE+NN+WQK RA WKY+ +HY+D++DWF +GGDD ++IVENLRKYLLS +I++A G P+YLGRRF+PK D IFNSGGA +VLN+ AL++L LD + C + K WEDVQVA CLR HGV +DTRD GRERF PF P HH
Sbjct: 5 WPKGVKTEPKILCITYTISKYHKTKVKAQKHTWASRCDGFIVISDTDDFVVPSVKVPHQGPEEYNNIWQKVRAAWKYVYYHYRDEFDWFYMGGDDTYVIVENLRKYLLSQEIQQAH----KHGKLPLYLGRRFKPK--DGNIFNSGGAGHVLNRRALEILTLSLDSQFCNPNLKGFWEDVQVAKCLRHHGVYPYDTRDDWGRERFLPFAPGHH 211 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig88946.16402.1 >prot_H-elongata_contig88946.16402.1 ID=prot_H-elongata_contig88946.16402.1|Name=mRNA_H-elongata_contig88946.16402.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=239bp RRTTLWPPSRNDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKback to top mRNA from alignment at H-elongata_contig88946:151..2561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig88946.16402.1 ID=mRNA_H-elongata_contig88946.16402.1|Name=mRNA_H-elongata_contig88946.16402.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2411bp|location=Sequence derived from alignment at H-elongata_contig88946:151..2561- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig88946:151..2561- >mRNA_H-elongata_contig88946.16402.1 ID=mRNA_H-elongata_contig88946.16402.1|Name=mRNA_H-elongata_contig88946.16402.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1434bp|location=Sequence derived from alignment at H-elongata_contig88946:151..2561- (Himanthalia elongata Himel1 dioecious)back to top |