prot_H-elongata_contig8760.16293.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8760.16293.1
Unique Nameprot_H-elongata_contig8760.16293.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length277
Homology
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: D8LJ20_ECTSI (Mitochondrial carrier protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ20_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 2.870e-69
Identity = 131/238 (55.04%), Postives = 163/238 (68.49%), Query Frame = 0
Query:   40 EIPRVMAYCVAACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLSIFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTT-RKRNSTARATGFDAKTRGSALARALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLMAGAPPSSGVGGGAFVAQTWAGAIGQGGLFAGIGTRIFYIGASGATFFVVYEAMKTRLALARKAGPNAKDVRA 276
            ++PR + +C+AA LGDMTG+LWLVP EVVKVQ+QGG HAT+ +A +SIFR  G+ GFYQGF GQV RDVPFR IQLT+YELLR  + T R+R  T  AT     + G  + RA G  G   A  G++G  +  ++S+ DAALLG  AGA+SA  TCPLDV+RTRLM        VGGG   A+TWA AI  GGL +G+GTR+FYIG S A FFVVYEA+K RL +   + P A   +A
Sbjct:  126 QLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLKTWRRRQHTGVATERGDDSGGVPVGRARG--GVATAAAGDDG--EHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLM--------VGGGGGAAETWAAAIKAGGLLSGLGTRVFYIGTSSAVFFVVYEAIKVRLGVVAASSPPAATSKA 351          
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: A0A6V1WYU8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WYU8_HETAK)

HSP 1 Score: 118 bits (296), Expect = 5.810e-28
Identity = 84/223 (37.67%), Postives = 119/223 (53.36%), Query Frame = 0
Query:   40 EIPRVMAYCVAACLGDMTGNLWLVPFEVVKVQIQ--GGSHATIAEATLSIFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALARALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLMAGAPPSSGVGGGAFVAQTWAGAIGQG--GLFAGIGTRIFYIGASGATFFVVYEAMK 258
             + +   Y ++A LGD+TG+ WLVP E+VK+++Q  GG    +A     I    G  GFY+G+ GQ+ RDVPFR IQLTTYE L+   + R RN+   A G D                     EG E G     +S  + A+LG+ AG+ SA +T PLDVI+TR+M G     G  G + +  T A    +G   ++ G+  R+ Y+G S A FF+ YE +K
Sbjct:   69 NVSKTFTYFISAILGDITGSFWLVPSEIVKLRLQSGGGGGLGLAGTIGDILATSGPGGFYKGYTGQIARDVPFRAIQLTTYETLKTLYS-RLRNARRVAAGLDPL-------------------EGAEAGK----LSGLEGAVLGAVAGSFSAGVTTPLDVIKTRMMMG----GGAAGRSVLDVTRALVEKEGPMAVWKGLVPRVTYVGPSVAIFFMTYEVVK 263          
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: A0A7S2V2B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B5_9STRA)

HSP 1 Score: 120 bits (302), Expect = 9.090e-28
Identity = 84/222 (37.84%), Postives = 117/222 (52.70%), Query Frame = 0
Query:   41 IPRVMAYCVAACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLS-IFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALARALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLMAGAPPSSGVGGGAFVAQTWAGAIGQGGLFAGIGTRIFYIGASGATFFVVYEAMKTRL 261
            I +   Y +AAC+GD+TG+ WLVP EVVK ++Q G+ +     T+S ++R  GL GFY G+  Q+ RDVPFR IQL +YE ++ A    + N                      RR     +E EE       +S  +  +LG+ AG+ SA  T PLDVI+TR+M  A   S V     VA +   + G  GLF G+G R+ YI  S A FF  YE ++ R+
Sbjct:  257 INQTFIYLIAACMGDITGSFWLVPSEVVKQKMQTGAMSQGLGGTVSAVWREKGLGGFYAGYSSQISRDVPFRAIQLVSYETVKSAYLRWRSN----------------------RRAAAGLKEQEE-------LSGVEGVILGAIAGSFSAACTTPLDVIKTRMMTEATGQSVVE----VASSLLQSGGVQGLFRGLGARVGYIAPSAAIFFCTYELVRQRI 445          
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: M2Y040_GALSU (Mitochondrial carrier (BOU / S-adenosylmethionine carrier) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y040_GALSU)

HSP 1 Score: 114 bits (285), Expect = 4.330e-26
Identity = 82/219 (37.44%), Postives = 113/219 (51.60%), Query Frame = 0
Query:   49 VAACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLSIFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALARALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLMAGAPPSSGVGGGAFVAQTWAGA---IGQGGLFA---GIGTRIFYIGASGATFFVVYEAMKTRL 261
            +AA +GD+TG+LWL P EVVK ++Q G ++   +A   IF   GL GFYQG+ GQ+ RD+PFR IQL +YE LR      K+ S+                                       +S  +  ++G  +G+++A +T PLDV++TRLM       GV   A+ +  W  A   +   GL A   G+G R+FYIG SGA FFVVYE MK  L
Sbjct:  155 LAAIMGDLTGSLWLCPSEVVKSRLQAGQYSNTLDAIRKIFMTQGLKGFYQGYVGQIARDIPFRAIQLLSYEELRWRYRQWKKLSS------------------------------------IEDLSNIENLVIGLVSGSVTAAVTTPLDVLKTRLMT---QPIGVSTIAY-SSAWDCARQLVQHEGLQAFWKGLGPRVFYIGPSGAIFFVVYEGMKRML 333          
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: A0A5J4YTC7_PORPP (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTC7_PORPP)

HSP 1 Score: 114 bits (284), Expect = 1.090e-25
Identity = 83/237 (35.02%), Postives = 112/237 (47.26%), Query Frame = 0
Query:   41 IPRVMAYCVAACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLSIFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALARALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLMAGAPPSSGVGGGAF-VAQTWAGAIGQGGLFAGIGTRIFYIGASGATFFVVYEAMKTRLALARKAGPNAKDVRA 276
            +P  +   + ACLGD+TG+LWL P E +K  +Q G H ++ EA    ++N GL GFYQG+ GQ+ RDVPFR IQL+ YE ++                          ARA                 K       D  ++G+ AG++S+V+T PLDVI+TRLM     S+ V   A         A G G L  G+  R+ YI  S A FF VYEA    +   R A   +   RA
Sbjct:  133 MPSELRVMLGACLGDLTGSLWLCPAERIKQTLQSGVHGSVLEAVRKTYKNGGLPGFYQGYSGQIGRDVPFRIIQLSVYEKIKAM-----------------------YARAY---------------LKEREAVTTDNLIIGALAGSISSVLTAPLDVIKTRLMTDQGGSARVYKNALDCVVKIVRAEGPGVLARGVVPRVIYITPSVAIFFAVYEATLRFIRNRRAAADPSAATRA 331          
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: A0A1X6PJV1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJV1_PORUM)

HSP 1 Score: 113 bits (283), Expect = 1.680e-25
Identity = 82/222 (36.94%), Postives = 112/222 (50.45%), Query Frame = 0
Query:   40 EIPRVMAYCVAACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLSIFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALARALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLMAGAPPSSGVGGGAFVAQTWAGAIGQGGLFAGIGTRIFYIGASGATFFVVYEAMKTRL 261
             +P       AA +GD+TG+LWL P E++K ++Q G           ++   G   FYQG+  QV RDVPFR IQL TYE LR A    K           A+  G+A+A                     ++VS  +  LLG+AAG+ +A +T PLDV++TR+M  A   + VGG   V +      G  GL  G+G R+ YIG S A FF V+E +K RL
Sbjct:  149 RLPPAWRTAAAAVVGDVTGSLWLTPGELIKQKVQAGGAGGAVGVARRMWAAGGAGAFYQGYASQVARDVPFRVIQLVTYEELRRAYVGAKARR--------ARPAGAAVAPXXXX-------XXXXXXAPKVAVSGVEGMLLGAAAGSFTAAVTTPLDVVKTRMMT-AEVGALVGGVPGVVRQVVREEGLRGLARGMGPRVVYIGPSCAIFFAVFEGVKGRL 354          
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: A0A7S1TL60_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TL60_9RHOD)

HSP 1 Score: 100 bits (250), Expect = 1.720e-21
Identity = 78/239 (32.64%), Postives = 111/239 (46.44%), Query Frame = 0
Query:   39 QEIPRVMAYCVAACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLSIFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALARALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLMAGAPPS-----SGVGGGAFVAQTWAGAIGQGG---LFAGIGTRIFYIGASGATFFVVYEAMKTRLALARKAGP 269
            Q +P  +   +AA   D+ G+ WL P EVVK Q+Q G H ++  AT SI    G    YQG+ GQ+ RDVPFR + L+ YE +R   T                                  RE E G     +++  D+  LG+AAG+++A +T PLDV++TRLM  A  S     +G          ++  + +GG   LF G   R+ Y+    A FF VYEA  +R+   R   P
Sbjct:   84 QAVPEQLRIVLAAVAADICGSFWLAPAEVVKQQVQAGLHPSVLTATSSILARGGPLALYQGYLGQISRDVPFRVLLLSVYERIRRRYT----------------------------------REWEPG----RALTPRDSLALGAAAGSVAAAVTTPLDVVKTRLMTDASASLRREFAGP------LDCFSQLLRKGGPKELFRGFVPRLLYLTPGLAIFFAVYEATLSRITRPRPQSP 278          
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: F0YC20_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC20_AURAN)

HSP 1 Score: 99.0 bits (245), Expect = 3.140e-21
Identity = 73/207 (35.27%), Postives = 98/207 (47.34%), Query Frame = 0
Query:   50 AACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLSIFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALARALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLMAGAPPSSGVGGGAFVAQTWAGAIGQGGLFAGIGTRIFYIGASGATFFVVYEA 256
            AA +GD  G LWLVP EV+K ++Q G H  +  A  + +R  GL GFY G  GQ++RD+PFRCIQ+T YE LR                     RGSA                                ++G+A G  +A+IT P+D+++TR+M           G+ VA  +A   G  G + G   R  Y+G S A FFVVYEA
Sbjct:   80 AAVVGDALGALWLVPHEVLKQRLQTGVHGALGAAVAATWRTGGLLGFYSGLRGQLLRDIPFRCIQMTLYESLR--------------------GRGSA-------------------------------GVVGAAVGTATALITTPMDLVKTRVMVTDGRL-----GSVVADVYA-REGVAGFWRGALHRAAYVGPSTAIFFVVYEA 229          
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: A0A1X6NJF7_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJF7_PORUM)

HSP 1 Score: 99.4 bits (246), Expect = 1.440e-20
Identity = 83/222 (37.39%), Postives = 108/222 (48.65%), Query Frame = 0
Query:   45 MAYCVAACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLSIFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALARALGRRGGDRAREG--EEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLM---AGAPPSSGVGGGAFVAQTWAGAIGQGGLFAGIGTRIFYIGASGATFFVVYEAMKTRL 261
            +A+ +AA  GD+  +    PFEVVK ++Q G HAT A+A  S++R  G  GFY G+G  V+R++PF  +Q   YE L                    KTR +A           RAR G   EG  +    SA      GSAAGA+SA +T PLDV++TR+M   AG  P  GV  G        GA     L AG+  R+ +I   GA FF  YE  K  L
Sbjct:  131 VAHMLAAAGGDVASSTVRAPFEVVKQRLQAGLHATSADAVRSVWRTSGARGFYAGYGSLVLRELPFDALQFPLYEAL--------------------KTRWAA----------SRARAGYPNEGRLQTWQTSAC-----GSAAGAVSAAVTTPLDVVKTRMMTQKAGTVPYKGVVDGLSRIAREEGAAA---LAAGMLPRVVWIALGGAIFFGGYEVTKAHL 314          
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Match: A0A2V3IGN9_9FLOR (Putative S-adenosylmethionine carrier 2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGN9_9FLOR)

HSP 1 Score: 93.6 bits (231), Expect = 1.270e-18
Identity = 69/217 (31.80%), Postives = 97/217 (44.70%), Query Frame = 0
Query:   45 MAYCVAACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLSIFRNFGLAGFYQGFGGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALARALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIRTRLMA---GAPPSSGVGGGAFVAQTWAGAIGQGGLFAGIGTRIFYIGASGATFFVVYEAMK 258
            + + VAA  GD+ G+    PFEVVK ++Q G ++ +  A        GL GFY G+G  V+R++PF  IQ   YE L+     RKR                                          +   + ++ GS AGA+SA +T PLDV++TRLM     AP  +G+  G     T A   G   L AG+  R+ +I   GA FF  +EA K
Sbjct:  109 LCHVVAAAAGDVAGSTVRAPFEVVKQRLQSGLYSGVGAAVRGTLAKEGLGGFYTGYGSLVLRELPFDAIQFPLYEYLKTVAMRRKRGG---------------------------------------QLETWETSVCGSIAGAISAALTTPLDVVKTRLMTQNVAAPKYNGIVHGI---STIAREEGAKALMAGVIPRVMWISLGGAVFFGAFEAAK 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8760.16293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ20_ECTSI2.870e-6955.04Mitochondrial carrier protein, putative n=2 Tax=Ec... [more]
A0A6V1WYU8_HETAK5.810e-2837.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V2B5_9STRA9.090e-2837.84Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
M2Y040_GALSU4.330e-2637.44Mitochondrial carrier (BOU / S-adenosylmethionine ... [more]
A0A5J4YTC7_PORPP1.090e-2535.02S-adenosylmethionine carrier 1, chloroplastic/mito... [more]
A0A1X6PJV1_PORUM1.680e-2536.94Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TL60_9RHOD1.720e-2132.64Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
F0YC20_AURAN3.140e-2135.27Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A1X6NJF7_PORUM1.440e-2037.39Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A2V3IGN9_9FLOR1.270e-1831.80Putative S-adenosylmethionine carrier 2, chloropla... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 174..261
e-value: 6.2E-13
score: 48.5
coord: 44..125
e-value: 1.4E-11
score: 44.1
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 173..260
score: 14.296
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 42..124
score: 15.841
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 28..154
e-value: 2.3E-14
score: 54.8
coord: 157..273
e-value: 5.5E-14
score: 53.5
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 28..256
NoneNo IPR availablePANTHERPTHR45667FAMILY NOT NAMEDcoord: 39..264
NoneNo IPR availableTMHMMTMhelixcoord: 232..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8760contigH-elongata_contig8760:7462..9303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8760.16293.1mRNA_H-elongata_contig8760.16293.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8760 7354..9811 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8760.16293.1 ID=prot_H-elongata_contig8760.16293.1|Name=mRNA_H-elongata_contig8760.16293.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=277bp
MFSIRCSSLDTSSPVVPRALNLVDLSLPHLTGPMGPSPQEIPRVMAYCVA
ACLGDMTGNLWLVPFEVVKVQIQGGSHATIAEATLSIFRNFGLAGFYQGF
GGQVVRDVPFRCIQLTTYELLRVAVTTRKRNSTARATGFDAKTRGSALAR
ALGRRGGDRAREGEEGGNKFLSVSAADAALLGSAAGALSAVITCPLDVIR
TRLMAGAPPSSGVGGGAFVAQTWAGAIGQGGLFAGIGTRIFYIGASGATF
FVVYEAMKTRLALARKAGPNAKDVRA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf