mRNA_H-elongata_contig88946.16402.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig88946.16402.1
Unique NamemRNA_H-elongata_contig88946.16402.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7G568_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G568_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 5.100e-138
Identity = 178/227 (78.41%), Postives = 206/227 (90.75%), Query Frame = 1
Query:   31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
            ND+HK+LI Q+DVWGGAAK +PRIFCG++TY  NHDTK+KAIK+TWASRCDGFVAFSD+VDL VPSFKIKHEGPEEW+NMWQKSRAIWKYI+ HY +D+DWFVLGGDDIF+IVENLRKYLLS+DIKKAAGG  +GG+ PMYLGRRFRPKG++ RIFNSGGA+Y+LNQ +++LLASHLDD +C  H++CSWEDV VA CLRQHGVVA DTRD LGRERFHPFTP  H+
Sbjct:  101 NDSHKQLIAQVDVWGGAAKTAPRIFCGVYTYHANHDTKIKAIKETWASRCDGFVAFSDQVDLAVPSFKIKHEGPEEWDNMWQKSRAIWKYIDRHYINDFDWFVLGGDDIFLIVENLRKYLLSDDIKKAAGGFKDGGSVPMYLGRRFRPKGNNDRIFNSGGAAYLLNQKSVRLLASHLDDPSCHPHQQCSWEDVNVAACLRQHGVVAHDTRDGLGRERFHPFTPGQHL 327          
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: A0A6H5JMC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC5_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 4.610e-126
Identity = 164/227 (72.25%), Postives = 200/227 (88.11%), Query Frame = 1
Query:   31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
            ND+HK+++  +DVW GA+K  PRIFCGIFT++KNH TKVKAIK+TWA+ CDGFVAFSD  D ++ +F+I+HEGPEE++NMWQKSRAIWKYINFHYK+D+DWF+LGGDD+F+IVENLRKYLLS+DI +AAGG +NGG NPMYLGRR RP  DD  IFNSGGASYVLNQA+++LLAS+LD++ACQ H+K SWEDV VA CL+++GVVAFDTRD  GRERFHP+TPA H 
Sbjct:  125 NDDHKEMLSHVDVWEGASKTMPRIFCGIFTHKKNHFTKVKAIKETWAANCDGFVAFSDAADPDLHTFQIEHEGPEEYDNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDDIMRAAGGRINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVRLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDESGRERFHPYTPAVHF 351          
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FK30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK30_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 4.910e-125
Identity = 168/226 (74.34%), Postives = 197/226 (87.17%), Query Frame = 1
Query:   34 DNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
            D+HKKL+ QIDVW GA + +PRIFCGI+T++ NH TKVKA+K+TWAS CDGFVAFSD  DL + +FKIKHEGPEE++NMWQK+RAIWKYINFHYKDD+DWFVLGGDD+F+IVENLRKYLLS++IK AAGGL NGG NPMYLGRRFR  G+DR I+N+GG SYVLNQA++ LLASHLDD+ACQ H    WED+ VA CL+++GV AFDTRDALGRERFHPFTPA H 
Sbjct:   52 DDHKKLLAQIDVWEGAEEGAPRIFCGIYTHENNHATKVKAVKETWASHCDGFVAFSDVTDLELHTFKIKHEGPEEYSNMWQKARAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKYLLSDEIKGAAGGLENGGPNPMYLGRRFRFIGEDR-IYNNGGPSYVLNQASVGLLASHLDDDACQPHAAKHWEDILVAWCLKKNGVEAFDTRDALGRERFHPFTPAAHF 276          
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FK28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK28_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 9.300e-124
Identity = 165/227 (72.69%), Postives = 197/227 (86.78%), Query Frame = 1
Query:   31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
            ND+HKK++  +DVW GA+K  PRIFCGIFT++KNH TKVKAIK+TWA  CDGFVAFSD  D ++ +F+I+HEGPEE+ NMWQKSRAIWKYINFHYK+D+DWF+LGGDD+F+IVENLRKYLLS++I  AAGG +NGG NPMYLGRR RP  DD  IFNSGGASYVLNQA++ LLAS+LD++ACQ H+K SWEDV VA CL+++GVVAFDTRDA GRERFHP+TPA H 
Sbjct:  177 NDDHKKMLTHVDVWEGASKTMPRIFCGIFTHRKNHFTKVKAIKETWAVNCDGFVAFSDAADPDLHTFQIEHEGPEEYGNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDEIMHAAGGGINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVGLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDASGRERFHPYTPAVHF 403          
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FTE6_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE6_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 3.290e-123
Identity = 164/226 (72.57%), Postives = 189/226 (83.63%), Query Frame = 1
Query:   34 DNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
            D+HKKL+DQ  VW GA K +PR+FCGI+T+Q NH TKVKAIK+TWAS CDGFVAFSD  DL + +F IKHEGPEE+ NMWQKSRAIWKYINFHYKDD+DWFVLGGDD+FIIVENLRKYLLS ++K+AAGGL NGGT P+YLGRR R  GDD RI+N+GGASYVLNQA++ LLA HLDD+ CQ H K  WEDV +  CL+++GV  FDTRD LGRERFHPFTP  H 
Sbjct:  204 DDHKKLLDQTHVWQGARKTTPRVFCGIYTHQNNHATKVKAIKETWASHCDGFVAFSDAADLELQTFMIKHEGPEEYTNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFIIVENLRKYLLSEEVKRAAGGLENGGTTPVYLGRRLRGFGDDNRIYNNGGASYVLNQASVGLLADHLDDDDCQPHTKKPWEDVLIGSCLKKNGVEPFDTRDNLGRERFHPFTPGAHF 429          
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FK31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK31_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 2.490e-120
Identity = 161/227 (70.93%), Postives = 192/227 (84.58%), Query Frame = 1
Query:   31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
            ND+HKKL+ Q+DVW  A   SPR+FCGI+T+Q NH TKV AIK+TWA  CDGFVAFSD  D  + SFKIKHEGPEE++NMWQKSRAIWKYINFHYKDD+DWFVLGGDD+F+I+ENLRKYLLS++I +AAGGL NGGTNPM+LGRR +  G+  RI+N+GGASYV+NQA++ LL +HLDD  CQ H K SWEDV V+ CL+ +GV+AFDTRD LGRERFHPF+PA HI
Sbjct:  126 NDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHQNNHATKVMAIKETWARHCDGFVAFSDVADDAILSFKIKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIMENLRKYLLSDEIIRAAGGLQNGGTNPMFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSQCQPHTKQSWEDVLVSRCLKVNGVMAFDTRDDLGRERFHPFSPAVHI 352          
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: A0A6H5JVG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG9_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 8.010e-113
Identity = 160/240 (66.67%), Postives = 191/240 (79.58%), Query Frame = 1
Query:   31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRK-YLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDV------------QVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
            ND+HKKL+ Q+DVW  A   SPR+FCGI+T+ KNH TKV AIK+TWA  CDGFVAFSD  D  + S  IKHEGPEE++NMWQKSRAIWKYINFHYKDD+DWFVLGGDD+F+IVENLRK YLLS++I +AAGGL NGGTNP++LGRR +  G+  RI+N+GGASYV+NQA++ LL +HLDD  CQ H K SWEDV            +V+ CLR +GV+AFDTRD LGRERFHPF+PA HI
Sbjct:  121 NDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHHKNHATKVMAIKETWARHCDGFVAFSDVADDAILS--IKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKVYLLSDEIIRAAGGLQNGGTNPIFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSRCQPHAKQSWEDVLVSISRASFKKTEVSRCLRNNGVMAFDTRDGLGRERFHPFSPAVHI 358          
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: A0A6H5L1N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N0_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 1.810e-112
Identity = 159/231 (68.83%), Postives = 189/231 (81.82%), Query Frame = 1
Query:   28 RNDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVK---AIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
            RND+HKKL+ Q+ VW GAAK +PRIFCGI T  +NH T VK   AIK+TWAS CDGFVAFSDK D ++ + KIK EG EE  NMWQK RAIWKYINFHYK+D+DWF+LGGDD+F+I ENLRKYLLS+++K A GG+ NGGTNPMYLGRR R  G+D R++N+G ASYVLNQA++ LLASHLDD+ CQ HRK  WED+ V+ CL+++GV AFDTRD LGRERFHPFTPA H 
Sbjct:  213 RNDDHKKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKVGRAIKETWASHCDGFVAFSDKTDQDLNTLKIKREGLEEDGNMWQKIRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGINNGGTNPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHF 443          
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: D7FK39_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK39_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 5.920e-112
Identity = 157/227 (69.16%), Postives = 187/227 (82.38%), Query Frame = 1
Query:   31 NDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHI 711
            ND+H+KL+ Q+ VW GAAK +PRIFCGI T  +NH T VKAIK+TWAS CDGFVAFSDK D  + + KIK EG EE  NMWQKSRAIWKYINFHYK+D+DWF+LGGDD+F+I ENLRKYLLS+++K A GG+ NGG NPMYLGRR R  G+D R++N+G ASYVLNQA++ LLASHLDD+ CQ HRK  WED+ V+ CL+++GV AFDTRD LGRERFHPFTPA H 
Sbjct:  193 NDDHQKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKAIKETWASHCDGFVAFSDKTDQELSTLKIKREGLEEEGNMWQKSRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGIKNGGANPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHF 419          
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Match: A0A7S2V9L2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9L2_9STRA)

HSP 1 Score: 266 bits (681), Expect = 1.230e-86
Identity = 123/213 (57.75%), Postives = 150/213 (70.42%), Query Frame = 1
Query:   70 WGGAAKLSPRIFCGIFTYQKNHDTKVKAIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYINFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPMYLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSWEDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHH 708
            W    K  P+I C  +T  K H TKVKA K TWASRCDGF+  SD  D  VPS K+ H+GPEE+NN+WQK RA WKY+ +HY+D++DWF +GGDD ++IVENLRKYLLS +I++A       G  P+YLGRRF+PK  D  IFNSGGA +VLN+ AL++L   LD + C  + K  WEDVQVA CLR HGV  +DTRD  GRERF PF P HH
Sbjct:    5 WPKGVKTEPKILCITYTISKYHKTKVKAQKHTWASRCDGFIVISDTDDFVVPSVKVPHQGPEEYNNIWQKVRAAWKYVYYHYRDEFDWFYMGGDDTYVIVENLRKYLLSQEIQQAH----KHGKLPLYLGRRFKPK--DGNIFNSGGAGHVLNRRALEILTLSLDSQFCNPNLKGFWEDVQVAKCLRHHGVYPYDTRDDWGRERFLPFAPGHH 211          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88946.16402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G568_ECTSI5.100e-13878.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMC5_9PHAE4.610e-12672.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK30_ECTSI4.910e-12574.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK28_ECTSI9.300e-12472.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTE6_ECTSI3.290e-12372.57WSC domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FK31_ECTSI2.490e-12070.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVG9_9PHAE8.010e-11366.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1N0_9PHAE1.810e-11268.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK39_ECTSI5.920e-11269.16WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2V9L2_9STRA1.230e-8657.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88946contigH-elongata_contig88946:151..2561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score401.4
Seed ortholog evalue3e-109
Seed eggNOG ortholog2880.D7G568
KEGG koko:K00731
KEGG ReactionR05908
KEGG Pathwayko00512,ko01100,map00512,map01100
KEGG ModuleM00056
EggNOG free text desc.glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
EggNOG OGsKOG2246@1,KOG2246@2759
EC2.4.1.122
COG Functional cat.S
CAZyGT31
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Exons5
Model size717
Cds size717
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88946.16402.1prot_H-elongata_contig88946.16402.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig88946 151..2561 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931290.5654094-CDS-H-elongata_contig88946:150..2551622931290.5654094-CDS-H-elongata_contig88946:150..255Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 151..255 -
1691679775.759223-CDS-H-elongata_contig88946:150..2551691679775.759223-CDS-H-elongata_contig88946:150..255Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 151..255 -
1622931290.5829527-CDS-H-elongata_contig88946:672..9001622931290.5829527-CDS-H-elongata_contig88946:672..900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 673..900 -
1691679775.7728958-CDS-H-elongata_contig88946:672..9001691679775.7728958-CDS-H-elongata_contig88946:672..900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 673..900 -
1622931290.5990098-CDS-H-elongata_contig88946:1251..14081622931290.5990098-CDS-H-elongata_contig88946:1251..1408Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 1252..1408 -
1691679775.7822316-CDS-H-elongata_contig88946:1251..14081691679775.7822316-CDS-H-elongata_contig88946:1251..1408Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 1252..1408 -
1622931290.6147897-CDS-H-elongata_contig88946:1946..20231622931290.6147897-CDS-H-elongata_contig88946:1946..2023Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 1947..2023 -
1691679775.794209-CDS-H-elongata_contig88946:1946..20231691679775.794209-CDS-H-elongata_contig88946:1946..2023Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 1947..2023 -
1622931290.6306462-CDS-H-elongata_contig88946:2411..25611622931290.6306462-CDS-H-elongata_contig88946:2411..2561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 2412..2561 -
1691679775.806069-CDS-H-elongata_contig88946:2411..25611691679775.806069-CDS-H-elongata_contig88946:2411..2561Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig88946 2412..2561 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig88946.16402.1

>prot_H-elongata_contig88946.16402.1 ID=prot_H-elongata_contig88946.16402.1|Name=mRNA_H-elongata_contig88946.16402.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=239bp
RRTTLWPPSRNDNHKKLIDQIDVWGGAAKLSPRIFCGIFTYQKNHDTKVK
AIKQTWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKY
INFHYKDDYDWFVLGGDDIFIIVENLRKYLLSNDIKKAAGGLVNGGTNPM
YLGRRFRPKGDDRRIFNSGGASYVLNQAALKLLASHLDDEACQAHRKCSW
EDVQVADCLRQHGVVAFDTRDALGRERFHPFTPAHHIT*
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mRNA from alignment at H-elongata_contig88946:151..2561-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig88946.16402.1 ID=mRNA_H-elongata_contig88946.16402.1|Name=mRNA_H-elongata_contig88946.16402.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2411bp|location=Sequence derived from alignment at H-elongata_contig88946:151..2561- (Himanthalia elongata Himel1 dioecious)
CGACGAACCACGCTTTGGCCTCCCTCCAGAAACGATAACCACAAGAAACT GATTGACCAGATCGATGTATGGGGAGGCGCCGCCAAGCTCTCCCCGCGAA TATTCTGCGGCATCTTCACGTACCAAAAGAACCACGACACCAAGGTCAAG GTGCGTAAATGTGGGTAACTCCTCGAGGAGCTCTAGAACTATTCGAGTGC GTAGAAAGAGCGCTGGGAATATAGCTTCCTTTTCGCCGTCGGCTTAGCGT GCCTCTCCAAACCGTTCGCTGTCCTCGGTAAAAGTGGTGGTGGTGACGGT TTTGCCGCTGCGCGCGAACTGAGTGCGGTACACGAGGGCGGGTTGAACCC CCTCTCTATGGCGCTTGTCTTTTGCGTATTCCCTCACGCAATTTGTCTTG GGTCCTTGTAACCTTTAAAACTGCGCTCTCTTTTAGCGCCTGCTTGCGCT TCTGCGTGTTTTCACGGAGGCCGAACTTCTATCGCCTCGTTATGCATTAT ATTGCCTTCTATTGCCGTTTTTGTCGGTGTTTTGCCAGGCGATCAAACAA ACCTGGGCCTCTCGCTGCGATGGGTTCGTGGCCTTCAGCGACAAAGTTGA CCTCAACGTCCCCTCGTAAGATATATTACCATTTAATACTACCTGTACGT GTTGTATCTGACACGTTCGGCAGGATTTGGGGGGGGGTGCTATAGACGGA TCCGGCTCTGAGGCTGGGTCTTGAGCATTACATGATGGTTCTATAATTGA ATCCTTTCAGCAGCACAAGAGCGTGAAAATCATCGAGCATGGATGTGATC GGCTCGACGGGAGCATGGGTGAAGGGCCACAACTTGACCTTTTTGTGCTG ATACAGAGATGGAGTAATTATAATAAGCAAGTGGCGATTTCGAGCGCAGA CTCGGTGCTAGCTGTTCTTATCCCCTGTTTTTTGCCGAGTCAATAAAGTC CGGGGATCGCAGATAGTCAAAGCTCGCCGCGGGAGCCGCTGCATCTCCTG GTAGGCCGCTGTCCCACGTCTAGTACTCAAGTCGACATGTCTTGTGGCGA GCGGACTGTGTTAGGTGTCTTGCTACGCTCGCTCTTTCCAGATTTCCCAC ATTTCTGTAGCACATTTATCCCTAATTGGTAGTTGTTTATTTTGTGCGAT CAGGTTCAAGATCAAGCATGAAGGGCCTGAGGAATGGAACAACATGTGGC AAAAGAGCAGGGCAATTTGGAAGTACATAAACTTCCACTACAAGGATGAT TACGACTGGTTCGTGCTCGGCGGCGACGATATCTTCATCATCGTCGAGAA CCTCCGAAAGGTTGAAGGCCCCCCTCGCGGCGGGGCGGGGCGCGGCGTTG CGTTGCAAGTGTGCTGTTTGTATCTCGGCTTCCCAGTCATTCACGTTTGT CTCGGAGATTTCAGTTCATATCAATCGATGTAGCGTAGTCTTCATTGTGT CTCATTTGATTTCTTGATTTAGCTGGCGCGATGCCGCAGCCCACGGATAG AGCAGATGAAGCGAGGGGCGTTGTAACCAATGAGGTTTACGAGAGCAGGG TGCGGTAAGTTACAGCTCGGTCGAAAAGTGAGAAGTCGCCGCAAGCCCTT CGCATCTCCCGCTGAATGCGCGCCCAACCCTACACCCTCTACTCTTTTCT ATACCACGCAGTATCTGTTATCGAATGATATCAAGAAGGCCGCGGGCGGG CTCGTGAACGGCGGCACCAATCCGATGTACTTGGGAAGGCGTTTCCGACC GAAGGGTGACGACAGAAGGATATTCAATTCAGGGGGGGCGTCTTATGTGC TAAACCAGGCAGCTCTGAAGCTGTTGGCGAGTCATTTGGACGACGAGGCG TGTCAGGCGCACAGGAAGTGTTCGTGGGAAGATGTGCAGGTAGGGTTCCG GGAGATGGGGGCTCGTGCAGACCCGGAGTAGACGAGCCGAGGCGAGTGAC GTAACAAAGCGTTGAAGGCCTTGTTTGCCTAAAGCTCTGTGATGCTATTA AGGTATTGCGTGCTTGAAGCCCGGGTCGGCCATTGTGCAGGGTCCCAGAA ACAGAAAGGGTGGTGCTAGCTCGCGCGGAAAGCCCAGCCAGGCACACCAC GGCGGAACTTGCGCGATCACAGTGTTTACCTTATCATATATCTCGTTTGT GTTATTCGGTTCAATTTAATTCCACGGCGGTAGGCGCCACGGCGATGAGC GTGGATTTTATCGCCGTTGCTTCGCCTTTTTCTATGCGCAAGCACCTGAC GTTCGGGTGCGTTTTATTTTGCCTTTATGCTACTGTTATTATTTTTGTAC CGGCAGGTAGCGGACTGCTTGAGGCAACACGGCGTGGTCGCCTTCGACAC ACGAGACGCCCTCGGACGCGAGCGGTTCCACCCGTTTACACCGGCGCACC ACATCACGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig88946:151..2561-

>mRNA_H-elongata_contig88946.16402.1 ID=mRNA_H-elongata_contig88946.16402.1|Name=mRNA_H-elongata_contig88946.16402.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1434bp|location=Sequence derived from alignment at H-elongata_contig88946:151..2561- (Himanthalia elongata Himel1 dioecious)
CGACGAACCACGCTTTGGCCTCCCTCCAGAAACGATAACCACAAGAAACT
GATTGACCAGATCGATGTATGGGGAGGCGCCGCCAAGCTCTCCCCGCGAA
TATTCTGCGGCATCTTCACGTACCAAAAGAACCACGACACCAAGGTCAAG
CGACGAACCACGCTTTGGCCTCCCTCCAGAAACGATAACCACAAGAAACT
GATTGACCAGATCGATGTATGGGGAGGCGCCGCCAAGCTCTCCCCGCGAA
TATTCTGCGGCATCTTCACGTACCAAAAGAACCACGACACCAAGGTCAAG
GCGATCAAACAAACCTGGGCCTCTCGCTGCGATGGGTTCGTGGCCTTCAG
CGACAAAGTTGACCTCAACGTCCCCTCGCGATCAAACAAACCTGGGCCTC
TCGCTGCGATGGGTTCGTGGCCTTCAGCGACAAAGTTGACCTCAACGTCC
CCTCGTTCAAGATCAAGCATGAAGGGCCTGAGGAATGGAACAACATGTGG
CAAAAGAGCAGGGCAATTTGGAAGTACATAAACTTCCACTACAAGGATGA
TTACGACTGGTTCGTGCTCGGCGGCGACGATATCTTCATCATCGTCGAGA
ACCTCCGAAAGGTTCAAGATCAAGCATGAAGGGCCTGAGGAATGGAACAA
CATGTGGCAAAAGAGCAGGGCAATTTGGAAGTACATAAACTTCCACTACA
AGGATGATTACGACTGGTTCGTGCTCGGCGGCGACGATATCTTCATCATC
GTCGAGAACCTCCGAAAGTATCTGTTATCGAATGATATCAAGAAGGCCGC
GGGCGGGCTCGTGAACGGCGGCACCAATCCGATGTACTTGGGAAGGCGTT
TCCGACCGAAGGGTGACGACAGAAGGATATTCAATTCAGGGGGGGCGTCT
TATGTGCTAAACCAGGCAGCTCTGAAGCTGTTGGCGAGTCATTTGGACGA
CGAGGCGTGTCAGGCGCACAGGAAGTGTTCGTGGGAAGATGTGCAGTATC
TGTTATCGAATGATATCAAGAAGGCCGCGGGCGGGCTCGTGAACGGCGGC
ACCAATCCGATGTACTTGGGAAGGCGTTTCCGACCGAAGGGTGACGACAG
AAGGATATTCAATTCAGGGGGGGCGTCTTATGTGCTAAACCAGGCAGCTC
TGAAGCTGTTGGCGAGTCATTTGGACGACGAGGCGTGTCAGGCGCACAGG
AAGTGTTCGTGGGAAGATGTGCAGGTAGCGGACTGCTTGAGGCAACACGG
CGTGGTCGCCTTCGACACACGAGACGCCCTCGGACGCGAGCGGTTCCACC
CGTTTACACCGGCGCACCACATCACGTGAGTAGCGGACTGCTTGAGGCAA
CACGGCGTGGTCGCCTTCGACACACGAGACGCCCTCGGACGCGAGCGGTT
CCACCCGTTTACACCGGCGCACCACATCACGTGA
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