prot_H-elongata_contig87742.16306.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87742.16306.1
Unique Nameprot_H-elongata_contig87742.16306.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
BLAST of mRNA_H-elongata_contig87742.16306.1 vs. uniprot
Match: D7FK18_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK18_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 5.500e-35
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    1 GTAEWPESLAPVAWHKDAKMARLKLGLYHKTNQVADGEVEYRNIRIKGPNGQIRTSPKAEPAGTLYRGCFEDKANDRVLGEKYIIDAHMTNEV 93
            G A WP +L PVAWH+DA   R+KLGLYHKT+QV DG+VEYR+I I+GPNG IRTSP+ +  G LY GCF D  +D V   K  +DAHMTNE+
Sbjct:   53 GRAVWPSNLKPVAWHRDADRVRMKLGLYHKTDQVYDGKVEYRDISIEGPNGIIRTSPEPDHEGHLYVGCFADDDDDHVFSGKKYVDAHMTNEM 145          
BLAST of mRNA_H-elongata_contig87742.16306.1 vs. uniprot
Match: A0A6H5KAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW5_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.990e-32
Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 0
Query:    1 GTAEWPESLAPVAWHKDAKMARLKLGLYHKTNQVADGEVEYRNIRIKGPNGQIRTSPKAEPAGTLYRGCFEDKANDRVLGEKYIIDAHMTNEV 93
            G A WP +L PVAWH+DA   R+KLGLYHK +QV DG+VEYR+I I+GPNG IRTSP+ +  G LY GCF D  +D V   K  +DAHMTNE+
Sbjct:  200 GRAVWPSNLKPVAWHRDADRVRMKLGLYHKIDQVYDGKVEYRDISIEGPNGIIRTSPEPDHEGHLYVGCFADDDDDHVFSGKKYVDAHMTNEM 292          
BLAST of mRNA_H-elongata_contig87742.16306.1 vs. uniprot
Match: D8LDJ9_ECTSI (Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ9_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 9.540e-29
Identity = 54/102 (52.94%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    1 GTAEWPESLAPVAWHKDAKMARLKLGLYHKTNQVADGEVEYRNIRIKGPNGQIRTSPKAEPA---------GTLYRGCFEDKANDRVLGEKYIIDAHMTNEV 93
            G   WP+   PVAW+   KMAR+KLGLYHK  QV DGEVE R++ I+GPNG IRTSP+  P+         G LY GCFED+ + R+ G+KY+ DAHMT  +
Sbjct:  229 GKFVWPKDKTPVAWNNKGKMARMKLGLYHKEEQVGDGEVEIRDVSIEGPNGIIRTSPEESPSPSSKENDSKGHLYLGCFEDEKDKRIFGKKYV-DAHMTTAI 329          
BLAST of mRNA_H-elongata_contig87742.16306.1 vs. uniprot
Match: D8LDH3_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH3_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.550e-20
Identity = 45/88 (51.14%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    1 GTAEWPESLAPVAWHKDAKMARLKLGLYHKTNQVADGEVEYRNIRIKGPNGQIRTSPKAE-----PAGTLYRGCFEDKANDRVLGEKY 83
            G A WP S  PVAW+ DA     KLGLYH  N+VADGEVEY+NI I+GPNG +RTS   +     P G +  GC +D  +DR+L   Y
Sbjct:  223 GKAVWPSSYKPVAWNDDADTIMFKLGLYHIKNKVADGEVEYKNISIQGPNGLLRTSSVGDSDHGPPQGIMSLGCVKDADHDRLLDNIY 310          
BLAST of mRNA_H-elongata_contig87742.16306.1 vs. uniprot
Match: A0A6H5JXY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY2_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.080e-19
Identity = 45/88 (51.14%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    1 GTAEWPESLAPVAWHKDAKMARLKLGLYHKTNQVADGEVEYRNIRIKGPNGQIRTSPKAE-----PAGTLYRGCFEDKANDRVLGEKY 83
            G A WP S  PVAW  DA     KLGLYH  N+VADGEVEY+NI I+GPNG +RTS   +     P G    GC +D  +DR+L   Y
Sbjct:  444 GKAVWPSSYKPVAWSDDADTIMFKLGLYHIKNKVADGEVEYKNISIQGPNGLLRTSSVGDINHGPPQGITSLGCAKDARHDRLLDNIY 531          
BLAST of mRNA_H-elongata_contig87742.16306.1 vs. uniprot
Match: A0A6H5K5S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5S3_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.140e-16
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 GTAEWPESLAPVAWHKDAKMARLKLGLYHKTNQVADGEVEYRNIRIKGPNGQIRTSPK 58
            G   WP+   PVAW+   KMAR+KLGLYHK  QV DGEVE R++ I+GPNG IRTSP+
Sbjct:  266 GKFVWPKDKTPVAWNNKGKMARMKLGLYHKEEQVGDGEVEIRDVSIEGPNGIIRTSPE 323          
BLAST of mRNA_H-elongata_contig87742.16306.1 vs. uniprot
Match: A0A6H5JBB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB3_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.180e-7
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0
Query:   33 QVADGEVEYRNIRIKGPNGQIRTSPKAE-----PAGTLYRGCFEDKANDRVLGEKY 83
            +VADGEVEY+NI I+GPNG +RTS   +     P G    GC +D  +DR+L   Y
Sbjct:  573 KVADGEVEYKNISIQGPNGLLRTSSVGDINHRPPQGITSLGCVKDARHDRLLDNIY 628          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87742.16306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FK18_ECTSI5.500e-3561.29WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAW5_9PHAE2.990e-3260.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDJ9_ECTSI9.540e-2952.94Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D8LDH3_ECTSI1.550e-2051.14WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JXY2_9PHAE1.080e-1951.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5S3_9PHAE1.140e-1662.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBB3_9PHAE4.180e-748.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87742contigH-elongata_contig87742:311..1138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87742.16306.1mRNA_H-elongata_contig87742.16306.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87742 311..1138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87742.16306.1 ID=prot_H-elongata_contig87742.16306.1|Name=mRNA_H-elongata_contig87742.16306.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
GTAEWPESLAPVAWHKDAKMARLKLGLYHKTNQVADGEVEYRNIRIKGPN
GQIRTSPKAEPAGTLYRGCFEDKANDRVLGEKYIIDAHMTNEVR*
back to top